RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 TSNAXQ99598 290 aaKnown RBP1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 AGMATQ9BSE5 352 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 ARL6Q9H0F7 186 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 FXYD6Q9H0Q3 95 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 OR2D2Q9H210 308 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 PPDPFQ9H3Y8 114 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 FKBP11Q9NYL4 201 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 IDI2-AS1Q9NZ38 188 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 OR1A1Q9P1Q5 309 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 TNFSF18Q9UNG2 199 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 AMMECR1Q9Y4X0 333 aaPredicted RBP1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 WSB1Q9Y6I7 421 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 DCHS1Q96JQ0 3298 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 IGF2RP11717 2491 aa1.73□□□□□ -2.13
TOPBP1-205ENST00000506779 TEP1Q99973 2627 aaKnown RBP1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 DMXL1Q9Y485 3027 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 KIAA1549Q9HCM3 1950 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 TEX15Q9BXT5 2789 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 IGHV3OR15-7A0A075B7D8 119 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 TRAV14DV4A0A0A6YYC5 116 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 IGHV7-81A0A0B4J1V7 117 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 TRAV39A0A0B4J263 110 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 PPIAL4CA0A0B4J2A2 164 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 IGKV1D-13A0A0B4J2D9 117 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 WI2-2373I1.2A0A1W2PRP0 233 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 C17orf98A8MV24 154 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 LEUTXA8MZ59 168 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 OOSP1A8MZH6 123 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 UMAD1C9J7I0 102 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 SMLR1H3BR10 107 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 M0R1W7 72 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 M0R1X1 148 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 SYNGR2O43760 224 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 ENSAO43768 121 aaKnown RBP1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 FOXH1O75593 365 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 KRASP01116 189 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 IFNA5P01569 189 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 IFNA17P01571 189 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 IGHV3-48P01763 117 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 GAPDHP04406 335 aaKnown RBP1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 IGF1P05019 195 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 SOD3P08294 240 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 PPIAL4GP0DN37 164 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 IGHV1-8P0DP01 117 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 IGKV1-13P0DP09 117 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 COX6B1P14854 86 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 NQO2P16083 231 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 OMGP23515 440 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 NFYBP25208 207 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 HTR1DP28221 377 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 SSTR5P35346 364 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 PPP1CCP36873 323 aaKnown RBP1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 LPAR6P43657 344 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 GPR6P46095 362 aaPredicted RBP1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 LGALS7P47929 136 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 SULT1A1P50225 295 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 CAV2P51636 162 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 NKX2-5P52952 324 aaPredicted RBP1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 SUB1P53999 127 aaKnown RBP eCLIP1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 SPCS3P61009 180 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 RAB11AP62491 216 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 IL15RAQ13261 267 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 RAB31Q13636 194 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 LAGE3Q14657 143 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 AANATQ16613 207 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 ATP6V1FQ16864 119 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 TMEM41BQ5BJD5 291 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 Q5BKY6 102 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 NMSQ5H8A3 153 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 CT45A1Q5HYN5 189 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 CLLU1Q5K131 121 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 NCR3LG1Q68D85 454 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 LAMTOR1Q6IAA8 161 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 OR8G2PQ6IF36 304 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 C11orf71Q6IPW1 123 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 SLC25A24Q6NUK1 477 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 CLEC2AQ6UVW9 174 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 SLC25A48Q6ZT89 311 aaKnown RBP1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 HSD17B13Q7Z5P4 300 aaPredicted RBP1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF429Q86V71 674 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 PPP1R27Q86WC6 154 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 PDPNQ86YL7 162 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 TGIF2LXQ8IUE1 241 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 BAP18Q8IXM2 172 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 PDZD9Q8IXQ8 264 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 ZCCHC24Q8N2G6 241 aaKnown RBP1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 LINC00311Q8N616 119 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 KIR3DL3Q8N743 410 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 FAM216BQ8N7L0 139 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 TPRX1Q8N7U7 411 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 UBAC2Q8NBM4 344 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 ZNF680Q8NEM1 530 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 OR4D5Q8NGN0 318 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 OR4C13Q8NGP0 309 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 OR1S2Q8NGQ3 325 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 OR5B3Q8NH48 314 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 OR4A5Q8NH83 315 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 OR1L1Q8NH94 360 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 CT45A3Q8NHU0 189 aa1.72□□□□□ -2.13
TOPBP1-205ENST00000506779 STOML3Q8TAV4 291 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms