RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 NAA50Q9GZZ1 169 aaKnown RBP2.22□□□□□ -2.05
TCOF1-208ENST00000506063 ZNF430Q9H8G1 570 aaPredicted RBP2.22□□□□□ -2.05
TCOF1-208ENST00000506063 ENY2Q9NPA8 101 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 TMEM140Q9NV12 185 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 MCUBQ9NWR8 336 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 BET1LQ9NYM9 111 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 THYN1Q9P016 225 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 SCP2D1Q9UJQ7 156 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 ELF5Q9UKW6 265 aaPredicted RBP2.22□□□□□ -2.05
TCOF1-208ENST00000506063 PRNDQ9UKY0 176 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 ANAPC10Q9UM13 185 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 ZNF257Q9Y2Q1 563 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 MRPS16Q9Y3D3 137 aaKnown RBP2.22□□□□□ -2.05
TCOF1-208ENST00000506063 S4R3C0 116 aa2.22□□□□□ -2.05
TCOF1-208ENST00000506063 IGHV3-35A0A0C4DH35 117 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 TEX13DA0A0J9YY54 714 aaPredicted RBP2.21□□□□□ -2.06
TCOF1-208ENST00000506063 LINC00473A8K010 186 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 NPIPB5A8MRT5 1133 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 M0QYG6 137 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 ZNF701M0R085 212 aaPredicted RBP2.21□□□□□ -2.06
TCOF1-208ENST00000506063 IGLV2-8P01709 118 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 FGF2P09038 288 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 AKAIN1P0CW23 69 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 PTHLHP12272 177 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 MYOD1P15172 320 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 RPA2P15927 270 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 HIST1H1BP16401 226 aaKnown RBP2.21□□□□□ -2.06
TCOF1-208ENST00000506063 NAT1P18440 290 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 ELK1P19419 428 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 F2RP25116 425 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 GNRHRP30968 328 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 TFPI2P48307 235 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 EMP1P54849 157 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 PIGPP57054 158 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 DEFB131AP59861 70 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 OR2B8PP59922 312 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 RPL37AP61513 92 aaKnown RBP2.21□□□□□ -2.06
TCOF1-208ENST00000506063 SRSF3P84103 164 aaKnown RBP2.21□□□□□ -2.06
TCOF1-208ENST00000506063 SPCS2Q15005 226 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 SURF2Q15527 256 aaPredicted RBP2.21□□□□□ -2.06
TCOF1-208ENST00000506063 PYDC2Q56P42 97 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 C10orf55Q5SWW7 151 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 LAMTOR1Q6IAA8 161 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 STEAP1BQ6NZ63 245 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 H2BFWTQ7Z2G1 175 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 TBC1D26Q86UD7 250 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 MFSD4AQ8N468 514 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 OR1L8Q8NGR8 309 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 OR52I2Q8NH67 350 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 OR4A16Q8NH70 328 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 TMEM167AQ8TBQ9 72 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 ZFAND1Q8TCF1 268 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 EEF1AKMT3Q96AZ1 226 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 RRNAD1Q96FB5 475 aaKnown RBP2.21□□□□□ -2.06
TCOF1-208ENST00000506063 C5orf30Q96GV9 206 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 CXorf58Q96LI9 332 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 TMEM56Q96MV1 263 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 FANCD2OSQ96PS1 177 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 CHAC1Q9BUX1 264 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 PLEKHA2Q9HB19 425 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 CCL28Q9NRJ3 127 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 FKBP11Q9NYL4 201 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 MTFP1Q9UDX5 166 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 CACFD1Q9UGQ2 172 aa2.21□□□□□ -2.06
TCOF1-208ENST00000506063 FCGBPQ9Y6R7 5405 aaPredicted RBP2.2□□□□□ -2.06
TCOF1-208ENST00000506063 TEX48A0A1B0GUV7 120 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 TMEM189A5PLL7 270 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 FABP12A6NFH5 140 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 MFSD2BA6NFX1 497 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 KNCNA6PVL3 124 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 SRRM4A7MD48 611 aaKnown RBP2.2□□□□□ -2.06
TCOF1-208ENST00000506063 CENPXA8MT69 81 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 CORTO00230 105 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 CHEK1O14757 476 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 CTDSPLO15194 276 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 KRASP01116 189 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 CD3DP04234 171 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 TRAPPC2P0DI81 140 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 TRAPPC2BP0DI82 140 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 PTBP1P26599 531 aaKnown RBP eCLIP2.2□□□□□ -2.06
TCOF1-208ENST00000506063 GPR183P32249 361 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 G6PCP35575 357 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 RFX2P48378 723 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 UCP3P55916 312 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 CMC4P56277 68 aaPredicted RBP2.2□□□□□ -2.06
TCOF1-208ENST00000506063 RND3P61587 244 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 RPL30P62888 115 aaKnown RBP2.2□□□□□ -2.06
TCOF1-208ENST00000506063 CD300CQ08708 224 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 POU2AF1Q16633 256 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 Q56UQ5 140 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 FAAP20Q6NZ36 180 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 FAM219AQ8IW50 185 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 STHQ8IWL8 128 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 VKORC1L1Q8N0U8 176 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 PUSL1Q8N0Z8 303 aaKnown RBP2.2□□□□□ -2.06
TCOF1-208ENST00000506063 TOMM5Q8N4H5 51 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 GBGT1Q8N5D6 347 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 TTC9CQ8N5M4 171 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 Q8N814 137 aa2.2□□□□□ -2.06
TCOF1-208ENST00000506063 GDPD1Q8N9F7 314 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms