RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 DEXIO95424 95 aa-0.03□□□□□ -2.41
SMAD1-203ENST00000502342 CRYZL1O95825 349 aa-0.03□□□□□ -2.41
SMAD1-203ENST00000502342 TNNC2P02585 160 aa-0.03□□□□□ -2.41
SMAD1-203ENST00000502342 OR5G3P0C626 314 aa-0.03□□□□□ -2.41
SMAD1-203ENST00000502342 YPEL3P61236 119 aaPredicted RBP-0.03□□□□□ -2.41
SMAD1-203ENST00000502342 ESRGQ1W209 222 aa-0.03□□□□□ -2.41
SMAD1-203ENST00000502342 SPOPLQ6IQ16 392 aa-0.03□□□□□ -2.41
SMAD1-203ENST00000502342 FAM151BQ6UXP7 276 aa-0.03□□□□□ -2.41
SMAD1-203ENST00000502342 ALKAL1Q6UXT8 129 aa-0.03□□□□□ -2.41
SMAD1-203ENST00000502342 C20orf196Q8IYI0 205 aa-0.03□□□□□ -2.41
SMAD1-203ENST00000502342 EXOC3-AS1Q8N2X6 119 aa-0.03□□□□□ -2.41
SMAD1-203ENST00000502342 ST6GALNAC3Q8NDV1 305 aa-0.03□□□□□ -2.41
SMAD1-203ENST00000502342 SLC35B4Q969S0 331 aa-0.03□□□□□ -2.41
SMAD1-203ENST00000502342 TSPAN32Q96QS1 320 aa-0.03□□□□□ -2.41
SMAD1-203ENST00000502342 C14orf132Q9NPU4 83 aa-0.03□□□□□ -2.41
SMAD1-203ENST00000502342 C14orf105Q9NVL8 296 aa-0.03□□□□□ -2.41
SMAD1-203ENST00000502342 TAS2R7Q9NYW3 318 aa-0.03□□□□□ -2.41
SMAD1-203ENST00000502342 USE1Q9NZ43 259 aa-0.03□□□□□ -2.41
SMAD1-203ENST00000502342 TNFSF18Q9UNG2 199 aa-0.03□□□□□ -2.41
SMAD1-203ENST00000502342 TMEM56-RWDD3S4R434 201 aa-0.03□□□□□ -2.41
SMAD1-203ENST00000502342 SBF1O95248 1867 aa-0.03□□□□□ -2.41
SMAD1-203ENST00000502342 DOCK5Q9H7D0 1870 aa-0.03□□□□□ -2.41
SMAD1-203ENST00000502342 C9orf84Q5VXU9 1444 aa-0.04□□□□□ -2.42
SMAD1-203ENST00000502342 BDP1A6H8Y1 2624 aa-0.04□□□□□ -2.42
SMAD1-203ENST00000502342 PHRF1Q9P1Y6 1649 aaKnown RBP-0.04□□□□□ -2.42
SMAD1-203ENST00000502342 IGHV1-58A0A0C4DH39 117 aa-0.04□□□□□ -2.42
SMAD1-203ENST00000502342 C7orf71A4D174 169 aa-0.04□□□□□ -2.42
SMAD1-203ENST00000502342 CCL16O15467 120 aa-0.04□□□□□ -2.42
SMAD1-203ENST00000502342 OR4E1P0C645 316 aa-0.04□□□□□ -2.42
SMAD1-203ENST00000502342 CD79AP11912 226 aa-0.04□□□□□ -2.42
SMAD1-203ENST00000502342 MAGEA2P43356 314 aa-0.04□□□□□ -2.42
SMAD1-203ENST00000502342 DEFA1P59665 94 aa-0.04□□□□□ -2.42
SMAD1-203ENST00000502342 SPCS3P61009 180 aa-0.04□□□□□ -2.42
SMAD1-203ENST00000502342 PSME3P61289 254 aa-0.04□□□□□ -2.42
SMAD1-203ENST00000502342 KRTAP26-1Q6PEX3 210 aa-0.04□□□□□ -2.42
SMAD1-203ENST00000502342 KRT222Q8N1A0 295 aa-0.04□□□□□ -2.42
SMAD1-203ENST00000502342 TMEM254Q8TBM7 123 aa-0.04□□□□□ -2.42
SMAD1-203ENST00000502342 ZFYVE26Q68DK2 2539 aa-0.05□□□□□ -2.42
SMAD1-203ENST00000502342 TNCP24821 2201 aa-0.05□□□□□ -2.42
SMAD1-203ENST00000502342 ZDBF2Q9HCK1 2354 aa-0.05□□□□□ -2.42
SMAD1-203ENST00000502342 FAM25EA8MYX2 175 aa-0.05□□□□□ -2.42
SMAD1-203ENST00000502342 NUPR1O60356 82 aa-0.05□□□□□ -2.42
SMAD1-203ENST00000502342 ISG15P05161 165 aa-0.05□□□□□ -2.42
SMAD1-203ENST00000502342 ANP32AP39687 249 aaKnown RBP-0.05□□□□□ -2.42
SMAD1-203ENST00000502342 RPL5P46777 297 aaKnown RBP-0.05□□□□□ -2.42
SMAD1-203ENST00000502342 RHOBP62745 196 aa-0.05□□□□□ -2.42
SMAD1-203ENST00000502342 TSNQ15631 228 aaKnown RBP-0.05□□□□□ -2.42
SMAD1-203ENST00000502342 C6orf52Q5T4I8 152 aa-0.05□□□□□ -2.42
SMAD1-203ENST00000502342 HAGHLQ6PII5 290 aaPredicted RBP-0.05□□□□□ -2.42
SMAD1-203ENST00000502342 Q6ZS92 163 aa-0.05□□□□□ -2.42
SMAD1-203ENST00000502342 GRINAQ7Z429 371 aa-0.05□□□□□ -2.42
SMAD1-203ENST00000502342 OR52R1Q8NGF1 315 aa-0.05□□□□□ -2.42
SMAD1-203ENST00000502342 OR2T10Q8NGZ9 312 aa-0.05□□□□□ -2.42
SMAD1-203ENST00000502342 OR52E6Q96RD3 313 aa-0.05□□□□□ -2.42
SMAD1-203ENST00000502342 HIST1H2BLQ99880 126 aa-0.05□□□□□ -2.42
SMAD1-203ENST00000502342 MRPS26Q9BYN8 205 aaKnown RBP-0.05□□□□□ -2.42
SMAD1-203ENST00000502342 ORMDL1Q9P0S3 153 aa-0.05□□□□□ -2.42
SMAD1-203ENST00000502342 PKIGQ9Y2B9 76 aa-0.05□□□□□ -2.42
SMAD1-203ENST00000502342 UTP11Q9Y3A2 253 aaKnown RBP-0.05□□□□□ -2.42
SMAD1-203ENST00000502342 SCN10AQ9Y5Y9 1956 aa-0.05□□□□□ -2.42
SMAD1-203ENST00000502342 SSPOA2VEC9 5147 aa-0.05□□□□□ -2.42
SMAD1-203ENST00000502342 MEGF8Q7Z7M0 2845 aa-0.05□□□□□ -2.42
SMAD1-203ENST00000502342 NUP155O75694 1391 aa-0.06□□□□□ -2.42
SMAD1-203ENST00000502342 CITO14578 2027 aa-0.06□□□□□ -2.42
SMAD1-203ENST00000502342 MED1Q15648 1581 aaPredicted RBP-0.06□□□□□ -2.42
SMAD1-203ENST00000502342 A0A087X0T9 212 aa-0.06□□□□□ -2.42
SMAD1-203ENST00000502342 IGLV3-32A0A0A0MS00 114 aa-0.06□□□□□ -2.42
SMAD1-203ENST00000502342 TCRBV4S1A1TA0A5B7 111 aa-0.06□□□□□ -2.42
SMAD1-203ENST00000502342 SMIM9A6NGZ8 99 aa-0.06□□□□□ -2.42
SMAD1-203ENST00000502342 C1orf196B1AJZ1 125 aa-0.06□□□□□ -2.42
SMAD1-203ENST00000502342 DCTN3O75935 186 aa-0.06□□□□□ -2.42
SMAD1-203ENST00000502342 OR2J2O76002 312 aa-0.06□□□□□ -2.42
SMAD1-203ENST00000502342 GADD45GO95257 159 aa-0.06□□□□□ -2.42
SMAD1-203ENST00000502342 AHSA1O95433 338 aa-0.06□□□□□ -2.42
SMAD1-203ENST00000502342 CALB1P05937 261 aa-0.06□□□□□ -2.42
SMAD1-203ENST00000502342 SPINT3P49223 89 aa-0.06□□□□□ -2.42
SMAD1-203ENST00000502342 ZNF137PP52743 207 aa-0.06□□□□□ -2.42
SMAD1-203ENST00000502342 RPS20P60866 119 aaKnown RBP-0.06□□□□□ -2.42
SMAD1-203ENST00000502342 LINC01554Q52M75 96 aa-0.06□□□□□ -2.42
SMAD1-203ENST00000502342 C2orf82Q6UX34 121 aa-0.06□□□□□ -2.42
SMAD1-203ENST00000502342 PPP1R2P1Q96PQ5 205 aa-0.06□□□□□ -2.42
SMAD1-203ENST00000502342 BCL2L10Q9HD36 194 aa-0.06□□□□□ -2.42
SMAD1-203ENST00000502342 MED29Q9NX70 200 aa-0.06□□□□□ -2.42
SMAD1-203ENST00000502342 UBAP1Q9NZ09 502 aa-0.06□□□□□ -2.42
SMAD1-203ENST00000502342 TNS3Q68CZ2 1445 aa-0.06□□□□□ -2.42
SMAD1-203ENST00000502342 KIAA1549Q9HCM3 1950 aa-0.06□□□□□ -2.42
SMAD1-203ENST00000502342 PTPRZ1P23471 2315 aaPredicted RBP-0.07□□□□□ -2.42
SMAD1-203ENST00000502342 PIRO00625 290 aa-0.07□□□□□ -2.42
SMAD1-203ENST00000502342 RBP1P09455 135 aa-0.07□□□□□ -2.42
SMAD1-203ENST00000502342 HIST1H1TP22492 207 aaPredicted RBP-0.07□□□□□ -2.42
SMAD1-203ENST00000502342 CASP1P29466 404 aa-0.07□□□□□ -2.42
SMAD1-203ENST00000502342 HIST3H3Q16695 136 aa-0.07□□□□□ -2.42
SMAD1-203ENST00000502342 CDKL4Q5MAI5 379 aa-0.07□□□□□ -2.42
SMAD1-203ENST00000502342 C8orf74Q6P047 294 aa-0.07□□□□□ -2.42
SMAD1-203ENST00000502342 SPINK6Q6UWN8 80 aa-0.07□□□□□ -2.42
SMAD1-203ENST00000502342 TMEM86BQ8N661 226 aa-0.07□□□□□ -2.42
SMAD1-203ENST00000502342 OR52L1Q8NGH7 329 aa-0.07□□□□□ -2.42
SMAD1-203ENST00000502342 OR2T35Q8NGX2 323 aa-0.07□□□□□ -2.42
SMAD1-203ENST00000502342 PSMF1Q92530 271 aa-0.07□□□□□ -2.42
SMAD1-203ENST00000502342 NABP2Q9BQ15 211 aa-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms