RNA–Protein interactions for RNA: ENST00000505705.1

LIMCH1-206, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 3

Gene LIMCH1, Length 437 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-206ENST00000505705 FCGR2BP31994 310 aaPredicted RBP6.31□□□□□ -1.4
LIMCH1-206ENST00000505705 SLC38A11Q08AI6 406 aa6.31□□□□□ -1.4
LIMCH1-206ENST00000505705 FHL3Q13643 280 aa6.31□□□□□ -1.4
LIMCH1-206ENST00000505705 GAMTQ14353 236 aa6.31□□□□□ -1.4
LIMCH1-206ENST00000505705 PRR31Q5SQ13 230 aa6.31□□□□□ -1.4
LIMCH1-206ENST00000505705 ACOT7LQ6ZUV0 252 aa6.31□□□□□ -1.4
LIMCH1-206ENST00000505705 C1QL4Q86Z23 238 aa6.31□□□□□ -1.4
LIMCH1-206ENST00000505705 TMEM116Q8NCL8 245 aa6.31□□□□□ -1.4
LIMCH1-206ENST00000505705 OR1S2Q8NGQ3 325 aa6.31□□□□□ -1.4
LIMCH1-206ENST00000505705 OR2T35Q8NGX2 323 aa6.31□□□□□ -1.4
LIMCH1-206ENST00000505705 Q8WTZ3 238 aa6.31□□□□□ -1.4
LIMCH1-206ENST00000505705 CHAC2Q8WUX2 184 aa6.31□□□□□ -1.4
LIMCH1-206ENST00000505705 CHRDL1Q9BU40 450 aa6.31□□□□□ -1.4
LIMCH1-206ENST00000505705 MCRIP2Q9BUT9 160 aaKnown RBP6.31□□□□□ -1.4
LIMCH1-206ENST00000505705 C20orf24Q9BUV8 137 aa6.31□□□□□ -1.4
LIMCH1-206ENST00000505705 MRPL36Q9P0J6 103 aaKnown RBP6.31□□□□□ -1.4
LIMCH1-206ENST00000505705 FXYD6-FXYD2A0A087WZ82 144 aa6.3□□□□□ -1.4
LIMCH1-206ENST00000505705 IGSF23A1L1A6 192 aa6.3□□□□□ -1.4
LIMCH1-206ENST00000505705 PMS2P5A8MQ11 134 aa6.3□□□□□ -1.4
LIMCH1-206ENST00000505705 F8W735 103 aaPredicted RBP6.3□□□□□ -1.4
LIMCH1-206ENST00000505705 NDUFA4O00483 81 aa6.3□□□□□ -1.4
LIMCH1-206ENST00000505705 SAP30O75446 220 aa6.3□□□□□ -1.4
LIMCH1-206ENST00000505705 FABP1P07148 127 aa6.3□□□□□ -1.4
LIMCH1-206ENST00000505705 RPL12P30050 165 aaKnown RBP6.3□□□□□ -1.4
LIMCH1-206ENST00000505705 DLK1P80370 383 aa6.3□□□□□ -1.4
LIMCH1-206ENST00000505705 EWSR1Q01844 656 aaKnown RBP eCLIP6.3□□□□□ -1.4
LIMCH1-206ENST00000505705 NHLH2Q02577 135 aa6.3□□□□□ -1.4
LIMCH1-206ENST00000505705 BAXQ07812 192 aa6.3□□□□□ -1.4
LIMCH1-206ENST00000505705 KLF5Q13887 457 aaPredicted RBP6.3□□□□□ -1.4
LIMCH1-206ENST00000505705 ATP6V1FQ16864 119 aa6.3□□□□□ -1.4
LIMCH1-206ENST00000505705 TIGITQ495A1 244 aa6.3□□□□□ -1.4
LIMCH1-206ENST00000505705 ZNF600Q6ZNG1 722 aa6.3□□□□□ -1.4
LIMCH1-206ENST00000505705 GPHB5Q86YW7 130 aa6.3□□□□□ -1.4
LIMCH1-206ENST00000505705 LINC00482Q8N8I6 264 aa6.3□□□□□ -1.4
LIMCH1-206ENST00000505705 INO80EQ8NBZ0 244 aaPredicted RBP6.3□□□□□ -1.4
LIMCH1-206ENST00000505705 RNF126Q9BV68 326 aa6.3□□□□□ -1.4
LIMCH1-206ENST00000505705 GGACTQ9BVM4 153 aa6.3□□□□□ -1.4
LIMCH1-206ENST00000505705 C11orf1Q9H5F2 150 aa6.3□□□□□ -1.4
LIMCH1-206ENST00000505705 NPVFQ9HCQ7 196 aa6.3□□□□□ -1.4
LIMCH1-206ENST00000505705 UFC1Q9Y3C8 167 aa6.3□□□□□ -1.4
LIMCH1-206ENST00000505705 PUS1Q9Y606 427 aaKnown RBP eCLIP6.3□□□□□ -1.4
LIMCH1-206ENST00000505705 IGHV3OR16-8A0A075B7F1 116 aa6.29□□□□□ -1.4
LIMCH1-206ENST00000505705 TRAV14DV4A0A0A6YYC5 116 aa6.29□□□□□ -1.4
LIMCH1-206ENST00000505705 SEC14L6B5MCN3 397 aa6.29□□□□□ -1.4
LIMCH1-206ENST00000505705 PRSS46E5RG02 174 aa6.29□□□□□ -1.4
LIMCH1-206ENST00000505705 SMLR1H3BR10 107 aa6.29□□□□□ -1.4
LIMCH1-206ENST00000505705 IGLC1P0CG04 106 aa6.29□□□□□ -1.4
LIMCH1-206ENST00000505705 RD3LP0DJH9 198 aa6.29□□□□□ -1.4
LIMCH1-206ENST00000505705 IGLL1P15814 213 aa6.29□□□□□ -1.4
LIMCH1-206ENST00000505705 ADMP35318 185 aa6.29□□□□□ -1.4
LIMCH1-206ENST00000505705 AP2S1P53680 142 aaPredicted RBP6.29□□□□□ -1.4
LIMCH1-206ENST00000505705 ARL16Q0P5N6 197 aa6.29□□□□□ -1.4
LIMCH1-206ENST00000505705 RAB31Q13636 194 aa6.29□□□□□ -1.4
LIMCH1-206ENST00000505705 CLINT1Q14677 625 aa6.29□□□□□ -1.4
LIMCH1-206ENST00000505705 Q5BKY6 102 aa6.29□□□□□ -1.4
LIMCH1-206ENST00000505705 TEPPQ6URK8 271 aa6.29□□□□□ -1.4
LIMCH1-206ENST00000505705 TMEM144Q7Z5S9 345 aa6.29□□□□□ -1.4
LIMCH1-206ENST00000505705 ZNF546Q86UE3 836 aa6.29□□□□□ -1.4
LIMCH1-206ENST00000505705 OR9G4Q8NGQ1 327 aa6.29□□□□□ -1.4
LIMCH1-206ENST00000505705 OR5C1Q8NGR4 320 aa6.29□□□□□ -1.4
LIMCH1-206ENST00000505705 RCC1LQ96I51 464 aaKnown RBP6.29□□□□□ -1.4
LIMCH1-206ENST00000505705 UQCC1Q9NVA1 299 aa6.29□□□□□ -1.4
LIMCH1-206ENST00000505705 UBE2L5PA0A1B0GUS4 154 aa6.28□□□□□ -1.4
LIMCH1-206ENST00000505705 FNDC10F2Z333 226 aa6.28□□□□□ -1.4
LIMCH1-206ENST00000505705 LGALS9O00182 355 aa6.28□□□□□ -1.4
LIMCH1-206ENST00000505705 ZNF207O43670 478 aaKnown RBP6.28□□□□□ -1.4
LIMCH1-206ENST00000505705 IL4P05112 153 aa6.28□□□□□ -1.4
LIMCH1-206ENST00000505705 LYL1P12980 280 aa6.28□□□□□ -1.4
LIMCH1-206ENST00000505705 YPEL3P61236 119 aaPredicted RBP6.28□□□□□ -1.4
LIMCH1-206ENST00000505705 ZNF90Q03938 601 aa6.28□□□□□ -1.4
LIMCH1-206ENST00000505705 OR2F1Q13607 317 aa6.28□□□□□ -1.4
LIMCH1-206ENST00000505705 C9orf66Q5T8R8 295 aa6.28□□□□□ -1.4
LIMCH1-206ENST00000505705 TOMM20LQ6UXN7 152 aa6.28□□□□□ -1.4
LIMCH1-206ENST00000505705 UNQ9165/PRO28630Q6UXU0 137 aa6.28□□□□□ -1.4
LIMCH1-206ENST00000505705 REC114Q7Z4M0 266 aa6.28□□□□□ -1.4
LIMCH1-206ENST00000505705 AKAP14Q86UN6 197 aa6.28□□□□□ -1.4
LIMCH1-206ENST00000505705 HAPLN4Q86UW8 402 aa6.28□□□□□ -1.4
LIMCH1-206ENST00000505705 WFDC9Q8NEX5 89 aa6.28□□□□□ -1.4
LIMCH1-206ENST00000505705 DYNLRB2Q8TF09 96 aa6.28□□□□□ -1.4
LIMCH1-206ENST00000505705 NARS2Q96I59 477 aaKnown RBP6.28□□□□□ -1.4
LIMCH1-206ENST00000505705 TRGV9Q99603 122 aa6.28□□□□□ -1.4
LIMCH1-206ENST00000505705 GINS3Q9BRX5 216 aa6.28□□□□□ -1.4
LIMCH1-206ENST00000505705 PBDC1Q9BVG4 233 aa6.28□□□□□ -1.4
LIMCH1-206ENST00000505705 TMEM147Q9BVK8 224 aa6.28□□□□□ -1.4
LIMCH1-206ENST00000505705 GPR61Q9BZJ8 451 aa6.28□□□□□ -1.4
LIMCH1-206ENST00000505705 SMIM3Q9BZL3 60 aa6.28□□□□□ -1.4
LIMCH1-206ENST00000505705 HSPB11Q9Y547 144 aa6.28□□□□□ -1.4
LIMCH1-206ENST00000505705 COL6A5A8TX70 2615 aa6.27□□□□□ -1.41
LIMCH1-206ENST00000505705 A0A1B0GVG6 124 aa6.27□□□□□ -1.41
LIMCH1-206ENST00000505705 DFFBO76075 338 aa6.27□□□□□ -1.41
LIMCH1-206ENST00000505705 TOMM40O96008 361 aa6.27□□□□□ -1.41
LIMCH1-206ENST00000505705 IFNA5P01569 189 aa6.27□□□□□ -1.41
LIMCH1-206ENST00000505705 IGKV1-17P01599 117 aa6.27□□□□□ -1.41
LIMCH1-206ENST00000505705 PSG1P11464 419 aa6.27□□□□□ -1.41
LIMCH1-206ENST00000505705 FGF7P21781 194 aa6.27□□□□□ -1.41
LIMCH1-206ENST00000505705 NPPCP23582 126 aa6.27□□□□□ -1.41
LIMCH1-206ENST00000505705 BMI1P35226 326 aa6.27□□□□□ -1.41
LIMCH1-206ENST00000505705 LYZP61626 148 aa6.27□□□□□ -1.41
LIMCH1-206ENST00000505705 TM4SF20Q53R12 229 aa6.27□□□□□ -1.41
LIMCH1-206ENST00000505705 CYP2G1PQ6ZSU1 146 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms