RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 PDCD10Q9BUL8 212 aa9.58□□□□□ -0.88
DDX41-204ENST00000504807 C6orf62Q9GZU0 229 aaPredicted RBP9.58□□□□□ -0.88
DDX41-204ENST00000504807 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.58□□□□□ -0.88
DDX41-204ENST00000504807 C14orf166Q9Y224 244 aaKnown RBP9.58□□□□□ -0.88
DDX41-204ENST00000504807 U3KQE9 123 aa9.58□□□□□ -0.88
DDX41-204ENST00000504807 KNCNA6PVL3 124 aa9.57□□□□□ -0.88
DDX41-204ENST00000504807 C4BPBP20851 252 aa9.57□□□□□ -0.88
DDX41-204ENST00000504807 P2RY1P47900 373 aa9.57□□□□□ -0.88
DDX41-204ENST00000504807 NANOS2P60321 138 aaKnown RBP9.57□□□□□ -0.88
DDX41-204ENST00000504807 C2orf83Q53S99 150 aa9.57□□□□□ -0.88
DDX41-204ENST00000504807 NMSQ5H8A3 153 aa9.57□□□□□ -0.88
DDX41-204ENST00000504807 LYZL2Q7Z4W2 148 aa9.57□□□□□ -0.88
DDX41-204ENST00000504807 FAM219AQ8IW50 185 aa9.57□□□□□ -0.88
DDX41-204ENST00000504807 DCANP1Q8TF63 244 aa9.57□□□□□ -0.88
DDX41-204ENST00000504807 V9GYH0 126 aa9.57□□□□□ -0.88
DDX41-204ENST00000504807 MPTX1A8MV57 137 aa9.56□□□□□ -0.88
DDX41-204ENST00000504807 CORTO00230 105 aa9.56□□□□□ -0.88
DDX41-204ENST00000504807 B3GALNT1O75752 331 aa9.56□□□□□ -0.88
DDX41-204ENST00000504807 ATG12O94817 140 aa9.56□□□□□ -0.88
DDX41-204ENST00000504807 CA1P00915 261 aaPredicted RBP9.56□□□□□ -0.88
DDX41-204ENST00000504807 HTR2BP41595 481 aa9.56□□□□□ -0.88
DDX41-204ENST00000504807 SUB1P53999 127 aaKnown RBP eCLIP9.56□□□□□ -0.88
DDX41-204ENST00000504807 DHODHQ02127 395 aa9.56□□□□□ -0.88
DDX41-204ENST00000504807 KLF9Q13886 244 aaPredicted RBP9.56□□□□□ -0.88
DDX41-204ENST00000504807 TRPT1Q86TN4 253 aaKnown RBP9.56□□□□□ -0.88
DDX41-204ENST00000504807 SLC24A4Q8NFF2 622 aa9.56□□□□□ -0.88
DDX41-204ENST00000504807 GLMPQ8WWB7 406 aa9.56□□□□□ -0.88
DDX41-204ENST00000504807 ENY2Q9NPA8 101 aa9.56□□□□□ -0.88
DDX41-204ENST00000504807 HEYLQ9NQ87 328 aaPredicted RBP9.56□□□□□ -0.88
DDX41-204ENST00000504807 RABAC1Q9UI14 185 aa9.56□□□□□ -0.88
DDX41-204ENST00000504807 HSPG2P98160 4391 aa9.56□□□□□ -0.88
DDX41-204ENST00000504807 CEBPZOSA8MTT3 80 aa9.55□□□□□ -0.88
DDX41-204ENST00000504807 ZNF688P0C7X2 276 aa9.55□□□□□ -0.88
DDX41-204ENST00000504807 NPPCP23582 126 aa9.55□□□□□ -0.88
DDX41-204ENST00000504807 RPL11P62913 178 aaKnown RBP9.55□□□□□ -0.88
DDX41-204ENST00000504807 ZNF79Q15937 498 aa9.55□□□□□ -0.88
DDX41-204ENST00000504807 STXBP6Q8NFX7 210 aa9.55□□□□□ -0.88
DDX41-204ENST00000504807 OR11H2Q8NH07 326 aa9.55□□□□□ -0.88
DDX41-204ENST00000504807 NPIPB3Q92617 1050 aa9.55□□□□□ -0.88
DDX41-204ENST00000504807 PRRT1Q99946 306 aa9.55□□□□□ -0.88
DDX41-204ENST00000504807 RARRES2Q99969 163 aa9.55□□□□□ -0.88
DDX41-204ENST00000504807 RBKSQ9H477 322 aa9.55□□□□□ -0.88
DDX41-204ENST00000504807 IGKV1D-37A0A075B6S9 117 aa9.54□□□□□ -0.88
DDX41-204ENST00000504807 TRAV2A0A0B4J234 112 aa9.54□□□□□ -0.88
DDX41-204ENST00000504807 DNASE2O00115 360 aaPredicted RBP9.54□□□□□ -0.88
DDX41-204ENST00000504807 RBMY1A1P0DJD3 496 aaKnown RBP9.54□□□□□ -0.88
DDX41-204ENST00000504807 RBMY1CP0DJD4 496 aa9.54□□□□□ -0.88
DDX41-204ENST00000504807 AKR1C4P17516 323 aa9.54□□□□□ -0.88
DDX41-204ENST00000504807 ATF4P18848 351 aaPredicted RBP9.54□□□□□ -0.88
DDX41-204ENST00000504807 NPY1RP25929 384 aa9.54□□□□□ -0.88
DDX41-204ENST00000504807 OR10J1P30954 320 aa9.54□□□□□ -0.88
DDX41-204ENST00000504807 DEFB1P60022 68 aa9.54□□□□□ -0.88
DDX41-204ENST00000504807 RBMY1FQ15415 496 aaKnown RBP9.54□□□□□ -0.88
DDX41-204ENST00000504807 LGALS9CQ6DKI2 356 aa9.54□□□□□ -0.88
DDX41-204ENST00000504807 C16orf54Q6UWD8 224 aa9.54□□□□□ -0.88
DDX41-204ENST00000504807 Q8NAQ8 132 aa9.54□□□□□ -0.88
DDX41-204ENST00000504807 PHLDA1Q8WV24 401 aaPredicted RBP9.54□□□□□ -0.88
DDX41-204ENST00000504807 METTL26Q96S19 204 aa9.54□□□□□ -0.88
DDX41-204ENST00000504807 BCL7BQ9BQE9 202 aa9.54□□□□□ -0.88
DDX41-204ENST00000504807 HSPB7Q9UBY9 170 aa9.54□□□□□ -0.88
DDX41-204ENST00000504807 AGRNO00468 2067 aa9.54□□□□□ -0.88
DDX41-204ENST00000504807 DNAH17Q9UFH2 4485 aa9.53□□□□□ -0.88
DDX41-204ENST00000504807 FABP12A6NFH5 140 aa9.53□□□□□ -0.88
DDX41-204ENST00000504807 SULT1A3P0DMM9 295 aa9.53□□□□□ -0.88
DDX41-204ENST00000504807 SULT1A4P0DMN0 295 aa9.53□□□□□ -0.88
DDX41-204ENST00000504807 YPEL3P61236 119 aaPredicted RBP9.53□□□□□ -0.88
DDX41-204ENST00000504807 OR1S2Q8NGQ3 325 aa9.53□□□□□ -0.88
DDX41-204ENST00000504807 MCFD2Q8NI22 146 aa9.53□□□□□ -0.88
DDX41-204ENST00000504807 RNASEH2CQ8TDP1 164 aaKnown RBP9.53□□□□□ -0.88
DDX41-204ENST00000504807 IL22RA2Q969J5 263 aa9.53□□□□□ -0.88
DDX41-204ENST00000504807 ACY3Q96HD9 319 aa9.53□□□□□ -0.88
DDX41-204ENST00000504807 RBM38Q9H0Z9 239 aaKnown RBP9.53□□□□□ -0.88
DDX41-204ENST00000504807 C11orf68Q9H3H3 251 aaKnown RBP9.53□□□□□ -0.88
DDX41-204ENST00000504807 MCUBQ9NWR8 336 aa9.53□□□□□ -0.88
DDX41-204ENST00000504807 CLEC5AQ9NY25 188 aa9.53□□□□□ -0.88
DDX41-204ENST00000504807 KLK5Q9Y337 293 aaPredicted RBP9.53□□□□□ -0.88
DDX41-204ENST00000504807 X6R8D5 127 aa9.53□□□□□ -0.88
DDX41-204ENST00000504807 DNAH6Q9C0G6 4158 aa9.53□□□□□ -0.88
DDX41-204ENST00000504807 A0A1B0GVY2 172 aa9.52□□□□□ -0.89
DDX41-204ENST00000504807 PITX3O75364 302 aa9.52□□□□□ -0.89
DDX41-204ENST00000504807 IL4P05112 153 aa9.52□□□□□ -0.89
DDX41-204ENST00000504807 CMC4P56277 68 aaPredicted RBP9.52□□□□□ -0.89
DDX41-204ENST00000504807 PAFAH1B2P68402 229 aa9.52□□□□□ -0.89
DDX41-204ENST00000504807 PRR20EP86478 221 aa9.52□□□□□ -0.89
DDX41-204ENST00000504807 PRR20CP86479 221 aa9.52□□□□□ -0.89
DDX41-204ENST00000504807 PRR20DP86480 221 aa9.52□□□□□ -0.89
DDX41-204ENST00000504807 PRR20BP86481 221 aa9.52□□□□□ -0.89
DDX41-204ENST00000504807 PRR20AP86496 221 aa9.52□□□□□ -0.89
DDX41-204ENST00000504807 ZNF90Q03938 601 aa9.52□□□□□ -0.89
DDX41-204ENST00000504807 SMCO1Q147U7 214 aa9.52□□□□□ -0.89
DDX41-204ENST00000504807 CSNK1G2-AS1Q8NCQ2 148 aa9.52□□□□□ -0.89
DDX41-204ENST00000504807 RSL24D1Q9UHA3 163 aaKnown RBP9.52□□□□□ -0.89
DDX41-204ENST00000504807 A0A0B4J2A0 478 aa9.51□□□□□ -0.89
DDX41-204ENST00000504807 RPS10-NUDT3A0A1W2PQS6 291 aa9.51□□□□□ -0.89
DDX41-204ENST00000504807 BUB3O43684 328 aa9.51□□□□□ -0.89
DDX41-204ENST00000504807 TOMM40O96008 361 aa9.51□□□□□ -0.89
DDX41-204ENST00000504807 HNRNPCP07910 306 aaKnown RBP eCLIP9.51□□□□□ -0.89
DDX41-204ENST00000504807 PSG1P11464 419 aa9.51□□□□□ -0.89
DDX41-204ENST00000504807 SLC25A4P12235 298 aa9.51□□□□□ -0.89
DDX41-204ENST00000504807 ACTL10Q5JWF8 245 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms