RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 TOMM20LQ6UXN7 152 aa12.57□□□□□ -0.4
SNCA-209ENST00000506244 Q8N1Y9 231 aa12.57□□□□□ -0.4
SNCA-209ENST00000506244 NARS2Q96I59 477 aaKnown RBP12.57□□□□□ -0.4
SNCA-209ENST00000506244 NEURL2Q9BR09 285 aa12.57□□□□□ -0.4
SNCA-209ENST00000506244 TMEM231Q9H6L2 316 aa12.57□□□□□ -0.4
SNCA-209ENST00000506244 ZFAND3Q9H8U3 227 aa12.57□□□□□ -0.4
SNCA-209ENST00000506244 GPN1Q9HCN4 374 aaPredicted RBP12.57□□□□□ -0.4
SNCA-209ENST00000506244 MRPL36Q9P0J6 103 aaKnown RBP12.57□□□□□ -0.4
SNCA-209ENST00000506244 SMPXQ9UHP9 88 aa12.57□□□□□ -0.4
SNCA-209ENST00000506244 STRAPQ9Y3F4 350 aaKnown RBP12.57□□□□□ -0.4
SNCA-209ENST00000506244 ZNF785A8K8V0 405 aa12.56□□□□□ -0.4
SNCA-209ENST00000506244 A8MZ25 164 aa12.56□□□□□ -0.4
SNCA-209ENST00000506244 TSPAN4O14817 238 aa12.56□□□□□ -0.4
SNCA-209ENST00000506244 SCAF4O95104 1147 aaKnown RBP12.56□□□□□ -0.4
SNCA-209ENST00000506244 IGKV1-17P01599 117 aa12.56□□□□□ -0.4
SNCA-209ENST00000506244 IGHV4-30-4P0DP06 118 aa12.56□□□□□ -0.4
SNCA-209ENST00000506244 YPEL3P61236 119 aaPredicted RBP12.56□□□□□ -0.4
SNCA-209ENST00000506244 ID3Q02535 119 aa12.56□□□□□ -0.4
SNCA-209ENST00000506244 MLANAQ16655 118 aa12.56□□□□□ -0.4
SNCA-209ENST00000506244 TIGITQ495A1 244 aa12.56□□□□□ -0.4
SNCA-209ENST00000506244 C12orf45Q8N5I9 185 aaPredicted RBP12.56□□□□□ -0.4
SNCA-209ENST00000506244 Q8WTZ3 238 aa12.56□□□□□ -0.4
SNCA-209ENST00000506244 ZNF414Q96IQ9 312 aa12.56□□□□□ -0.4
SNCA-209ENST00000506244 METTL26Q96S19 204 aa12.56□□□□□ -0.4
SNCA-209ENST00000506244 SEC22CQ9BRL7 303 aa12.56□□□□□ -0.4
SNCA-209ENST00000506244 SSSCA1O60232 199 aa12.55□□□□□ -0.4
SNCA-209ENST00000506244 PRAF2O60831 178 aa12.55□□□□□ -0.4
SNCA-209ENST00000506244 SCGB1D2O95969 90 aa12.55□□□□□ -0.4
SNCA-209ENST00000506244 IL5P05113 134 aa12.55□□□□□ -0.4
SNCA-209ENST00000506244 FABP1P07148 127 aa12.55□□□□□ -0.4
SNCA-209ENST00000506244 FRMD6-AS1P0C7T7 363 aa12.55□□□□□ -0.4
SNCA-209ENST00000506244 POLR2GP62487 172 aaKnown RBP eCLIP12.55□□□□□ -0.4
SNCA-209ENST00000506244 SPANXN5Q5MJ07 72 aa12.55□□□□□ -0.4
SNCA-209ENST00000506244 ZBTB8BQ8NAP8 495 aaPredicted RBP12.55□□□□□ -0.4
SNCA-209ENST00000506244 NPIPB3Q92617 1050 aa12.55□□□□□ -0.4
SNCA-209ENST00000506244 RAB40CQ96S21 281 aa12.55□□□□□ -0.4
SNCA-209ENST00000506244 RHPN1-AS1Q9BWJ2 59 aa12.55□□□□□ -0.4
SNCA-209ENST00000506244 TUBA4BQ9H853 241 aa12.55□□□□□ -0.4
SNCA-209ENST00000506244 A0A1W2PS18 150 aa12.54□□□□□ -0.4
SNCA-209ENST00000506244 OR4C46A6NHA9 309 aa12.54□□□□□ -0.4
SNCA-209ENST00000506244 CHEK1O14757 476 aa12.54□□□□□ -0.4
SNCA-209ENST00000506244 NPPCP23582 126 aa12.54□□□□□ -0.4
SNCA-209ENST00000506244 IFITM3Q01628 133 aa12.54□□□□□ -0.4
SNCA-209ENST00000506244 GSKIPQ9P0R6 139 aa12.54□□□□□ -0.4
SNCA-209ENST00000506244 C5orf51A6NDU8 294 aa12.53□□□□□ -0.4
SNCA-209ENST00000506244 ZFP92A6NM28 416 aa12.53□□□□□ -0.4
SNCA-209ENST00000506244 FAM25EA8MYX2 175 aa12.53□□□□□ -0.4
SNCA-209ENST00000506244 H3BP45 60 aa12.53□□□□□ -0.4
SNCA-209ENST00000506244 TOMM40O96008 361 aa12.53□□□□□ -0.4
SNCA-209ENST00000506244 NRARPQ7Z6K4 114 aa12.53□□□□□ -0.4
SNCA-209ENST00000506244 GRAMD2BQ96HH9 432 aa12.53□□□□□ -0.4
SNCA-209ENST00000506244 C19orf73Q9NVV2 129 aa12.53□□□□□ -0.4
SNCA-209ENST00000506244 PSENENQ9NZ42 101 aa12.53□□□□□ -0.4
SNCA-209ENST00000506244 SELENOKQ9Y6D0 94 aa12.53□□□□□ -0.4
SNCA-209ENST00000506244 CCSO14618 274 aa12.52□□□□□ -0.41
SNCA-209ENST00000506244 CD7P09564 240 aa12.52□□□□□ -0.41
SNCA-209ENST00000506244 RD3LP0DJH9 198 aa12.52□□□□□ -0.41
SNCA-209ENST00000506244 NUP62P37198 522 aaPredicted RBP12.52□□□□□ -0.41
SNCA-209ENST00000506244 TAS2R30P59541 319 aa12.52□□□□□ -0.41
SNCA-209ENST00000506244 GAMTQ14353 236 aa12.52□□□□□ -0.41
SNCA-209ENST00000506244 GSG1LQ6UXU4 331 aa12.52□□□□□ -0.41
SNCA-209ENST00000506244 SMIM8Q96KF7 97 aa12.52□□□□□ -0.41
SNCA-209ENST00000506244 RNF2Q99496 336 aa12.52□□□□□ -0.41
SNCA-209ENST00000506244 VSIRQ9H7M9 311 aa12.52□□□□□ -0.41
SNCA-209ENST00000506244 IGHV3-49A0A0A0MS15 119 aa12.51□□□□□ -0.41
SNCA-209ENST00000506244 SNRPGP15A8MWD9 76 aa12.51□□□□□ -0.41
SNCA-209ENST00000506244 OR11H12B2RN74 326 aa12.51□□□□□ -0.41
SNCA-209ENST00000506244 INMT-MINDY4F8WBC2 141 aa12.51□□□□□ -0.41
SNCA-209ENST00000506244 TSC22D2O75157 780 aa12.51□□□□□ -0.41
SNCA-209ENST00000506244 IL4P05112 153 aa12.51□□□□□ -0.41
SNCA-209ENST00000506244 CRYBB3P26998 211 aa12.51□□□□□ -0.41
SNCA-209ENST00000506244 EIF2B2P49770 351 aaKnown RBP12.51□□□□□ -0.41
SNCA-209ENST00000506244 PAFAH1B2P68402 229 aa12.51□□□□□ -0.41
SNCA-209ENST00000506244 OR51G1Q8NGK1 321 aa12.51□□□□□ -0.41
SNCA-209ENST00000506244 ST8SIA2Q92186 375 aa12.51□□□□□ -0.41
SNCA-209ENST00000506244 C2orf50Q96LR7 162 aa12.51□□□□□ -0.41
SNCA-209ENST00000506244 PFDN2Q9UHV9 154 aa12.51□□□□□ -0.41
SNCA-209ENST00000506244 IGHV3OR16-13A0A075B7E8 117 aa12.5□□□□□ -0.41
SNCA-209ENST00000506244 IGHV3-74A0A0B4J1X5 117 aa12.5□□□□□ -0.41
SNCA-209ENST00000506244 PRSS46E5RG02 174 aa12.5□□□□□ -0.41
SNCA-209ENST00000506244 L7N2F9 121 aa12.5□□□□□ -0.41
SNCA-209ENST00000506244 MBPP02686 304 aaPredicted RBP12.5□□□□□ -0.41
SNCA-209ENST00000506244 HNRNPCP07910 306 aaKnown RBP eCLIP12.5□□□□□ -0.41
SNCA-209ENST00000506244 VAMP2P63027 116 aa12.5□□□□□ -0.41
SNCA-209ENST00000506244 AKR1C1Q04828 323 aa12.5□□□□□ -0.41
SNCA-209ENST00000506244 ACOT7LQ6ZUV0 252 aa12.5□□□□□ -0.41
SNCA-209ENST00000506244 TCF24Q7RTU0 167 aa12.5□□□□□ -0.41
SNCA-209ENST00000506244 ZMAT4Q9H898 229 aa12.5□□□□□ -0.41
SNCA-209ENST00000506244 SRD5A3Q9H8P0 318 aa12.5□□□□□ -0.41
SNCA-209ENST00000506244 RCL1Q9Y2P8 373 aaKnown RBP12.5□□□□□ -0.41
SNCA-209ENST00000506244 DNAH9Q9NYC9 4486 aa12.49□□□□□ -0.41
SNCA-209ENST00000506244 CFDP00746 253 aaPredicted RBP12.49□□□□□ -0.41
SNCA-209ENST00000506244 PSG1P11464 419 aa12.49□□□□□ -0.41
SNCA-209ENST00000506244 PVALBP20472 110 aaPredicted RBP12.49□□□□□ -0.41
SNCA-209ENST00000506244 CMC4P56277 68 aaPredicted RBP12.49□□□□□ -0.41
SNCA-209ENST00000506244 SBSPONQ8IVN8 264 aa12.49□□□□□ -0.41
SNCA-209ENST00000506244 DEFB125Q8N687 156 aa12.49□□□□□ -0.41
SNCA-209ENST00000506244 THAP8Q8NA92 274 aa12.49□□□□□ -0.41
SNCA-209ENST00000506244 RNF125Q96EQ8 232 aa12.49□□□□□ -0.41
SNCA-209ENST00000506244 TRGV9Q99603 122 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms