RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 MPDU1O75352 247 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 CDRT1O95170 752 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 SIX6O95475 246 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 RAB36O95755 333 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 OXTP01178 125 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 IGF2P01344 180 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 IGLV3-25P01717 112 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 CD8AP01732 235 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 HLA-HP01893 362 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 PMP2P02689 132 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 C1QCP02747 245 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 MT-ND4P03905 459 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 CD74P04233 296 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 IL4P05112 153 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 DBIP07108 87 aaKnown RBP1.47□□□□□ -2.17
CBX3-208ENST00000497498 MMP7P09237 267 aaPredicted RBP1.47□□□□□ -2.17
CBX3-208ENST00000497498 SMIM10L2AP0DMW4 78 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 SMIM10L2BP0DMW5 78 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 CD79AP11912 226 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 CTSEP14091 401 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 FABP4P15090 132 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 ATF1P18846 271 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 CXCL2P19875 107 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 NFYBP25208 207 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 CD70P32970 193 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 OPRK1P41145 380 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 GPR1P46091 355 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 GNG4P50150 75 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 SULT1A1P50225 295 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 POLR2HP52434 150 aaKnown RBP1.47□□□□□ -2.17
CBX3-208ENST00000497498 AKR1C2P52895 323 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 TCL1AP56279 114 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 NDUFA6P56556 154 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 TMEM33P57088 247 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 SYNJ2BPP57105 145 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 SMIM11AP58511 58 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 SELENOWP63302 87 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 PAFAH1B2P68402 229 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 PRR3P79522 188 aaKnown RBP1.47□□□□□ -2.17
CBX3-208ENST00000497498 RHOGP84095 191 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 FAM3AP98173 230 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 HOXC5Q00444 222 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 AESQ08117 197 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 ST3GAL4Q11206 333 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 ZNF235Q14590 738 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 HIST3H3Q16695 136 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 IAH1Q2TAA2 248 aaPredicted RBP1.47□□□□□ -2.17
CBX3-208ENST00000497498 TMEM249Q2WGJ8 235 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 ARHGAP11BQ3KRB8 267 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 ATP6AP1LQ52LC2 224 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 PDZD11Q5EBL8 140 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 NCMAPQ5T1S8 102 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 HENMT1Q5T8I9 393 aaKnown RBP1.47□□□□□ -2.17
CBX3-208ENST00000497498 FAM78BQ5VT40 261 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 HBMQ6B0K9 141 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 OR2T5Q6IEZ7 315 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 MRPL54Q6P161 138 aaKnown RBP1.47□□□□□ -2.17
CBX3-208ENST00000497498 FAHD1Q6P587 224 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 CD200R1LQ6Q8B3 271 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 ZNF705AQ6ZN79 300 aaPredicted RBP1.47□□□□□ -2.17
CBX3-208ENST00000497498 ZCCHC23Q6ZST2 131 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 SLC36A1Q7Z2H8 476 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 SLC35E3Q7Z769 313 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 CALHM3Q86XJ0 350 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 CMTM8Q8IZV2 173 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 ZNF439Q8NDP4 499 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 OR5A1Q8NGJ0 315 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 OR5D16Q8NGK9 328 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 OR6K2Q8NGY2 324 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 OR13G1Q8NGZ3 307 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 OR2T29Q8NH02 315 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 HAVCR2Q8TDQ0 301 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 SMIM4Q8WVI0 70 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 TNFAIP8L1Q8WVP5 186 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 TMEM239Q8WW34 195 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 PSMF1Q92530 271 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 PPCDCQ96CD2 204 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 CPNE2Q96FN4 548 aaPredicted RBP1.47□□□□□ -2.17
CBX3-208ENST00000497498 PYURFQ96I23 114 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 JSRP1Q96MG2 331 aaPredicted RBP1.47□□□□□ -2.17
CBX3-208ENST00000497498 PRAP1Q96NZ9 151 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 SIGMAR1Q99720 223 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 RNF5Q99942 180 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 SLC25A21Q9BQT8 299 aaPredicted RBP1.47□□□□□ -2.17
CBX3-208ENST00000497498 FAAP24Q9BTP7 215 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 VAMP8Q9BV40 100 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 TLNRD1Q9H1K6 362 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 OR51I1Q9H343 314 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 PRO1933Q9H354 126 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 CST9LQ9H4G1 147 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 WDR54Q9H977 334 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 PLEKHA1Q9HB21 404 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 PARP11Q9NR21 331 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 SPANXB1Q9NS25 103 aaPredicted RBP1.47□□□□□ -2.17
CBX3-208ENST00000497498 TMEM100Q9NV29 134 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 PLEKHJ1Q9NW61 149 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 RBM22Q9NW64 420 aaKnown RBP eCLIP1.47□□□□□ -2.171e-7■■■□□ 18
CBX3-208ENST00000497498 TXNL4BQ9NX01 149 aaKnown RBP1.47□□□□□ -2.17
CBX3-208ENST00000497498 MED29Q9NX70 200 aa1.47□□□□□ -2.17
CBX3-208ENST00000497498 ZNF586Q9NXT0 402 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms