RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 RPS10-NUDT3A0A1W2PQS6 291 aa18.96■□□□□ 0.63
PVT1-201ENST00000504719 MED6O75586 246 aa18.96■□□□□ 0.63
PVT1-201ENST00000504719 CASC10Q5T4H9 136 aa18.96■□□□□ 0.63
PVT1-201ENST00000504719 C15orf62A8K5M9 175 aa18.95■□□□□ 0.62
PVT1-201ENST00000504719 TMEM50AO95807 157 aa18.95■□□□□ 0.62
PVT1-201ENST00000504719 OR4X1Q8NH49 305 aa18.95■□□□□ 0.62
PVT1-201ENST00000504719 ZNF431Q8TF32 576 aaPredicted RBP18.95■□□□□ 0.62
PVT1-201ENST00000504719 ZNF207O43670 478 aaKnown RBP18.94■□□□□ 0.62
PVT1-201ENST00000504719 SYNGR2O43760 224 aa18.94■□□□□ 0.62
PVT1-201ENST00000504719 CLN5O75503 358 aa18.94■□□□□ 0.62
PVT1-201ENST00000504719 YIF1AO95070 293 aa18.94■□□□□ 0.62
PVT1-201ENST00000504719 RETNQ9HD89 108 aa18.94■□□□□ 0.62
PVT1-201ENST00000504719 NBEAL2Q6ZNJ1 2754 aa18.94■□□□□ 0.62
PVT1-201ENST00000504719 TSPAN4O14817 238 aa18.93■□□□□ 0.62
PVT1-201ENST00000504719 IFNA4P05014 189 aa18.93■□□□□ 0.62
PVT1-201ENST00000504719 ATP5IP56385 69 aaPredicted RBP18.93■□□□□ 0.62
PVT1-201ENST00000504719 NRARPQ7Z6K4 114 aa18.93■□□□□ 0.62
PVT1-201ENST00000504719 OR10C1Q96KK4 312 aa18.93■□□□□ 0.62
PVT1-201ENST00000504719 SPAG8Q99932 426 aaPredicted RBP18.93■□□□□ 0.62
PVT1-201ENST00000504719 WRBO00258 174 aa18.92■□□□□ 0.62
PVT1-201ENST00000504719 SLC25A4P12235 298 aa18.92■□□□□ 0.62
PVT1-201ENST00000504719 LYL1P12980 280 aa18.92■□□□□ 0.62
PVT1-201ENST00000504719 IAH1Q2TAA2 248 aaPredicted RBP18.92■□□□□ 0.62
PVT1-201ENST00000504719 LAMTOR1Q6IAA8 161 aa18.92■□□□□ 0.62
PVT1-201ENST00000504719 ETFRF1Q6IPR1 90 aa18.92■□□□□ 0.62
PVT1-201ENST00000504719 PRSS54Q6PEW0 395 aa18.92■□□□□ 0.62
PVT1-201ENST00000504719 OR4D5Q8NGN0 318 aa18.92■□□□□ 0.62
PVT1-201ENST00000504719 CIB3Q96Q77 187 aaPredicted RBP18.92■□□□□ 0.62
PVT1-201ENST00000504719 NKX2-1P43699 371 aaPredicted RBP18.91■□□□□ 0.62
PVT1-201ENST00000504719 RND2P52198 227 aa18.91■□□□□ 0.62
PVT1-201ENST00000504719 DEFA1P59665 94 aa18.91■□□□□ 0.62
PVT1-201ENST00000504719 DEFA3P59666 94 aa18.91■□□□□ 0.62
PVT1-201ENST00000504719 ID3Q02535 119 aa18.91■□□□□ 0.62
PVT1-201ENST00000504719 SMPXQ9UHP9 88 aa18.91■□□□□ 0.62
PVT1-201ENST00000504719 RYR3Q15413 4870 aa18.91■□□□□ 0.62
PVT1-201ENST00000504719 CCSO14618 274 aa18.9■□□□□ 0.62
PVT1-201ENST00000504719 SCGB2A1O75556 95 aa18.9■□□□□ 0.62
PVT1-201ENST00000504719 POLR2GP62487 172 aaKnown RBP eCLIP18.9■□□□□ 0.62
PVT1-201ENST00000504719 ZNF600Q6ZNG1 722 aa18.9■□□□□ 0.62
PVT1-201ENST00000504719 C12orf45Q8N5I9 185 aaPredicted RBP18.9■□□□□ 0.62
PVT1-201ENST00000504719 TMEM116Q8NCL8 245 aa18.9■□□□□ 0.62
PVT1-201ENST00000504719 GSKIPQ9P0R6 139 aa18.9■□□□□ 0.62
PVT1-201ENST00000504719 PAIP2BQ9ULR5 123 aaKnown RBP18.9■□□□□ 0.62
PVT1-201ENST00000504719 IGHV7-4-1A0A0J9YVY3 117 aa18.89■□□□□ 0.61
PVT1-201ENST00000504719 IL5P05113 134 aa18.89■□□□□ 0.61
PVT1-201ENST00000504719 RAB11AP62491 216 aa18.89■□□□□ 0.61
PVT1-201ENST00000504719 TOMM20LQ6UXN7 152 aa18.89■□□□□ 0.61
PVT1-201ENST00000504719 ZBTB8BQ8NAP8 495 aaPredicted RBP18.89■□□□□ 0.61
PVT1-201ENST00000504719 ACY3Q96HD9 319 aa18.89■□□□□ 0.61
PVT1-201ENST00000504719 FAM110AQ9BQ89 295 aa18.89■□□□□ 0.61
PVT1-201ENST00000504719 PUS1Q9Y606 427 aaKnown RBP eCLIP18.89■□□□□ 0.61
PVT1-201ENST00000504719 TRAV30A0A087WSZ9 112 aa18.88■□□□□ 0.61
PVT1-201ENST00000504719 CHEK1O14757 476 aa18.88■□□□□ 0.61
PVT1-201ENST00000504719 SCGB1D2O95969 90 aa18.88■□□□□ 0.61
PVT1-201ENST00000504719 IGKV1-17P01599 117 aa18.88■□□□□ 0.61
PVT1-201ENST00000504719 RPP30P78346 268 aaKnown RBP18.88■□□□□ 0.61
PVT1-201ENST00000504719 TIGITQ495A1 244 aa18.88■□□□□ 0.61
PVT1-201ENST00000504719 NPIPB3Q92617 1050 aa18.88■□□□□ 0.61
PVT1-201ENST00000504719 GGTLC1Q9BX51 225 aa18.88■□□□□ 0.61
PVT1-201ENST00000504719 LOC102724200A0A096LPH7 203 aaPredicted RBP18.87■□□□□ 0.61
PVT1-201ENST00000504719 FAM25EA8MYX2 175 aa18.87■□□□□ 0.61
PVT1-201ENST00000504719 SSSCA1O60232 199 aa18.87■□□□□ 0.61
PVT1-201ENST00000504719 OR10J1P30954 320 aa18.87■□□□□ 0.61
PVT1-201ENST00000504719 SPANXN5Q5MJ07 72 aa18.87■□□□□ 0.61
PVT1-201ENST00000504719 RNF2Q99496 336 aa18.87■□□□□ 0.61
PVT1-201ENST00000504719 RHPN1-AS1Q9BWJ2 59 aa18.87■□□□□ 0.61
PVT1-201ENST00000504719 ZFAND3Q9H8U3 227 aa18.87■□□□□ 0.61
PVT1-201ENST00000504719 UBQLN2Q9UHD9 624 aa18.87■□□□□ 0.61
PVT1-201ENST00000504719 TRAV14DV4A0A0A6YYC5 116 aa18.86■□□□□ 0.61
PVT1-201ENST00000504719 H3BP45 60 aa18.86■□□□□ 0.61
PVT1-201ENST00000504719 IGLC1P0CG04 106 aa18.86■□□□□ 0.61
PVT1-201ENST00000504719 GPX4P36969 197 aaPredicted RBP18.86■□□□□ 0.61
PVT1-201ENST00000504719 OR1S2Q8NGQ3 325 aa18.86■□□□□ 0.61
PVT1-201ENST00000504719 GINS3Q9BRX5 216 aa18.86■□□□□ 0.61
PVT1-201ENST00000504719 CSMD3Q7Z407 3707 aa18.85■□□□□ 0.61
PVT1-201ENST00000504719 C5orf51A6NDU8 294 aa18.85■□□□□ 0.61
PVT1-201ENST00000504719 INMT-MINDY4F8WBC2 141 aa18.85■□□□□ 0.61
PVT1-201ENST00000504719 ZFAND6Q6FIF0 208 aa18.85■□□□□ 0.61
PVT1-201ENST00000504719 GPN1Q9HCN4 374 aaPredicted RBP18.85■□□□□ 0.61
PVT1-201ENST00000504719 STRAPQ9Y3F4 350 aaKnown RBP18.85■□□□□ 0.61
PVT1-201ENST00000504719 STARD9Q9P2P6 4700 aa18.85■□□□□ 0.61
PVT1-201ENST00000504719 IGHV3-49A0A0A0MS15 119 aa18.84■□□□□ 0.61
PVT1-201ENST00000504719 OR4C46A6NHA9 309 aa18.84■□□□□ 0.61
PVT1-201ENST00000504719 GAMTQ14353 236 aa18.84■□□□□ 0.61
PVT1-201ENST00000504719 ODF3L2Q3SX64 289 aa18.84■□□□□ 0.61
PVT1-201ENST00000504719 SLC35E1Q96K37 410 aa18.84■□□□□ 0.61
PVT1-201ENST00000504719 PSENENQ9NZ42 101 aa18.84■□□□□ 0.61
PVT1-201ENST00000504719 MARVELD1Q9BSK0 173 aa18.83■□□□□ 0.6
PVT1-201ENST00000504719 IGHV3OR16-13A0A075B7E8 117 aa18.82■□□□□ 0.6
PVT1-201ENST00000504719 IGHV3-74A0A0B4J1X5 117 aa18.82■□□□□ 0.6
PVT1-201ENST00000504719 PRAF2O60831 178 aa18.82■□□□□ 0.6
PVT1-201ENST00000504719 MBPP02686 304 aaPredicted RBP18.82■□□□□ 0.6
PVT1-201ENST00000504719 PAX9P55771 341 aa18.82■□□□□ 0.6
PVT1-201ENST00000504719 YPEL3P61236 119 aaPredicted RBP18.82■□□□□ 0.6
PVT1-201ENST00000504719 FAM90A2PQ658T7 463 aa18.82■□□□□ 0.6
PVT1-201ENST00000504719 SMIM8Q96KF7 97 aa18.82■□□□□ 0.6
PVT1-201ENST00000504719 RCL1Q9Y2P8 373 aaKnown RBP18.82■□□□□ 0.6
PVT1-201ENST00000504719 DYNC2H1Q8NCM8 4307 aaKnown RBP18.82■□□□□ 0.6
PVT1-201ENST00000504719 GSG1LQ6UXU4 331 aa18.81■□□□□ 0.6
PVT1-201ENST00000504719 Q8WTZ3 238 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms