RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 IGHV1-8P0DP01 117 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 SRSF1Q07955 248 aaKnown RBP eCLIP3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 CLEC12BQ2HXU8 276 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 KHDC1LQ5JSQ8 128 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 TPTE2P1Q5T6R2 138 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 GOLT1AQ6ZVE7 132 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 RPRMLQ8N4K4 120 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 IGKV1-27A0A075B6S5 117 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 TMEM262E9PQX1 116 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 F12P00748 615 aaPredicted RBP3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 CGAP01215 116 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 PLAURQ03405 335 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 ECSCRQ19T08 205 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 DMRTC1Q5HYR2 192 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 COA6Q5JTJ3 125 aaKnown RBP3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 LYPD6Q86Y78 171 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 HIST3H2BBQ8N257 126 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 ZCCHC24Q8N2G6 241 aaKnown RBP3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 TMEM75Q8N9X5 138 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 ZNRF1Q8ND25 227 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 SPANXCQ9NY87 97 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 PSG8Q9UQ74 426 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 PAM16Q9Y3D7 125 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 CNTRLQ7Z7A1 2325 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 TRAV39A0A0B4J263 110 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 HIST1H2BKO60814 126 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 HIST1H2BJP06899 126 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 ZNF25P17030 456 aaPredicted RBP3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 LGALS3P17931 250 aaKnown RBP3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 HIST1H2BOP23527 126 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 HIST1H2BBP33778 126 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 HIST1H2BDP58876 126 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 HIST1H2BCP62807 126 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 TFF3Q07654 80 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 HSD52Q0P140 79 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 HIST2H2BEQ16778 126 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 RPL39P5Q59GN2 51 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 ZNF833PQ6ZTB9 187 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 FAM168AQ92567 244 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 HIST1H2BHQ93079 126 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 HIST1H2BNQ99877 126 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 HIST1H2BMQ99879 126 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 C20orf144Q9BQM9 153 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 WNT10AQ9GZT5 417 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 PRO1933Q9H354 126 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 GSN-AS1Q9NRJ2 163 aa3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 CHTOPQ9Y3Y2 248 aaKnown RBP3.91□□□□□ -1.78
NDFIP1-202ENST00000503388 HUWE1Q7Z6Z7 4374 aaKnown RBP3.9□□□□□ -1.78
NDFIP1-202ENST00000503388 A0A0G2JMM0 328 aa3.9□□□□□ -1.78
NDFIP1-202ENST00000503388 A0A1W2PPB8 328 aa3.9□□□□□ -1.78
NDFIP1-202ENST00000503388 A0A1W2PRS3 328 aa3.9□□□□□ -1.78
NDFIP1-202ENST00000503388 KIR3DP1A8MWS1 328 aa3.9□□□□□ -1.78
NDFIP1-202ENST00000503388 H0YJW9 148 aa3.9□□□□□ -1.78
NDFIP1-202ENST00000503388 CEACAM4O75871 244 aa3.9□□□□□ -1.78
NDFIP1-202ENST00000503388 PF4V1P10720 104 aa3.9□□□□□ -1.78
NDFIP1-202ENST00000503388 C19orf54Q5BKX5 351 aa3.9□□□□□ -1.78
NDFIP1-202ENST00000503388 LINC01545Q5VT33 79 aa3.9□□□□□ -1.78
NDFIP1-202ENST00000503388 THAP8Q8NA92 274 aa3.9□□□□□ -1.78
NDFIP1-202ENST00000503388 RAB37Q96AX2 223 aa3.9□□□□□ -1.78
NDFIP1-202ENST00000503388 TRBV6-1A0A0K0K1D8 114 aa3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 SCO2A0A1W2PP80 73 aa3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 C15orf62A8K5M9 175 aa3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 CELA3AP09093 270 aa3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 PSMB2P49721 201 aa3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 BCL6BQ8N143 479 aaPredicted RBP3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 OR8A1Q8NGG7 326 aa3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 WIPF2Q8TF74 440 aaPredicted RBP3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 ZNF837Q96EG3 531 aaPredicted RBP3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 PGLYRP4Q96LB8 373 aa3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 GAFA1Q96PS6 74 aa3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 WFDC1Q9HC57 220 aa3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 MSRB2Q9Y3D2 182 aa3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 IGHV2-26A0A0B4J1V2 119 aa3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 NPIPB5A8MRT5 1133 aa3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 M0R3E3 92 aa3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 OR2J3O76001 311 aa3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 TRGV3P03979 118 aa3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 PLNP26678 52 aa3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 C5orf64Q2M2E5 130 aa3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 HCP5Q6MZN7 132 aa3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 ZNF562Q6V9R5 426 aa3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 IL17RELQ6ZVW7 336 aa3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 MIR17HGQ75NE6 70 aa3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 RPP25LQ8N5L8 163 aaKnown RBP3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 TPRX1Q8N7U7 411 aa3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 ZNF114Q8NC26 417 aa3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 MRAP2Q96G30 205 aa3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 CCL19Q99731 98 aa3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 NRN1Q9NPD7 142 aa3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 ZNF256Q9Y2P7 627 aaPredicted RBP3.9□□□□□ -1.79
NDFIP1-202ENST00000503388 TRBV20OR9-2A0A075B6H5 130 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 HIGD1CA8MV81 97 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 SHISA9B4DS77 424 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 ATXN7O15265 892 aaPredicted RBP3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 RNASE2P10153 161 aaKnown RBP3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 ATP5J2P56134 94 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 CR1LQ2VPA4 569 aa3.89□□□□□ -1.79
NDFIP1-202ENST00000503388 SDK1Q7Z5N4 2213 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms