RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 WDR12Q9GZL7 423 aaKnown RBP9.61□□□□□ -0.87
HSPG2-213ENST00000498495 MAGT1Q9H0U3 335 aa9.61□□□□□ -0.87
HSPG2-213ENST00000498495 ZMAT4Q9H898 229 aa9.61□□□□□ -0.87
HSPG2-213ENST00000498495 PAIP2BQ9ULR5 123 aaKnown RBP9.61□□□□□ -0.87
HSPG2-213ENST00000498495 U3KQK5 164 aa9.61□□□□□ -0.87
HSPG2-213ENST00000498495 TGP01266 2768 aa9.6□□□□□ -0.87
HSPG2-213ENST00000498495 IGHV3OR16-13A0A075B7E8 117 aa9.6□□□□□ -0.87
HSPG2-213ENST00000498495 IGHV3-74A0A0B4J1X5 117 aa9.6□□□□□ -0.87
HSPG2-213ENST00000498495 WRBO00258 174 aa9.6□□□□□ -0.87
HSPG2-213ENST00000498495 TSPAN4O14817 238 aa9.6□□□□□ -0.87
HSPG2-213ENST00000498495 NPPCP23582 126 aa9.6□□□□□ -0.87
HSPG2-213ENST00000498495 OR10J1P30954 320 aa9.6□□□□□ -0.87
HSPG2-213ENST00000498495 GPX4P36969 197 aaPredicted RBP9.6□□□□□ -0.87
HSPG2-213ENST00000498495 DEFB125Q8N687 156 aa9.6□□□□□ -0.87
HSPG2-213ENST00000498495 NPIPB3Q92617 1050 aa9.6□□□□□ -0.87
HSPG2-213ENST00000498495 ACY3Q96HD9 319 aa9.6□□□□□ -0.87
HSPG2-213ENST00000498495 RNF2Q99496 336 aa9.6□□□□□ -0.87
HSPG2-213ENST00000498495 ZFAND3Q9H8U3 227 aa9.6□□□□□ -0.87
HSPG2-213ENST00000498495 A0A1W2PS18 150 aa9.59□□□□□ -0.87
HSPG2-213ENST00000498495 MPTX1A8MV57 137 aa9.59□□□□□ -0.87
HSPG2-213ENST00000498495 IGKV1-17P01599 117 aa9.59□□□□□ -0.87
HSPG2-213ENST00000498495 H2AFB2P0C5Z0 115 aa9.59□□□□□ -0.87
HSPG2-213ENST00000498495 IGLC1P0CG04 106 aa9.59□□□□□ -0.87
HSPG2-213ENST00000498495 NKX2-1P43699 371 aaPredicted RBP9.59□□□□□ -0.87
HSPG2-213ENST00000498495 YPEL3P61236 119 aaPredicted RBP9.59□□□□□ -0.87
HSPG2-213ENST00000498495 ID3Q02535 119 aa9.59□□□□□ -0.87
HSPG2-213ENST00000498495 MITD1Q8WV92 249 aa9.59□□□□□ -0.87
HSPG2-213ENST00000498495 METTL26Q96S19 204 aa9.59□□□□□ -0.87
HSPG2-213ENST00000498495 NUDT15Q9NV35 164 aa9.59□□□□□ -0.87
HSPG2-213ENST00000498495 OR4C46A6NHA9 309 aa9.58□□□□□ -0.88
HSPG2-213ENST00000498495 UPK1BO75841 260 aa9.58□□□□□ -0.88
HSPG2-213ENST00000498495 APOHP02749 345 aaPredicted RBP9.58□□□□□ -0.88
HSPG2-213ENST00000498495 CD5P06127 495 aa9.58□□□□□ -0.88
HSPG2-213ENST00000498495 PAFAH1B2P68402 229 aa9.58□□□□□ -0.88
HSPG2-213ENST00000498495 HAGHQ16775 308 aa9.58□□□□□ -0.88
HSPG2-213ENST00000498495 SPANXN5Q5MJ07 72 aa9.58□□□□□ -0.88
HSPG2-213ENST00000498495 ST8SIA2Q92186 375 aa9.58□□□□□ -0.88
HSPG2-213ENST00000498495 SLC35E1Q96K37 410 aa9.58□□□□□ -0.88
HSPG2-213ENST00000498495 WFDC10AQ9H1F0 79 aa9.58□□□□□ -0.88
HSPG2-213ENST00000498495 TMEM231Q9H6L2 316 aa9.58□□□□□ -0.88
HSPG2-213ENST00000498495 SRD5A3Q9H8P0 318 aa9.58□□□□□ -0.88
HSPG2-213ENST00000498495 GSKIPQ9P0R6 139 aa9.58□□□□□ -0.88
HSPG2-213ENST00000498495 TBC1D24Q9ULP9 559 aa9.58□□□□□ -0.88
HSPG2-213ENST00000498495 IGKV3-7A0A075B6H7 116 aa9.57□□□□□ -0.88
HSPG2-213ENST00000498495 IGHV3-66A0A0C4DH42 116 aa9.57□□□□□ -0.88
HSPG2-213ENST00000498495 RD3LP0DJH9 198 aa9.57□□□□□ -0.88
HSPG2-213ENST00000498495 POLR2GP62487 172 aaKnown RBP eCLIP9.57□□□□□ -0.88
HSPG2-213ENST00000498495 RPL11P62913 178 aaKnown RBP9.57□□□□□ -0.88
HSPG2-213ENST00000498495 ASAH1Q13510 395 aa9.57□□□□□ -0.88
HSPG2-213ENST00000498495 GAMTQ14353 236 aa9.57□□□□□ -0.88
HSPG2-213ENST00000498495 IAH1Q2TAA2 248 aaPredicted RBP9.57□□□□□ -0.88
HSPG2-213ENST00000498495 TCF24Q7RTU0 167 aa9.57□□□□□ -0.88
HSPG2-213ENST00000498495 OR4D5Q8NGN0 318 aa9.57□□□□□ -0.88
HSPG2-213ENST00000498495 ZNF431Q8TF32 576 aaPredicted RBP9.57□□□□□ -0.88
HSPG2-213ENST00000498495 NARS2Q96I59 477 aaKnown RBP9.57□□□□□ -0.88
HSPG2-213ENST00000498495 WWC2-AS2Q96NR7 200 aa9.57□□□□□ -0.88
HSPG2-213ENST00000498495 RCHY1Q96PM5 261 aa9.57□□□□□ -0.88
HSPG2-213ENST00000498495 VSIRQ9H7M9 311 aa9.57□□□□□ -0.88
HSPG2-213ENST00000498495 PSENENQ9NZ42 101 aa9.57□□□□□ -0.88
HSPG2-213ENST00000498495 UBQLN2Q9UHD9 624 aa9.57□□□□□ -0.88
HSPG2-213ENST00000498495 STRAPQ9Y3F4 350 aaKnown RBP9.57□□□□□ -0.88
HSPG2-213ENST00000498495 DNAH9Q9NYC9 4486 aa9.56□□□□□ -0.88
HSPG2-213ENST00000498495 ZFP92A6NM28 416 aa9.56□□□□□ -0.88
HSPG2-213ENST00000498495 DFFBO76075 338 aa9.56□□□□□ -0.88
HSPG2-213ENST00000498495 SCGB1D2O95969 90 aa9.56□□□□□ -0.88
HSPG2-213ENST00000498495 TOMM40O96008 361 aa9.56□□□□□ -0.88
HSPG2-213ENST00000498495 CRYBB3P26998 211 aa9.56□□□□□ -0.88
HSPG2-213ENST00000498495 TFPI2P48307 235 aa9.56□□□□□ -0.88
HSPG2-213ENST00000498495 CMC4P56277 68 aaPredicted RBP9.56□□□□□ -0.88
HSPG2-213ENST00000498495 FAM90A2PQ658T7 463 aa9.56□□□□□ -0.88
HSPG2-213ENST00000498495 LINC00322Q6ZN03 302 aaPredicted RBP9.56□□□□□ -0.88
HSPG2-213ENST00000498495 LILRB2Q8N423 598 aa9.56□□□□□ -0.88
HSPG2-213ENST00000498495 GBGT1Q8N5D6 347 aa9.56□□□□□ -0.88
HSPG2-213ENST00000498495 C12orf45Q8N5I9 185 aaPredicted RBP9.56□□□□□ -0.88
HSPG2-213ENST00000498495 ENKURQ8TC29 256 aa9.56□□□□□ -0.88
HSPG2-213ENST00000498495 SEC22CQ9BRL7 303 aa9.56□□□□□ -0.88
HSPG2-213ENST00000498495 TM2D3Q9BRN9 247 aa9.56□□□□□ -0.88
HSPG2-213ENST00000498495 RBMY1BA6NDE4 496 aaKnown RBP9.55□□□□□ -0.88
HSPG2-213ENST00000498495 RBMY1EA6NEQ0 496 aaKnown RBP9.55□□□□□ -0.88
HSPG2-213ENST00000498495 FAM25EA8MYX2 175 aa9.55□□□□□ -0.88
HSPG2-213ENST00000498495 H3BP45 60 aa9.55□□□□□ -0.88
HSPG2-213ENST00000498495 DNASE2O00115 360 aaPredicted RBP9.55□□□□□ -0.88
HSPG2-213ENST00000498495 IL4P05112 153 aa9.55□□□□□ -0.88
HSPG2-213ENST00000498495 HNRNPCP07910 306 aaKnown RBP eCLIP9.55□□□□□ -0.88
HSPG2-213ENST00000498495 RBMY1DP0C7P1 496 aaKnown RBP9.55□□□□□ -0.88
HSPG2-213ENST00000498495 PSG1P11464 419 aa9.55□□□□□ -0.88
HSPG2-213ENST00000498495 WFDC3Q8IUB2 231 aa9.55□□□□□ -0.88
HSPG2-213ENST00000498495 ZBTB8BQ8NAP8 495 aaPredicted RBP9.55□□□□□ -0.88
HSPG2-213ENST00000498495 GRAMD2BQ96HH9 432 aa9.55□□□□□ -0.88
HSPG2-213ENST00000498495 SMIM8Q96KF7 97 aa9.55□□□□□ -0.88
HSPG2-213ENST00000498495 SPATA25Q9BR10 227 aa9.55□□□□□ -0.88
HSPG2-213ENST00000498495 LOC102724200A0A096LPH7 203 aaPredicted RBP9.54□□□□□ -0.88
HSPG2-213ENST00000498495 C5orf51A6NDU8 294 aa9.54□□□□□ -0.88
HSPG2-213ENST00000498495 SSSCA1O60232 199 aa9.54□□□□□ -0.88
HSPG2-213ENST00000498495 FABP1P07148 127 aa9.54□□□□□ -0.88
HSPG2-213ENST00000498495 IFITM3Q01628 133 aa9.54□□□□□ -0.88
HSPG2-213ENST00000498495 OR51G1Q8NGK1 321 aa9.54□□□□□ -0.88
HSPG2-213ENST00000498495 RAB40CQ96S21 281 aa9.54□□□□□ -0.88
HSPG2-213ENST00000498495 SNRPGP15A8MWD9 76 aa9.53□□□□□ -0.88
HSPG2-213ENST00000498495 CCSO14618 274 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms