RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 CXorf58Q96LI9 332 aa6.77□□□□□ -1.33
SCAMP1-202ENST00000506858 KRTAP17-1Q9BYP8 105 aa6.77□□□□□ -1.33
SCAMP1-202ENST00000506858 CACFD1Q9UGQ2 172 aa6.77□□□□□ -1.33
SCAMP1-202ENST00000506858 SMCO3A2RU48 225 aa6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 M0QZ24 198 aa6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 TGOLN2O43493 480 aa6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 TSC22D2O75157 780 aa6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 RLN2P04090 185 aa6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 GIPP09681 153 aaPredicted RBP6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 RUNX1Q01196 453 aa6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 UNQ9165/PRO28630Q6UXU0 137 aa6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 LINC00482Q8N8I6 264 aa6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 OR4F17Q8NGA8 305 aa6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 RNASEH2CQ8TDP1 164 aaKnown RBP6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 OR4F4Q96R69 305 aa6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 SMIM3Q9BZL3 60 aa6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 IGKV1OR2-108A0A075B7D4 117 aa6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 IGHV3-49A0A0A0MS15 119 aa6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 TRBV7-1A0A0A6YYK4 115 aa6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 ZNF320A2RRD8 509 aa6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 E5RGE8 158 aa6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 GNG7O60262 68 aa6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 IGKV1-17P01599 117 aa6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 PVALBP20472 110 aaPredicted RBP6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 GATA2P23769 480 aaPredicted RBP6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 MYCNOSP40205 109 aa6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 TAS2R30P59541 319 aa6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 ZNF90Q03938 601 aa6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 OR2F1Q13607 317 aa6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 FHL3Q13643 280 aa6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 RPEL1Q2QD12 228 aa6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 TMEM182Q6ZP80 229 aaPredicted RBP6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 RCC1LQ96I51 464 aaKnown RBP6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 ST6GAL2Q96JF0 529 aa6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 LYRM2Q9NU23 88 aaPredicted RBP6.76□□□□□ -1.33
SCAMP1-202ENST00000506858 IGKV1D-37A0A075B6S9 117 aa6.75□□□□□ -1.33
SCAMP1-202ENST00000506858 IGHV3OR16-13A0A075B7E8 117 aa6.75□□□□□ -1.33
SCAMP1-202ENST00000506858 FXYD6-FXYD2A0A087WZ82 144 aa6.75□□□□□ -1.33
SCAMP1-202ENST00000506858 IGHV3-74A0A0B4J1X5 117 aa6.75□□□□□ -1.33
SCAMP1-202ENST00000506858 CORTO00230 105 aa6.75□□□□□ -1.33
SCAMP1-202ENST00000506858 GGCTO75223 188 aaKnown RBP6.75□□□□□ -1.33
SCAMP1-202ENST00000506858 CLN5O75503 358 aa6.75□□□□□ -1.33
SCAMP1-202ENST00000506858 YIF1AO95070 293 aa6.75□□□□□ -1.33
SCAMP1-202ENST00000506858 IGLC1P0CG04 106 aa6.75□□□□□ -1.33
SCAMP1-202ENST00000506858 IGLL1P15814 213 aa6.75□□□□□ -1.33
SCAMP1-202ENST00000506858 GPX4P36969 197 aaPredicted RBP6.75□□□□□ -1.33
SCAMP1-202ENST00000506858 RAP2BP61225 183 aa6.75□□□□□ -1.33
SCAMP1-202ENST00000506858 RPP30P78346 268 aaKnown RBP6.75□□□□□ -1.33
SCAMP1-202ENST00000506858 EWSR1Q01844 656 aaKnown RBP eCLIP6.75□□□□□ -1.33
SCAMP1-202ENST00000506858 SLC38A11Q08AI6 406 aa6.75□□□□□ -1.33
SCAMP1-202ENST00000506858 KLF5Q13887 457 aaPredicted RBP6.75□□□□□ -1.33
SCAMP1-202ENST00000506858 CLINT1Q14677 625 aa6.75□□□□□ -1.33
SCAMP1-202ENST00000506858 TM4SF20Q53R12 229 aa6.75□□□□□ -1.33
SCAMP1-202ENST00000506858 NOXA1Q86UR1 476 aa6.75□□□□□ -1.33
SCAMP1-202ENST00000506858 OR11H4Q8NGC9 324 aa6.75□□□□□ -1.33
SCAMP1-202ENST00000506858 OR10P1Q8NGE3 313 aa6.75□□□□□ -1.33
SCAMP1-202ENST00000506858 OR4X1Q8NH49 305 aa6.75□□□□□ -1.33
SCAMP1-202ENST00000506858 THAP6Q8TBB0 222 aa6.75□□□□□ -1.33
SCAMP1-202ENST00000506858 CACNG8Q8WXS5 425 aa6.75□□□□□ -1.33
SCAMP1-202ENST00000506858 SLC35E1Q96K37 410 aa6.75□□□□□ -1.33
SCAMP1-202ENST00000506858 C20orf24Q9BUV8 137 aa6.75□□□□□ -1.33
SCAMP1-202ENST00000506858 RFNGQ9Y644 331 aa6.75□□□□□ -1.33
SCAMP1-202ENST00000506858 RPS10-NUDT3A0A1W2PQS6 291 aa6.74□□□□□ -1.33
SCAMP1-202ENST00000506858 NUPL2O15504 423 aaKnown RBP6.74□□□□□ -1.33
SCAMP1-202ENST00000506858 RPL12P30050 165 aaKnown RBP6.74□□□□□ -1.33
SCAMP1-202ENST00000506858 OR10J1P30954 320 aa6.74□□□□□ -1.33
SCAMP1-202ENST00000506858 P2RY1P47900 373 aa6.74□□□□□ -1.33
SCAMP1-202ENST00000506858 NPBWR1P48145 328 aa6.74□□□□□ -1.33
SCAMP1-202ENST00000506858 AP2S1P53680 142 aaPredicted RBP6.74□□□□□ -1.33
SCAMP1-202ENST00000506858 AKR1C1Q04828 323 aa6.74□□□□□ -1.33
SCAMP1-202ENST00000506858 C1QL4Q86Z23 238 aa6.74□□□□□ -1.33
SCAMP1-202ENST00000506858 TMEM116Q8NCL8 245 aa6.74□□□□□ -1.33
SCAMP1-202ENST00000506858 WFDC1Q9HC57 220 aa6.74□□□□□ -1.33
SCAMP1-202ENST00000506858 IGHV3-66A0A0C4DH42 116 aa6.73□□□□□ -1.33
SCAMP1-202ENST00000506858 SCO2A0A1W2PP80 73 aa6.73□□□□□ -1.33
SCAMP1-202ENST00000506858 ZFP92A6NM28 416 aa6.73□□□□□ -1.33
SCAMP1-202ENST00000506858 OVOL1O14753 267 aa6.73□□□□□ -1.33
SCAMP1-202ENST00000506858 SLC25A4P12235 298 aa6.73□□□□□ -1.33
SCAMP1-202ENST00000506858 LYL1P12980 280 aa6.73□□□□□ -1.33
SCAMP1-202ENST00000506858 SULT1A1P50225 295 aa6.73□□□□□ -1.33
SCAMP1-202ENST00000506858 ATP5IP56385 69 aaPredicted RBP6.73□□□□□ -1.33
SCAMP1-202ENST00000506858 LCE1DQ5T752 114 aa6.73□□□□□ -1.33
SCAMP1-202ENST00000506858 TOMM20LQ6UXN7 152 aa6.73□□□□□ -1.33
SCAMP1-202ENST00000506858 IL34Q6ZMJ4 242 aa6.73□□□□□ -1.33
SCAMP1-202ENST00000506858 ADAMTSL5Q6ZMM2 481 aa6.73□□□□□ -1.33
SCAMP1-202ENST00000506858 OR5C1Q8NGR4 320 aa6.73□□□□□ -1.33
SCAMP1-202ENST00000506858 MRPL18Q9H0U6 180 aaKnown RBP6.73□□□□□ -1.33
SCAMP1-202ENST00000506858 PUS1Q9Y606 427 aaKnown RBP eCLIP6.73□□□□□ -1.33
SCAMP1-202ENST00000506858 SORL1Q92673 2214 aa6.73□□□□□ -1.33
SCAMP1-202ENST00000506858 UBE2L5PA0A1B0GUS4 154 aa6.72□□□□□ -1.33
SCAMP1-202ENST00000506858 APOHP02749 345 aaPredicted RBP6.72□□□□□ -1.33
SCAMP1-202ENST00000506858 PSG1P11464 419 aa6.72□□□□□ -1.33
SCAMP1-202ENST00000506858 ZP3P21754 424 aa6.72□□□□□ -1.33
SCAMP1-202ENST00000506858 FCGR2BP31994 310 aaPredicted RBP6.72□□□□□ -1.33
SCAMP1-202ENST00000506858 ETFRF1Q6IPR1 90 aa6.72□□□□□ -1.33
SCAMP1-202ENST00000506858 ZNF546Q86UE3 836 aa6.72□□□□□ -1.33
SCAMP1-202ENST00000506858 STX12Q86Y82 276 aa6.72□□□□□ -1.33
SCAMP1-202ENST00000506858 Q8N3U1 123 aa6.72□□□□□ -1.33
SCAMP1-202ENST00000506858 LILRB2Q8N423 598 aa6.72□□□□□ -1.33
SCAMP1-202ENST00000506858 TXN2Q99757 166 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms