RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 DEFA1P59665 94 aa16.36■□□□□ 0.21
LSM6-203ENST00000503982 DEFA3P59666 94 aa16.36■□□□□ 0.21
LSM6-203ENST00000503982 RPL11P62913 178 aaKnown RBP16.36■□□□□ 0.21
LSM6-203ENST00000503982 DHRS2Q13268 280 aa16.36■□□□□ 0.21
LSM6-203ENST00000503982 LYG2Q86SG7 212 aa16.36■□□□□ 0.21
LSM6-203ENST00000503982 OR10C1Q96KK4 312 aa16.36■□□□□ 0.21
LSM6-203ENST00000503982 IGHV3-66A0A0C4DH42 116 aa16.35■□□□□ 0.21
LSM6-203ENST00000503982 A0A0J9YWU9 116 aa16.35■□□□□ 0.21
LSM6-203ENST00000503982 CXorf65A6NEN9 183 aa16.35■□□□□ 0.21
LSM6-203ENST00000503982 DNASE2O00115 360 aaPredicted RBP16.35■□□□□ 0.21
LSM6-203ENST00000503982 TOMM20LQ6UXN7 152 aa16.35■□□□□ 0.21
LSM6-203ENST00000503982 ZNF600Q6ZNG1 722 aa16.35■□□□□ 0.21
LSM6-203ENST00000503982 Q6ZRM9 215 aa16.35■□□□□ 0.21
LSM6-203ENST00000503982 Q6ZWC4 215 aa16.35■□□□□ 0.21
LSM6-203ENST00000503982 TCF24Q7RTU0 167 aa16.35■□□□□ 0.21
LSM6-203ENST00000503982 NUDT15Q9NV35 164 aa16.35■□□□□ 0.21
LSM6-203ENST00000503982 TMED3Q9Y3Q3 217 aa16.35■□□□□ 0.21
LSM6-203ENST00000503982 PUS1Q9Y606 427 aaKnown RBP eCLIP16.35■□□□□ 0.21
LSM6-203ENST00000503982 ANXA7P20073 488 aaKnown RBP16.34■□□□□ 0.21
LSM6-203ENST00000503982 GPR146Q96CH1 333 aa16.34■□□□□ 0.21
LSM6-203ENST00000503982 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.34■□□□□ 0.21
LSM6-203ENST00000503982 KIR2DL5BA0A0G2JN68 375 aa16.33■□□□□ 0.2
LSM6-203ENST00000503982 KIR2DL5BA0A0G2JPC4 375 aa16.33■□□□□ 0.2
LSM6-203ENST00000503982 A0A1B0GU03 582 aa16.33■□□□□ 0.2
LSM6-203ENST00000503982 TMEM50AO95807 157 aa16.33■□□□□ 0.2
LSM6-203ENST00000503982 RNASE2P10153 161 aaKnown RBP16.33■□□□□ 0.2
LSM6-203ENST00000503982 ZNF124Q15973 351 aa16.33■□□□□ 0.2
LSM6-203ENST00000503982 LYZL2Q7Z4W2 148 aa16.33■□□□□ 0.2
LSM6-203ENST00000503982 KIR2DL5AQ8N109 375 aa16.33■□□□□ 0.2
LSM6-203ENST00000503982 KIR2DL5BQ8NHK3 375 aa16.33■□□□□ 0.2
LSM6-203ENST00000503982 MITD1Q8WV92 249 aa16.33■□□□□ 0.2
LSM6-203ENST00000503982 ST8SIA2Q92186 375 aa16.33■□□□□ 0.2
LSM6-203ENST00000503982 TP53TG1Q9Y2A0 90 aa16.33■□□□□ 0.2
LSM6-203ENST00000503982 H2AFB2P0C5Z0 115 aa16.32■□□□□ 0.2
LSM6-203ENST00000503982 SULT1A3P0DMM9 295 aa16.32■□□□□ 0.2
LSM6-203ENST00000503982 SULT1A4P0DMN0 295 aa16.32■□□□□ 0.2
LSM6-203ENST00000503982 COQ8AQ8NI60 647 aa16.32■□□□□ 0.2
LSM6-203ENST00000503982 ENKURQ8TC29 256 aa16.32■□□□□ 0.2
LSM6-203ENST00000503982 TMEM231Q9H6L2 316 aa16.32■□□□□ 0.2
LSM6-203ENST00000503982 HEYLQ9NQ87 328 aaPredicted RBP16.32■□□□□ 0.2
LSM6-203ENST00000503982 PRR13Q9NZ81 148 aa16.32■□□□□ 0.2
LSM6-203ENST00000503982 CACNG5Q9UF02 275 aa16.32■□□□□ 0.2
LSM6-203ENST00000503982 CEBPZOSA8MTT3 80 aa16.31■□□□□ 0.2
LSM6-203ENST00000503982 PITX3O75364 302 aa16.31■□□□□ 0.2
LSM6-203ENST00000503982 IL5P05113 134 aa16.31■□□□□ 0.2
LSM6-203ENST00000503982 CD5P06127 495 aa16.31■□□□□ 0.2
LSM6-203ENST00000503982 SPCS3P61009 180 aa16.31■□□□□ 0.2
LSM6-203ENST00000503982 SMCO1Q147U7 214 aa16.31■□□□□ 0.2
LSM6-203ENST00000503982 C4orf46Q504U0 113 aa16.31■□□□□ 0.2
LSM6-203ENST00000503982 PVRIGQ6DKI7 326 aa16.31■□□□□ 0.2
LSM6-203ENST00000503982 NRARPQ7Z6K4 114 aa16.31■□□□□ 0.2
LSM6-203ENST00000503982 NARS2Q96I59 477 aaKnown RBP16.31■□□□□ 0.2
LSM6-203ENST00000503982 ZNF414Q96IQ9 312 aa16.31■□□□□ 0.2
LSM6-203ENST00000503982 MAP6D1Q9H9H5 199 aa16.31■□□□□ 0.2
LSM6-203ENST00000503982 RABAC1Q9UI14 185 aa16.31■□□□□ 0.2
LSM6-203ENST00000503982 RPS10-NUDT3A0A1W2PQS6 291 aa16.3■□□□□ 0.2
LSM6-203ENST00000503982 CLN5O75503 358 aa16.3■□□□□ 0.2
LSM6-203ENST00000503982 APOHP02749 345 aaPredicted RBP16.3■□□□□ 0.2
LSM6-203ENST00000503982 NPPCP23582 126 aa16.3■□□□□ 0.2
LSM6-203ENST00000503982 RNF183Q96D59 192 aa16.3■□□□□ 0.2
LSM6-203ENST00000503982 MARVELD1Q9BSK0 173 aa16.3■□□□□ 0.2
LSM6-203ENST00000503982 MPTX1A8MV57 137 aa16.29■□□□□ 0.2
LSM6-203ENST00000503982 DFFBO76075 338 aa16.29■□□□□ 0.2
LSM6-203ENST00000503982 NXPH3O95157 252 aa16.29■□□□□ 0.2
LSM6-203ENST00000503982 HTR2BP41595 481 aa16.29■□□□□ 0.2
LSM6-203ENST00000503982 MLANAQ16655 118 aa16.29■□□□□ 0.2
LSM6-203ENST00000503982 BSXQ3C1V8 233 aa16.29■□□□□ 0.2
LSM6-203ENST00000503982 METTL26Q96S19 204 aa16.29■□□□□ 0.2
LSM6-203ENST00000503982 CSTL1Q9H114 145 aa16.29■□□□□ 0.2
LSM6-203ENST00000503982 ZFAND3Q9H8U3 227 aa16.29■□□□□ 0.2
LSM6-203ENST00000503982 HSPB7Q9UBY9 170 aa16.29■□□□□ 0.2
LSM6-203ENST00000503982 DNAH1Q9P2D7 4330 aa16.28■□□□□ 0.2
LSM6-203ENST00000503982 TRAV6A0A075B6T7 132 aa16.28■□□□□ 0.2
LSM6-203ENST00000503982 A0A1W2PS18 150 aa16.28■□□□□ 0.2
LSM6-203ENST00000503982 FAM90A26D6RGX4 464 aa16.28■□□□□ 0.2
LSM6-203ENST00000503982 FAM90A2PQ658T7 463 aa16.28■□□□□ 0.2
LSM6-203ENST00000503982 TMEM217Q8N7C4 229 aa16.28■□□□□ 0.2
LSM6-203ENST00000503982 ZNF431Q8TF32 576 aaPredicted RBP16.28■□□□□ 0.2
LSM6-203ENST00000503982 MS4A6AQ9H2W1 248 aa16.28■□□□□ 0.2
LSM6-203ENST00000503982 FNDC4Q9H6D8 234 aaPredicted RBP16.28■□□□□ 0.2
LSM6-203ENST00000503982 PRAF2O60831 178 aa16.27■□□□□ 0.2
LSM6-203ENST00000503982 PTTG1O95997 202 aa16.27■□□□□ 0.2
LSM6-203ENST00000503982 TNFRSF9Q07011 255 aa16.27■□□□□ 0.2
LSM6-203ENST00000503982 TIGITQ495A1 244 aa16.27■□□□□ 0.2
LSM6-203ENST00000503982 STXBP6Q8NFX7 210 aa16.27■□□□□ 0.2
LSM6-203ENST00000503982 OR4X1Q8NH49 305 aa16.27■□□□□ 0.2
LSM6-203ENST00000503982 VSIRQ9H7M9 311 aa16.27■□□□□ 0.2
LSM6-203ENST00000503982 MRPL36Q9P0J6 103 aaKnown RBP16.27■□□□□ 0.2
LSM6-203ENST00000503982 TRAV30A0A087WSZ9 112 aa16.26■□□□□ 0.19
LSM6-203ENST00000503982 NUPR2A6NF83 97 aa16.26■□□□□ 0.19
LSM6-203ENST00000503982 DEFB131AP59861 70 aa16.26■□□□□ 0.19
LSM6-203ENST00000503982 GGNBP1Q5YKI7 109 aa16.26■□□□□ 0.19
LSM6-203ENST00000503982 LEMD1Q68G75 181 aa16.26■□□□□ 0.19
LSM6-203ENST00000503982 EWSR1Q01844 656 aaKnown RBP eCLIP16.25■□□□□ 0.19
LSM6-203ENST00000503982 LILRB2Q8N423 598 aa16.25■□□□□ 0.19
LSM6-203ENST00000503982 SLC24A4Q8NFF2 622 aa16.25■□□□□ 0.19
LSM6-203ENST00000503982 GRAMD2BQ96HH9 432 aa16.25■□□□□ 0.19
LSM6-203ENST00000503982 ALMS1Q8TCU4 4167 aa16.25■□□□□ 0.19
LSM6-203ENST00000503982 PLECQ15149 4684 aaKnown RBP16.25■□□□□ 0.19
LSM6-203ENST00000503982 SNRPGP15A8MWD9 76 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms