RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 KCNIP3Q9Y2W7 256 aa14.6□□□□□ -0.07
UBE2D3-220ENST00000505307 TMEM56-RWDD3S4R434 201 aa14.6□□□□□ -0.07
UBE2D3-220ENST00000505307 HELTA6NFD8 242 aa14.59□□□□□ -0.07
UBE2D3-220ENST00000505307 CEBPZOSA8MTT3 80 aa14.59□□□□□ -0.07
UBE2D3-220ENST00000505307 SPP1P10451 314 aa14.59□□□□□ -0.07
UBE2D3-220ENST00000505307 AP2S1P53680 142 aaPredicted RBP14.59□□□□□ -0.07
UBE2D3-220ENST00000505307 YPEL3P61236 119 aaPredicted RBP14.59□□□□□ -0.07
UBE2D3-220ENST00000505307 TIGITQ495A1 244 aa14.59□□□□□ -0.07
UBE2D3-220ENST00000505307 TMEM268Q5VZI3 342 aa14.59□□□□□ -0.07
UBE2D3-220ENST00000505307 LGALS9CQ6DKI2 356 aa14.59□□□□□ -0.07
UBE2D3-220ENST00000505307 FAAP20Q6NZ36 180 aa14.59□□□□□ -0.07
UBE2D3-220ENST00000505307 FAM24BQ8N5W8 94 aa14.59□□□□□ -0.07
UBE2D3-220ENST00000505307 SLC24A4Q8NFF2 622 aa14.59□□□□□ -0.07
UBE2D3-220ENST00000505307 IL22RA2Q969J5 263 aa14.59□□□□□ -0.07
UBE2D3-220ENST00000505307 GPR146Q96CH1 333 aa14.59□□□□□ -0.07
UBE2D3-220ENST00000505307 DIRAS2Q96HU8 199 aa14.59□□□□□ -0.07
UBE2D3-220ENST00000505307 SCGB3A2Q96PL1 93 aa14.59□□□□□ -0.07
UBE2D3-220ENST00000505307 U3KQE9 123 aa14.59□□□□□ -0.07
UBE2D3-220ENST00000505307 IGLC1P0CG04 106 aa14.58□□□□□ -0.08
UBE2D3-220ENST00000505307 TCTAP57738 103 aa14.58□□□□□ -0.08
UBE2D3-220ENST00000505307 IL18Q14116 193 aa14.58□□□□□ -0.08
UBE2D3-220ENST00000505307 PRSS54Q6PEW0 395 aa14.58□□□□□ -0.08
UBE2D3-220ENST00000505307 TRPT1Q86TN4 253 aaKnown RBP14.58□□□□□ -0.08
UBE2D3-220ENST00000505307 OR4C16Q8NGL9 310 aa14.58□□□□□ -0.08
UBE2D3-220ENST00000505307 BCL7BQ9BQE9 202 aa14.58□□□□□ -0.08
UBE2D3-220ENST00000505307 HNRNPCP07910 306 aaKnown RBP eCLIP14.57□□□□□ -0.084e-11■■□□□ 14.1
UBE2D3-220ENST00000505307 OR10J1P30954 320 aa14.57□□□□□ -0.08
UBE2D3-220ENST00000505307 RND2P52198 227 aa14.57□□□□□ -0.08
UBE2D3-220ENST00000505307 NANOS2P60321 138 aaKnown RBP14.57□□□□□ -0.08
UBE2D3-220ENST00000505307 SPCS2Q15005 226 aa14.57□□□□□ -0.08
UBE2D3-220ENST00000505307 DCANP1Q8TF63 244 aa14.57□□□□□ -0.08
UBE2D3-220ENST00000505307 RAB2BQ8WUD1 216 aa14.57□□□□□ -0.08
UBE2D3-220ENST00000505307 CCDC59Q9P031 241 aaKnown RBP14.57□□□□□ -0.08
UBE2D3-220ENST00000505307 FBXL17Q9UF56 701 aa14.57□□□□□ -0.08
UBE2D3-220ENST00000505307 SCP2D1Q9UJQ7 156 aa14.57□□□□□ -0.08
UBE2D3-220ENST00000505307 SULT1A3P0DMM9 295 aa14.56□□□□□ -0.08
UBE2D3-220ENST00000505307 SULT1A4P0DMN0 295 aa14.56□□□□□ -0.08
UBE2D3-220ENST00000505307 CLVS1Q8IUQ0 354 aaPredicted RBP14.56□□□□□ -0.08
UBE2D3-220ENST00000505307 OR51S1Q8NGJ8 323 aa14.56□□□□□ -0.08
UBE2D3-220ENST00000505307 HRH4Q9H3N8 390 aa14.56□□□□□ -0.08
UBE2D3-220ENST00000505307 RSL24D1Q9UHA3 163 aaKnown RBP14.56□□□□□ -0.08
UBE2D3-220ENST00000505307 PIGBOS1A0A0B4J2F0 54 aa14.55□□□□□ -0.08
UBE2D3-220ENST00000505307 ANKRD20A5PA0PJZ0 165 aa14.55□□□□□ -0.08
UBE2D3-220ENST00000505307 GSTZ1O43708 216 aaPredicted RBP14.55□□□□□ -0.08
UBE2D3-220ENST00000505307 ZNF688P0C7X2 276 aa14.55□□□□□ -0.08
UBE2D3-220ENST00000505307 NPY1RP25929 384 aa14.55□□□□□ -0.08
UBE2D3-220ENST00000505307 NMSQ5H8A3 153 aa14.55□□□□□ -0.08
UBE2D3-220ENST00000505307 C16orf54Q6UWD8 224 aa14.55□□□□□ -0.08
UBE2D3-220ENST00000505307 C2CD4CQ8TF44 421 aa14.55□□□□□ -0.08
UBE2D3-220ENST00000505307 SEPSECSQ9HD40 501 aaKnown RBP14.55□□□□□ -0.08
UBE2D3-220ENST00000505307 U3KQ87 197 aa14.55□□□□□ -0.08
UBE2D3-220ENST00000505307 C11orf94C9JXX5 98 aa14.54□□□□□ -0.08
UBE2D3-220ENST00000505307 MIFP14174 115 aa14.54□□□□□ -0.08
UBE2D3-220ENST00000505307 CCR6P51684 374 aa14.54□□□□□ -0.08
UBE2D3-220ENST00000505307 TMBIM6P55061 237 aa14.54□□□□□ -0.08
UBE2D3-220ENST00000505307 ATP5IP56385 69 aaPredicted RBP14.54□□□□□ -0.08
UBE2D3-220ENST00000505307 DHRS2Q13268 280 aa14.54□□□□□ -0.08
UBE2D3-220ENST00000505307 DYNC2LI1Q8TCX1 351 aa14.54□□□□□ -0.08
UBE2D3-220ENST00000505307 GLMPQ8WWB7 406 aa14.54□□□□□ -0.08
UBE2D3-220ENST00000505307 A0A0B4J2A0 478 aa14.53□□□□□ -0.08
UBE2D3-220ENST00000505307 GIG44P09565 113 aaPredicted RBP14.53□□□□□ -0.08
UBE2D3-220ENST00000505307 RD3LP0DJH9 198 aa14.53□□□□□ -0.08
UBE2D3-220ENST00000505307 SRPXP78539 464 aa14.53□□□□□ -0.08
UBE2D3-220ENST00000505307 Q8NAQ8 132 aa14.53□□□□□ -0.08
UBE2D3-220ENST00000505307 NPIPB3Q92617 1050 aa14.53□□□□□ -0.08
UBE2D3-220ENST00000505307 SHPKQ9UHJ6 478 aa14.53□□□□□ -0.08
UBE2D3-220ENST00000505307 KNCNA6PVL3 124 aa14.52□□□□□ -0.09
UBE2D3-220ENST00000505307 ZNF705EA8MWA4 302 aaPredicted RBP14.52□□□□□ -0.09
UBE2D3-220ENST00000505307 DEFB4AO15263 64 aa14.52□□□□□ -0.09
UBE2D3-220ENST00000505307 TOMM40O96008 361 aa14.52□□□□□ -0.09
UBE2D3-220ENST00000505307 IFNA10P01566 189 aa14.52□□□□□ -0.09
UBE2D3-220ENST00000505307 IL4P05112 153 aa14.52□□□□□ -0.09
UBE2D3-220ENST00000505307 ANXA3P12429 323 aa14.52□□□□□ -0.09
UBE2D3-220ENST00000505307 NUP62P37198 522 aaPredicted RBP14.52□□□□□ -0.09
UBE2D3-220ENST00000505307 SNRPD3P62318 126 aaKnown RBP14.52□□□□□ -0.09
UBE2D3-220ENST00000505307 ACTL10Q5JWF8 245 aa14.52□□□□□ -0.09
UBE2D3-220ENST00000505307 CENPSQ8N2Z9 138 aa14.52□□□□□ -0.09
UBE2D3-220ENST00000505307 TMEM170AQ8WVE7 144 aa14.52□□□□□ -0.09
UBE2D3-220ENST00000505307 HSPB7Q9UBY9 170 aa14.52□□□□□ -0.09
UBE2D3-220ENST00000505307 PFDN2Q9UHV9 154 aa14.52□□□□□ -0.09
UBE2D3-220ENST00000505307 NUTF2P61970 127 aaKnown RBP14.51□□□□□ -0.09
UBE2D3-220ENST00000505307 SMCO1Q147U7 214 aa14.51□□□□□ -0.09
UBE2D3-220ENST00000505307 ACY3Q96HD9 319 aa14.51□□□□□ -0.09
UBE2D3-220ENST00000505307 RAB40CQ96S21 281 aa14.51□□□□□ -0.09
UBE2D3-220ENST00000505307 NRN1Q9NPD7 142 aa14.51□□□□□ -0.09
UBE2D3-220ENST00000505307 BUB3O43684 328 aa14.5□□□□□ -0.09
UBE2D3-220ENST00000505307 USF2Q15853 346 aaPredicted RBP14.5□□□□□ -0.09
UBE2D3-220ENST00000505307 PSMG4Q5JS54 123 aa14.5□□□□□ -0.09
UBE2D3-220ENST00000505307 LGI3Q8N145 548 aa14.5□□□□□ -0.09
UBE2D3-220ENST00000505307 RPP25LQ8N5L8 163 aaKnown RBP14.5□□□□□ -0.09
UBE2D3-220ENST00000505307 DTD1Q8TEA8 209 aa14.5□□□□□ -0.09
UBE2D3-220ENST00000505307 C1QTNF4Q9BXJ3 329 aa14.5□□□□□ -0.09
UBE2D3-220ENST00000505307 MCUBQ9NWR8 336 aa14.5□□□□□ -0.09
UBE2D3-220ENST00000505307 IGHV4-28A0A0C4DH34 117 aa14.49□□□□□ -0.09
UBE2D3-220ENST00000505307 NOL3O60936 208 aaKnown RBP14.49□□□□□ -0.09
UBE2D3-220ENST00000505307 NXPH3O95157 252 aa14.49□□□□□ -0.09
UBE2D3-220ENST00000505307 C4BPBP20851 252 aa14.49□□□□□ -0.09
UBE2D3-220ENST00000505307 KLF9Q13886 244 aaPredicted RBP14.49□□□□□ -0.09
UBE2D3-220ENST00000505307 SIGLEC15Q6ZMC9 328 aa14.49□□□□□ -0.09
UBE2D3-220ENST00000505307 OR51G1Q8NGK1 321 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms