RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 SOSTQ9BQB4 213 aa9.33□□□□□ -0.92
RNF4-206ENST00000504782 SLIRPQ9GZT3 109 aaKnown RBP9.33□□□□□ -0.92
RNF4-206ENST00000504782 CCDC59Q9P031 241 aaKnown RBP9.33□□□□□ -0.92
RNF4-206ENST00000504782 U3KQE9 123 aa9.33□□□□□ -0.92
RNF4-206ENST00000504782 TRAV2A0A0B4J234 112 aa9.32□□□□□ -0.92
RNF4-206ENST00000504782 GSTZ1O43708 216 aaPredicted RBP9.32□□□□□ -0.92
RNF4-206ENST00000504782 CD5P06127 495 aa9.32□□□□□ -0.92
RNF4-206ENST00000504782 ZNF688P0C7X2 276 aa9.32□□□□□ -0.92
RNF4-206ENST00000504782 TNFSF8P32971 234 aa9.32□□□□□ -0.92
RNF4-206ENST00000504782 USF2Q15853 346 aaPredicted RBP9.32□□□□□ -0.92
RNF4-206ENST00000504782 GSG1LQ6UXU4 331 aa9.32□□□□□ -0.92
RNF4-206ENST00000504782 LYZL2Q7Z4W2 148 aa9.32□□□□□ -0.92
RNF4-206ENST00000504782 RPP25LQ8N5L8 163 aaKnown RBP9.32□□□□□ -0.92
RNF4-206ENST00000504782 SLC24A4Q8NFF2 622 aa9.32□□□□□ -0.92
RNF4-206ENST00000504782 RAB2BQ8WUD1 216 aa9.32□□□□□ -0.92
RNF4-206ENST00000504782 NPIPB3Q92617 1050 aa9.32□□□□□ -0.92
RNF4-206ENST00000504782 FRAS1Q86XX4 4008 aa9.32□□□□□ -0.92
RNF4-206ENST00000504782 A0A1W2PS18 150 aa9.31□□□□□ -0.92
RNF4-206ENST00000504782 H3BMQ9 156 aa9.31□□□□□ -0.92
RNF4-206ENST00000504782 AKR1C4P17516 323 aa9.31□□□□□ -0.92
RNF4-206ENST00000504782 C4BPBP20851 252 aa9.31□□□□□ -0.92
RNF4-206ENST00000504782 OR10J1P30954 320 aa9.31□□□□□ -0.92
RNF4-206ENST00000504782 TMBIM6P55061 237 aa9.31□□□□□ -0.92
RNF4-206ENST00000504782 NMSQ5H8A3 153 aa9.31□□□□□ -0.92
RNF4-206ENST00000504782 TRPT1Q86TN4 253 aaKnown RBP9.31□□□□□ -0.92
RNF4-206ENST00000504782 PRRT1Q99946 306 aa9.31□□□□□ -0.92
RNF4-206ENST00000504782 KRTAP17-1Q9BYP8 105 aa9.31□□□□□ -0.92
RNF4-206ENST00000504782 TMEM231Q9H6L2 316 aa9.31□□□□□ -0.92
RNF4-206ENST00000504782 FBXL17Q9UF56 701 aa9.31□□□□□ -0.92
RNF4-206ENST00000504782 TRAV30A0A087WSZ9 112 aa9.3□□□□□ -0.92
RNF4-206ENST00000504782 RPS10-NUDT3A0A1W2PQS6 291 aa9.3□□□□□ -0.92
RNF4-206ENST00000504782 DEDDO75618 318 aa9.3□□□□□ -0.92
RNF4-206ENST00000504782 SULT1A3P0DMM9 295 aa9.3□□□□□ -0.92
RNF4-206ENST00000504782 SULT1A4P0DMN0 295 aa9.3□□□□□ -0.92
RNF4-206ENST00000504782 NPY1RP25929 384 aa9.3□□□□□ -0.92
RNF4-206ENST00000504782 YPEL3P61236 119 aaPredicted RBP9.3□□□□□ -0.92
RNF4-206ENST00000504782 C16orf54Q6UWD8 224 aa9.3□□□□□ -0.92
RNF4-206ENST00000504782 STHQ8IWL8 128 aa9.3□□□□□ -0.92
RNF4-206ENST00000504782 TMEM217Q8N7C4 229 aa9.3□□□□□ -0.92
RNF4-206ENST00000504782 OR1S2Q8NGQ3 325 aa9.3□□□□□ -0.92
RNF4-206ENST00000504782 C11orf45Q8TAV5 145 aa9.3□□□□□ -0.92
RNF4-206ENST00000504782 RNASEH2CQ8TDP1 164 aaKnown RBP9.3□□□□□ -0.92
RNF4-206ENST00000504782 GLMPQ8WWB7 406 aa9.3□□□□□ -0.92
RNF4-206ENST00000504782 ACY3Q96HD9 319 aa9.3□□□□□ -0.92
RNF4-206ENST00000504782 C11orf68Q9H3H3 251 aaKnown RBP9.3□□□□□ -0.92
RNF4-206ENST00000504782 RBKSQ9H477 322 aa9.3□□□□□ -0.92
RNF4-206ENST00000504782 MCUBQ9NWR8 336 aa9.3□□□□□ -0.92
RNF4-206ENST00000504782 CLEC5AQ9NY25 188 aa9.3□□□□□ -0.92
RNF4-206ENST00000504782 KLK5Q9Y337 293 aaPredicted RBP9.3□□□□□ -0.92
RNF4-206ENST00000504782 FABP12A6NFH5 140 aa9.29□□□□□ -0.92
RNF4-206ENST00000504782 IL4P05112 153 aa9.29□□□□□ -0.92
RNF4-206ENST00000504782 HNRNPCP07910 306 aaKnown RBP eCLIP9.29□□□□□ -0.92
RNF4-206ENST00000504782 RBMY1A1P0DJD3 496 aaKnown RBP9.29□□□□□ -0.92
RNF4-206ENST00000504782 RBMY1CP0DJD4 496 aa9.29□□□□□ -0.92
RNF4-206ENST00000504782 SLC25A4P12235 298 aa9.29□□□□□ -0.92
RNF4-206ENST00000504782 DHRS2Q13268 280 aa9.29□□□□□ -0.92
RNF4-206ENST00000504782 RBMY1FQ15415 496 aaKnown RBP9.29□□□□□ -0.92
RNF4-206ENST00000504782 ACTL10Q5JWF8 245 aa9.29□□□□□ -0.92
RNF4-206ENST00000504782 Q8NAQ8 132 aa9.29□□□□□ -0.92
RNF4-206ENST00000504782 Q8WTZ3 238 aa9.29□□□□□ -0.92
RNF4-206ENST00000504782 GRAMD2BQ96HH9 432 aa9.29□□□□□ -0.92
RNF4-206ENST00000504782 HSPB7Q9UBY9 170 aa9.29□□□□□ -0.92
RNF4-206ENST00000504782 VPS13DQ5THJ4 4388 aa9.28□□□□□ -0.92
RNF4-206ENST00000504782 IFNA10P01566 189 aa9.28□□□□□ -0.92
RNF4-206ENST00000504782 PSG1P11464 419 aa9.28□□□□□ -0.92
RNF4-206ENST00000504782 KLF9Q13886 244 aaPredicted RBP9.28□□□□□ -0.92
RNF4-206ENST00000504782 SMCO1Q147U7 214 aa9.28□□□□□ -0.92
RNF4-206ENST00000504782 PSMG4Q5JS54 123 aa9.28□□□□□ -0.92
RNF4-206ENST00000504782 MCFD2Q8NI22 146 aa9.28□□□□□ -0.92
RNF4-206ENST00000504782 DTD1Q8TEA8 209 aa9.28□□□□□ -0.92
RNF4-206ENST00000504782 IL22RA2Q969J5 263 aa9.28□□□□□ -0.92
RNF4-206ENST00000504782 RAB40CQ96S21 281 aa9.28□□□□□ -0.92
RNF4-206ENST00000504782 BCL7BQ9BQE9 202 aa9.28□□□□□ -0.92
RNF4-206ENST00000504782 RSL24D1Q9UHA3 163 aaKnown RBP9.28□□□□□ -0.92
RNF4-206ENST00000504782 SCP2D1Q9UJQ7 156 aa9.28□□□□□ -0.92
RNF4-206ENST00000504782 KCNIP3Q9Y2W7 256 aa9.28□□□□□ -0.92
RNF4-206ENST00000504782 X6R8D5 127 aa9.28□□□□□ -0.92
RNF4-206ENST00000504782 DNAH10Q8IVF4 4471 aa9.27□□□□□ -0.93
RNF4-206ENST00000504782 IGKV1D-37A0A075B6S9 117 aa9.27□□□□□ -0.93
RNF4-206ENST00000504782 A0A0B4J2A0 478 aa9.27□□□□□ -0.93
RNF4-206ENST00000504782 IGHV4-28A0A0C4DH34 117 aa9.27□□□□□ -0.93
RNF4-206ENST00000504782 BUB3O43684 328 aa9.27□□□□□ -0.93
RNF4-206ENST00000504782 TOMM40O96008 361 aa9.27□□□□□ -0.93
RNF4-206ENST00000504782 RD3LP0DJH9 198 aa9.27□□□□□ -0.93
RNF4-206ENST00000504782 CCR6P51684 374 aa9.27□□□□□ -0.93
RNF4-206ENST00000504782 DEFB1P60022 68 aa9.27□□□□□ -0.93
RNF4-206ENST00000504782 PRR20EP86478 221 aa9.27□□□□□ -0.93
RNF4-206ENST00000504782 PRR20CP86479 221 aa9.27□□□□□ -0.93
RNF4-206ENST00000504782 PRR20DP86480 221 aa9.27□□□□□ -0.93
RNF4-206ENST00000504782 PRR20BP86481 221 aa9.27□□□□□ -0.93
RNF4-206ENST00000504782 PRR20AP86496 221 aa9.27□□□□□ -0.93
RNF4-206ENST00000504782 ZNF90Q03938 601 aa9.27□□□□□ -0.93
RNF4-206ENST00000504782 CSNK1G2-AS1Q8NCQ2 148 aa9.27□□□□□ -0.93
RNF4-206ENST00000504782 OR51G1Q8NGK1 321 aa9.27□□□□□ -0.93
RNF4-206ENST00000504782 TRIM63Q969Q1 353 aa9.27□□□□□ -0.93
RNF4-206ENST00000504782 NARS2Q96I59 477 aaKnown RBP9.27□□□□□ -0.93
RNF4-206ENST00000504782 RABL2AQ9UBK7 228 aaPredicted RBP9.27□□□□□ -0.93
RNF4-206ENST00000504782 SHPKQ9UHJ6 478 aa9.27□□□□□ -0.93
RNF4-206ENST00000504782 RABL2BQ9UNT1 228 aa9.27□□□□□ -0.93
RNF4-206ENST00000504782 ELOA3CA0A087WX78 387 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms