RNA–Protein interactions for RNA: ENST00000507009.5

GYPB-208, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 388 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-208ENST00000507009 C7orf50Q9BRJ6 194 aaKnown RBP4.1□□□□□ -1.75
GYPB-208ENST00000507009 PDCD10Q9BUL8 212 aa4.1□□□□□ -1.75
GYPB-208ENST00000507009 C1QTNF4Q9BXJ3 329 aa4.1□□□□□ -1.75
GYPB-208ENST00000507009 RNF167Q9H6Y7 350 aa4.1□□□□□ -1.75
GYPB-208ENST00000507009 AUNIPQ9H7T9 357 aa4.1□□□□□ -1.75
GYPB-208ENST00000507009 DIABLOQ9NR28 239 aa4.1□□□□□ -1.75
GYPB-208ENST00000507009 TXNL4BQ9NX01 149 aaKnown RBP4.1□□□□□ -1.75
GYPB-208ENST00000507009 MRPL36Q9P0J6 103 aaKnown RBP4.1□□□□□ -1.75
GYPB-208ENST00000507009 SSR3Q9UNL2 185 aa4.1□□□□□ -1.75
GYPB-208ENST00000507009 LOC100506127A0A0U1RQW1 187 aa4.09□□□□□ -1.75
GYPB-208ENST00000507009 LOC102723971A0A1B0GUV8 181 aa4.09□□□□□ -1.75
GYPB-208ENST00000507009 RPS10-NUDT3A0A1W2PQS6 291 aa4.09□□□□□ -1.75
GYPB-208ENST00000507009 FAM90A26D6RGX4 464 aa4.09□□□□□ -1.75
GYPB-208ENST00000507009 ANKRD65E5RJM6 399 aa4.09□□□□□ -1.75
GYPB-208ENST00000507009 H3BMM0 161 aa4.09□□□□□ -1.75
GYPB-208ENST00000507009 SCGB2A1O75556 95 aa4.09□□□□□ -1.75
GYPB-208ENST00000507009 NUDT3O95989 172 aa4.09□□□□□ -1.75
GYPB-208ENST00000507009 PI3P19957 117 aa4.09□□□□□ -1.75
GYPB-208ENST00000507009 CRYBB3P26998 211 aa4.09□□□□□ -1.75
GYPB-208ENST00000507009 HLA-DMAP28067 261 aa4.09□□□□□ -1.75
GYPB-208ENST00000507009 S100GP29377 79 aa4.09□□□□□ -1.75
GYPB-208ENST00000507009 FGF9P31371 208 aaPredicted RBP4.09□□□□□ -1.75
GYPB-208ENST00000507009 CBX5P45973 191 aa4.09□□□□□ -1.75
GYPB-208ENST00000507009 HSPE1P61604 102 aaKnown RBP4.09□□□□□ -1.75
GYPB-208ENST00000507009 DAD1P61803 113 aa4.09□□□□□ -1.75
GYPB-208ENST00000507009 TSPAN5P62079 268 aa4.09□□□□□ -1.75
GYPB-208ENST00000507009 SNRPD3P62318 126 aaKnown RBP4.09□□□□□ -1.75
GYPB-208ENST00000507009 DLK1P80370 383 aa4.09□□□□□ -1.75
GYPB-208ENST00000507009 SRSF3P84103 164 aaKnown RBP4.09□□□□□ -1.75
GYPB-208ENST00000507009 SPATA12Q7Z6I5 190 aa4.09□□□□□ -1.75
GYPB-208ENST00000507009 Q8N1X5 172 aa4.09□□□□□ -1.75
GYPB-208ENST00000507009 C6orf223Q8N319 242 aa4.09□□□□□ -1.75
GYPB-208ENST00000507009 OR4B1Q8NGF8 309 aa4.09□□□□□ -1.75
GYPB-208ENST00000507009 OR6F1Q8NGZ6 308 aa4.09□□□□□ -1.75
GYPB-208ENST00000507009 RNASE11Q8TAA1 199 aaKnown RBP4.09□□□□□ -1.75
GYPB-208ENST00000507009 DCANP1Q8TF63 244 aa4.09□□□□□ -1.75
GYPB-208ENST00000507009 CLUHP3Q96NS8 147 aa4.09□□□□□ -1.75
GYPB-208ENST00000507009 YTHDF1Q9BYJ9 559 aaKnown RBP4.09□□□□□ -1.75
GYPB-208ENST00000507009 ENY2Q9NPA8 101 aa4.09□□□□□ -1.75
GYPB-208ENST00000507009 RFNGQ9Y644 331 aa4.09□□□□□ -1.75
GYPB-208ENST00000507009 HERC1Q15751 4861 aa4.08□□□□□ -1.76
GYPB-208ENST00000507009 TMEM189A5PLL7 270 aa4.08□□□□□ -1.76
GYPB-208ENST00000507009 CLN5O75503 358 aa4.08□□□□□ -1.76
GYPB-208ENST00000507009 IGKV1-39P01597 117 aa4.08□□□□□ -1.76
GYPB-208ENST00000507009 IGKV1D-39P04432 117 aa4.08□□□□□ -1.76
GYPB-208ENST00000507009 HNRNPCP07910 306 aaKnown RBP eCLIP4.08□□□□□ -1.76
GYPB-208ENST00000507009 RNASE2P10153 161 aaKnown RBP4.08□□□□□ -1.76
GYPB-208ENST00000507009 PGAM2P15259 253 aa4.08□□□□□ -1.76
GYPB-208ENST00000507009 HRH1P35367 487 aa4.08□□□□□ -1.76
GYPB-208ENST00000507009 ETV6P41212 452 aa4.08□□□□□ -1.76
GYPB-208ENST00000507009 HSPA13P48723 471 aa4.08□□□□□ -1.76
GYPB-208ENST00000507009 AKR1C2P52895 323 aa4.08□□□□□ -1.76
GYPB-208ENST00000507009 SUB1P53999 127 aaKnown RBP eCLIP4.08□□□□□ -1.76
GYPB-208ENST00000507009 RNF212Q495C1 297 aa4.08□□□□□ -1.76
GYPB-208ENST00000507009 GDF5OSQ5U4N7 250 aa4.08□□□□□ -1.76
GYPB-208ENST00000507009 C16orf54Q6UWD8 224 aa4.08□□□□□ -1.76
GYPB-208ENST00000507009 ZNF114Q8NC26 417 aa4.08□□□□□ -1.76
GYPB-208ENST00000507009 COQ8AQ8NI60 647 aa4.08□□□□□ -1.76
GYPB-208ENST00000507009 Q8WTZ3 238 aa4.08□□□□□ -1.76
GYPB-208ENST00000507009 SEC22AQ96IW7 307 aa4.08□□□□□ -1.76
GYPB-208ENST00000507009 FAM210BQ96KR6 192 aa4.08□□□□□ -1.76
GYPB-208ENST00000507009 TMEM208Q9BTX3 173 aa4.08□□□□□ -1.76
GYPB-208ENST00000507009 SLC35B3Q9H1N7 401 aa4.08□□□□□ -1.76
GYPB-208ENST00000507009 FNDC4Q9H6D8 234 aaPredicted RBP4.08□□□□□ -1.76
GYPB-208ENST00000507009 DKK2Q9UBU2 259 aa4.08□□□□□ -1.76
GYPB-208ENST00000507009 GOLT1BQ9Y3E0 138 aa4.08□□□□□ -1.76
GYPB-208ENST00000507009 YTHDF2Q9Y5A9 579 aaKnown RBP4.08□□□□□ -1.76
GYPB-208ENST00000507009 NBDYA0A0U1RRE5 68 aa4.07□□□□□ -1.76
GYPB-208ENST00000507009 TEX48A0A1B0GUV7 120 aa4.07□□□□□ -1.76
GYPB-208ENST00000507009 SMIM9A6NGZ8 99 aa4.07□□□□□ -1.76
GYPB-208ENST00000507009 ZNF705FA8MVS1 300 aaPredicted RBP4.07□□□□□ -1.76
GYPB-208ENST00000507009 F5H768 121 aa4.07□□□□□ -1.76
GYPB-208ENST00000507009 F6UB75 175 aa4.07□□□□□ -1.76
GYPB-208ENST00000507009 CORTO00230 105 aa4.07□□□□□ -1.76
GYPB-208ENST00000507009 NXPH3O95157 252 aa4.07□□□□□ -1.76
GYPB-208ENST00000507009 HBE1P02100 147 aa4.07□□□□□ -1.76
GYPB-208ENST00000507009 IL4P05112 153 aa4.07□□□□□ -1.76
GYPB-208ENST00000507009 ZNF705DP0CH99 300 aaPredicted RBP4.07□□□□□ -1.76
GYPB-208ENST00000507009 ZNF705BP0CI00 300 aaPredicted RBP4.07□□□□□ -1.76
GYPB-208ENST00000507009 DEFB130BP0DP73 79 aa4.07□□□□□ -1.76
GYPB-208ENST00000507009 DEFB130AP0DP74 79 aa4.07□□□□□ -1.76
GYPB-208ENST00000507009 HLA-DRB4P13762 266 aa4.07□□□□□ -1.76
GYPB-208ENST00000507009 RND2P52198 227 aa4.07□□□□□ -1.76
GYPB-208ENST00000507009 AP2S1P53680 142 aaPredicted RBP4.07□□□□□ -1.76
GYPB-208ENST00000507009 TAS2R46P59540 309 aa4.07□□□□□ -1.76
GYPB-208ENST00000507009 TAS2R20P59543 309 aa4.07□□□□□ -1.76
GYPB-208ENST00000507009 DHODHQ02127 395 aa4.07□□□□□ -1.76
GYPB-208ENST00000507009 USF2Q15853 346 aaPredicted RBP4.07□□□□□ -1.76
GYPB-208ENST00000507009 RRN3P1Q2M238 152 aa4.07□□□□□ -1.76
GYPB-208ENST00000507009 TRIM16LQ309B1 348 aa4.07□□□□□ -1.76
GYPB-208ENST00000507009 KCTD21Q4G0X4 260 aa4.07□□□□□ -1.76
GYPB-208ENST00000507009 RNASE12Q5GAN4 147 aaKnown RBP4.07□□□□□ -1.76
GYPB-208ENST00000507009 TMEM69Q5SWH9 247 aa4.07□□□□□ -1.76
GYPB-208ENST00000507009 DHRS11Q6UWP2 260 aa4.07□□□□□ -1.76
GYPB-208ENST00000507009 SIGLEC15Q6ZMC9 328 aa4.07□□□□□ -1.76
GYPB-208ENST00000507009 ZNF705AQ6ZN79 300 aaPredicted RBP4.07□□□□□ -1.76
GYPB-208ENST00000507009 GLMPQ8WWB7 406 aa4.07□□□□□ -1.76
GYPB-208ENST00000507009 NRG4Q8WWG1 115 aa4.07□□□□□ -1.76
GYPB-208ENST00000507009 ACY3Q96HD9 319 aa4.07□□□□□ -1.76
GYPB-208ENST00000507009 PBDC1Q9BVG4 233 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms