RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 GINS3Q9BRX5 216 aa8.66□□□□□ -1.02
HLA-B-254ENST00000497377 YIF1AO95070 293 aa8.65□□□□□ -1.02
HLA-B-254ENST00000497377 GPX4P36969 197 aaPredicted RBP8.65□□□□□ -1.02
HLA-B-254ENST00000497377 NKX2-1P43699 371 aaPredicted RBP8.65□□□□□ -1.02
HLA-B-254ENST00000497377 ID3Q02535 119 aa8.65□□□□□ -1.02
HLA-B-254ENST00000497377 CD69Q07108 199 aa8.65□□□□□ -1.02
HLA-B-254ENST00000497377 PRSS54Q6PEW0 395 aa8.65□□□□□ -1.02
HLA-B-254ENST00000497377 BTNL8Q6UX41 500 aa8.65□□□□□ -1.02
HLA-B-254ENST00000497377 OR52B4Q8NGK2 314 aa8.65□□□□□ -1.02
HLA-B-254ENST00000497377 OR1S2Q8NGQ3 325 aa8.65□□□□□ -1.02
HLA-B-254ENST00000497377 MLXQ9UH92 298 aa8.65□□□□□ -1.02
HLA-B-254ENST00000497377 IZUMO1RA6ND01 250 aa8.64□□□□□ -1.03
HLA-B-254ENST00000497377 ZNF785A8K8V0 405 aa8.64□□□□□ -1.03
HLA-B-254ENST00000497377 A8MZ25 164 aa8.64□□□□□ -1.03
HLA-B-254ENST00000497377 WRBO00258 174 aa8.64□□□□□ -1.03
HLA-B-254ENST00000497377 IL5P05113 134 aa8.64□□□□□ -1.03
HLA-B-254ENST00000497377 IAPPP10997 89 aa8.64□□□□□ -1.03
HLA-B-254ENST00000497377 EDN2P20800 178 aa8.64□□□□□ -1.03
HLA-B-254ENST00000497377 RND2P52198 227 aa8.64□□□□□ -1.03
HLA-B-254ENST00000497377 YPEL3P61236 119 aaPredicted RBP8.64□□□□□ -1.03
HLA-B-254ENST00000497377 MLANAQ16655 118 aa8.64□□□□□ -1.03
HLA-B-254ENST00000497377 IAH1Q2TAA2 248 aaPredicted RBP8.64□□□□□ -1.03
HLA-B-254ENST00000497377 LAMTOR1Q6IAA8 161 aa8.64□□□□□ -1.03
HLA-B-254ENST00000497377 RBPMS2Q6ZRY4 209 aaKnown RBP8.64□□□□□ -1.03
HLA-B-254ENST00000497377 SLC16A13Q7RTY0 426 aa8.64□□□□□ -1.03
HLA-B-254ENST00000497377 TMEM61Q8N0U2 210 aa8.64□□□□□ -1.03
HLA-B-254ENST00000497377 Q8N1Y9 231 aa8.64□□□□□ -1.03
HLA-B-254ENST00000497377 OR4D5Q8NGN0 318 aa8.64□□□□□ -1.03
HLA-B-254ENST00000497377 ZNF414Q96IQ9 312 aa8.64□□□□□ -1.03
HLA-B-254ENST00000497377 MRPL36Q9P0J6 103 aaKnown RBP8.64□□□□□ -1.03
HLA-B-254ENST00000497377 SMPXQ9UHP9 88 aa8.64□□□□□ -1.03
HLA-B-254ENST00000497377 TRAV14DV4A0A0A6YYC5 116 aa8.63□□□□□ -1.03
HLA-B-254ENST00000497377 IGHV7-4-1A0A0J9YVY3 117 aa8.63□□□□□ -1.03
HLA-B-254ENST00000497377 MPTX1A8MV57 137 aa8.63□□□□□ -1.03
HLA-B-254ENST00000497377 IGKV1-17P01599 117 aa8.63□□□□□ -1.03
HLA-B-254ENST00000497377 CD5P06127 495 aa8.63□□□□□ -1.03
HLA-B-254ENST00000497377 IGLC1P0CG04 106 aa8.63□□□□□ -1.03
HLA-B-254ENST00000497377 NHLRC4P0CG21 123 aaPredicted RBP8.63□□□□□ -1.03
HLA-B-254ENST00000497377 OR10J1P30954 320 aa8.63□□□□□ -1.03
HLA-B-254ENST00000497377 IFITM3Q01628 133 aa8.63□□□□□ -1.03
HLA-B-254ENST00000497377 GUCA2BQ16661 112 aa8.63□□□□□ -1.03
HLA-B-254ENST00000497377 C11orf87Q6NUJ2 197 aa8.63□□□□□ -1.03
HLA-B-254ENST00000497377 TOMM20LQ6UXN7 152 aa8.63□□□□□ -1.03
HLA-B-254ENST00000497377 C12orf45Q8N5I9 185 aaPredicted RBP8.63□□□□□ -1.03
HLA-B-254ENST00000497377 WDR89Q96FK6 387 aaPredicted RBP8.63□□□□□ -1.03
HLA-B-254ENST00000497377 SPAG8Q99932 426 aaPredicted RBP8.63□□□□□ -1.03
HLA-B-254ENST00000497377 SEC22CQ9BRL7 303 aa8.63□□□□□ -1.03
HLA-B-254ENST00000497377 MAGT1Q9H0U3 335 aa8.63□□□□□ -1.03
HLA-B-254ENST00000497377 GPN1Q9HCN4 374 aaPredicted RBP8.63□□□□□ -1.03
HLA-B-254ENST00000497377 STRAPQ9Y3F4 350 aaKnown RBP8.63□□□□□ -1.03
HLA-B-254ENST00000497377 PUS1Q9Y606 427 aaKnown RBP eCLIP8.63□□□□□ -1.03
HLA-B-254ENST00000497377 TSPAN4O14817 238 aa8.62□□□□□ -1.03
HLA-B-254ENST00000497377 PRAF2O60831 178 aa8.62□□□□□ -1.03
HLA-B-254ENST00000497377 FABP1P07148 127 aa8.62□□□□□ -1.03
HLA-B-254ENST00000497377 IGHV4-30-4P0DP06 118 aa8.62□□□□□ -1.03
HLA-B-254ENST00000497377 TAS2R30P59541 319 aa8.62□□□□□ -1.03
HLA-B-254ENST00000497377 POLR2GP62487 172 aaKnown RBP eCLIP8.62□□□□□ -1.03
HLA-B-254ENST00000497377 ZBTB8BQ8NAP8 495 aaPredicted RBP8.62□□□□□ -1.03
HLA-B-254ENST00000497377 Q8WTZ3 238 aa8.62□□□□□ -1.03
HLA-B-254ENST00000497377 NPIPB3Q92617 1050 aa8.62□□□□□ -1.03
HLA-B-254ENST00000497377 ACY3Q96HD9 319 aa8.62□□□□□ -1.03
HLA-B-254ENST00000497377 NARS2Q96I59 477 aaKnown RBP8.62□□□□□ -1.03
HLA-B-254ENST00000497377 SLC35E1Q96K37 410 aa8.62□□□□□ -1.03
HLA-B-254ENST00000497377 SMIM8Q96KF7 97 aa8.62□□□□□ -1.03
HLA-B-254ENST00000497377 RAB40CQ96S21 281 aa8.62□□□□□ -1.03
HLA-B-254ENST00000497377 NEURL2Q9BR09 285 aa8.62□□□□□ -1.03
HLA-B-254ENST00000497377 RHPN1-AS1Q9BWJ2 59 aa8.62□□□□□ -1.03
HLA-B-254ENST00000497377 TMEM231Q9H6L2 316 aa8.62□□□□□ -1.03
HLA-B-254ENST00000497377 IGHV3OR16-8A0A075B7F1 116 aa8.61□□□□□ -1.03
HLA-B-254ENST00000497377 A0A1W2PS18 150 aa8.61□□□□□ -1.03
HLA-B-254ENST00000497377 SNRPGP15A8MWD9 76 aa8.61□□□□□ -1.03
HLA-B-254ENST00000497377 CHEK1O14757 476 aa8.61□□□□□ -1.03
HLA-B-254ENST00000497377 ZNF207O43670 478 aaKnown RBP8.61□□□□□ -1.03
HLA-B-254ENST00000497377 SCAF4O95104 1147 aaKnown RBP8.61□□□□□ -1.03
HLA-B-254ENST00000497377 NPPCP23582 126 aa8.61□□□□□ -1.03
HLA-B-254ENST00000497377 CD81P60033 236 aa8.61□□□□□ -1.03
HLA-B-254ENST00000497377 GAMTQ14353 236 aa8.61□□□□□ -1.03
HLA-B-254ENST00000497377 TIGITQ495A1 244 aa8.61□□□□□ -1.03
HLA-B-254ENST00000497377 SPANXN5Q5MJ07 72 aa8.61□□□□□ -1.03
HLA-B-254ENST00000497377 NRARPQ7Z6K4 114 aa8.61□□□□□ -1.03
HLA-B-254ENST00000497377 METTL26Q96S19 204 aa8.61□□□□□ -1.03
HLA-B-254ENST00000497377 C19orf73Q9NVV2 129 aa8.61□□□□□ -1.03
HLA-B-254ENST00000497377 PSENENQ9NZ42 101 aa8.61□□□□□ -1.03
HLA-B-254ENST00000497377 GSKIPQ9P0R6 139 aa8.61□□□□□ -1.03
HLA-B-254ENST00000497377 PAIP2BQ9ULR5 123 aaKnown RBP8.61□□□□□ -1.03
HLA-B-254ENST00000497377 COL7A1Q02388 2944 aa8.6□□□□□ -1.03
HLA-B-254ENST00000497377 C5orf51A6NDU8 294 aa8.6□□□□□ -1.03
HLA-B-254ENST00000497377 ZFP92A6NM28 416 aa8.6□□□□□ -1.03
HLA-B-254ENST00000497377 SSSCA1O60232 199 aa8.6□□□□□ -1.03
HLA-B-254ENST00000497377 TSC22D2O75157 780 aa8.6□□□□□ -1.03
HLA-B-254ENST00000497377 SCGB1D2O95969 90 aa8.6□□□□□ -1.03
HLA-B-254ENST00000497377 TOMM40O96008 361 aa8.6□□□□□ -1.03
HLA-B-254ENST00000497377 FRMD6-AS1P0C7T7 363 aa8.6□□□□□ -1.03
HLA-B-254ENST00000497377 RD3LP0DJH9 198 aa8.6□□□□□ -1.03
HLA-B-254ENST00000497377 CRYBB3P26998 211 aa8.6□□□□□ -1.03
HLA-B-254ENST00000497377 GSG1LQ6UXU4 331 aa8.6□□□□□ -1.03
HLA-B-254ENST00000497377 C2orf50Q96LR7 162 aa8.6□□□□□ -1.03
HLA-B-254ENST00000497377 MARVELD1Q9BSK0 173 aa8.6□□□□□ -1.03
HLA-B-254ENST00000497377 VSIRQ9H7M9 311 aa8.6□□□□□ -1.03
HLA-B-254ENST00000497377 TUBA4BQ9H853 241 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms