RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 C10orf105Q8TEF2 133 aa1.34□□□□□ -2.19
SMC4-225ENST00000497203 SLC50A1Q9BRV3 221 aa1.34□□□□□ -2.19
SMC4-225ENST00000497203 TAS2R4Q9NYW5 299 aa1.34□□□□□ -2.19
SMC4-225ENST00000497203 EPDR1Q9UM22 224 aa1.34□□□□□ -2.19
SMC4-225ENST00000497203 SCN10AQ9Y5Y9 1956 aa1.34□□□□□ -2.2
SMC4-225ENST00000497203 HECW1Q76N89 1606 aa1.33□□□□□ -2.2
SMC4-225ENST00000497203 IGKV1D-42A0A075B6H8 117 aa1.33□□□□□ -2.2
SMC4-225ENST00000497203 C7orf71A4D174 169 aa1.33□□□□□ -2.2
SMC4-225ENST00000497203 SERPINA1P01009 418 aa1.33□□□□□ -2.2
SMC4-225ENST00000497203 CST2P09228 141 aa1.33□□□□□ -2.2
SMC4-225ENST00000497203 MIFP14174 115 aa1.33□□□□□ -2.2
SMC4-225ENST00000497203 ERP29P30040 261 aaKnown RBP1.33□□□□□ -2.2
SMC4-225ENST00000497203 LYRM7Q5U5X0 104 aa1.33□□□□□ -2.2
SMC4-225ENST00000497203 LCA10Q71F78 164 aa1.33□□□□□ -2.2
SMC4-225ENST00000497203 OR11H6Q8NGC7 330 aa1.33□□□□□ -2.2
SMC4-225ENST00000497203 SLC25A40Q8TBP6 338 aa1.33□□□□□ -2.2
SMC4-225ENST00000497203 FAM172AQ8WUF8 416 aa1.33□□□□□ -2.2
SMC4-225ENST00000497203 TRABDQ9H4I3 376 aa1.33□□□□□ -2.2
SMC4-225ENST00000497203 PARVBQ9HBI1 364 aa1.33□□□□□ -2.2
SMC4-225ENST00000497203 KIF1BO60333 1816 aa1.32□□□□□ -2.2
SMC4-225ENST00000497203 OR4E1P0C645 316 aa1.32□□□□□ -2.2
SMC4-225ENST00000497203 HOXA6P31267 233 aa1.32□□□□□ -2.2
SMC4-225ENST00000497203 OR52R1Q8NGF1 315 aa1.32□□□□□ -2.2
SMC4-225ENST00000497203 AQP3Q92482 292 aa1.32□□□□□ -2.2
SMC4-225ENST00000497203 GPR146Q96CH1 333 aa1.32□□□□□ -2.2
SMC4-225ENST00000497203 REG4Q9BYZ8 158 aa1.32□□□□□ -2.2
SMC4-225ENST00000497203 SLC35A3Q9Y2D2 325 aa1.32□□□□□ -2.2
SMC4-225ENST00000497203 FAM32AQ9Y421 112 aaKnown RBP1.32□□□□□ -2.2
SMC4-225ENST00000497203 SNURFQ9Y675 71 aa1.32□□□□□ -2.2
SMC4-225ENST00000497203 CYB5BO43169 146 aa1.31□□□□□ -2.2
SMC4-225ENST00000497203 ASAH2BP0C7U1 165 aa1.31□□□□□ -2.2
SMC4-225ENST00000497203 LYNX1P0DP58 116 aa1.31□□□□□ -2.2
SMC4-225ENST00000497203 BRS3P32247 399 aa1.31□□□□□ -2.2
SMC4-225ENST00000497203 SURF2Q15527 256 aaPredicted RBP1.31□□□□□ -2.2
SMC4-225ENST00000497203 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.31□□□□□ -2.2
SMC4-225ENST00000497203 LINC00311Q8N616 119 aa1.31□□□□□ -2.2
SMC4-225ENST00000497203 OR8D4Q8NGM9 314 aa1.31□□□□□ -2.2
SMC4-225ENST00000497203 OR13D1Q8NGV5 346 aa1.31□□□□□ -2.2
SMC4-225ENST00000497203 OR4C6Q8NH72 309 aa1.31□□□□□ -2.2
SMC4-225ENST00000497203 HIST1H2BLQ99880 126 aa1.31□□□□□ -2.2
SMC4-225ENST00000497203 RETNLBQ9BQ08 111 aa1.31□□□□□ -2.2
SMC4-225ENST00000497203 ENY2Q9NPA8 101 aa1.31□□□□□ -2.2
SMC4-225ENST00000497203 ARL5AQ9Y689 179 aa1.31□□□□□ -2.2
SMC4-225ENST00000497203 ADGRL3Q9HAR2 1447 aa1.31□□□□□ -2.2
SMC4-225ENST00000497203 DIDO1Q9BTC0 2240 aaKnown RBP1.3□□□□□ -2.2
SMC4-225ENST00000497203 FAM159BA6NKW6 160 aa1.3□□□□□ -2.2
SMC4-225ENST00000497203 OR2T1O43869 369 aa1.3□□□□□ -2.2
SMC4-225ENST00000497203 PROSCO94903 275 aa1.3□□□□□ -2.2
SMC4-225ENST00000497203 RNASE3P12724 160 aaKnown RBP1.3□□□□□ -2.2
SMC4-225ENST00000497203 CAPZBP47756 277 aa1.3□□□□□ -2.2
SMC4-225ENST00000497203 ARF6P62330 175 aa1.3□□□□□ -2.2
SMC4-225ENST00000497203 RHOBP62745 196 aa1.3□□□□□ -2.2
SMC4-225ENST00000497203 TSNQ15631 228 aaKnown RBP1.3□□□□□ -2.2
SMC4-225ENST00000497203 C15orf53Q8NAA6 179 aa1.3□□□□□ -2.2
SMC4-225ENST00000497203 OR10X1Q8NGY0 326 aa1.3□□□□□ -2.2
SMC4-225ENST00000497203 DGCR14Q96DF8 476 aaKnown RBP1.3□□□□□ -2.2
SMC4-225ENST00000497203 PHB2Q99623 299 aa1.3□□□□□ -2.2
SMC4-225ENST00000497203 OPTCQ9UBM4 332 aa1.3□□□□□ -2.2
SMC4-225ENST00000497203 HS3ST2Q9Y278 367 aa1.3□□□□□ -2.2
SMC4-225ENST00000497203 FMN1Q68DA7 1419 aa1.3□□□□□ -2.2
SMC4-225ENST00000497203 MED1Q15648 1581 aaPredicted RBP1.3□□□□□ -2.2
SMC4-225ENST00000497203 DENND4CQ5VZ89 1909 aa1.29□□□□□ -2.2
SMC4-225ENST00000497203 TRBV19A0A075B6N1 114 aa1.29□□□□□ -2.2
SMC4-225ENST00000497203 TRAV1-1A0A0B4J248 108 aa1.29□□□□□ -2.2
SMC4-225ENST00000497203 C1orf196B1AJZ1 125 aa1.29□□□□□ -2.2
SMC4-225ENST00000497203 SULT1B1O43704 296 aa1.29□□□□□ -2.2
SMC4-225ENST00000497203 OR1I1O60431 355 aa1.29□□□□□ -2.2
SMC4-225ENST00000497203 UBL3O95164 117 aa1.29□□□□□ -2.2
SMC4-225ENST00000497203 EIF5AP63241 154 aaKnown RBP1.29□□□□□ -2.2
SMC4-225ENST00000497203 RHOGP84095 191 aa1.29□□□□□ -2.2
SMC4-225ENST00000497203 C9orf16Q9BUW7 83 aa1.29□□□□□ -2.2
SMC4-225ENST00000497203 PCF11O94913 1555 aaKnown RBP1.29□□□□□ -2.2
SMC4-225ENST00000497203 SBF1O95248 1867 aa1.29□□□□□ -2.2
SMC4-225ENST00000497203 TRAV4A0A0B4J268 109 aa1.28□□□□□ -2.2
SMC4-225ENST00000497203 C2orf70A6NJV1 201 aa1.28□□□□□ -2.2
SMC4-225ENST00000497203 HCRTO43612 131 aa1.28□□□□□ -2.2
SMC4-225ENST00000497203 IFNA7P01567 189 aa1.28□□□□□ -2.2
SMC4-225ENST00000497203 MGST1P10620 155 aaKnown RBP1.28□□□□□ -2.2
SMC4-225ENST00000497203 SRP14P37108 136 aaKnown RBP1.28□□□□□ -2.2
SMC4-225ENST00000497203 PIGPP57054 158 aa1.28□□□□□ -2.2
SMC4-225ENST00000497203 RAB4BP61018 213 aa1.28□□□□□ -2.2
SMC4-225ENST00000497203 PDE6HQ13956 83 aa1.28□□□□□ -2.2
SMC4-225ENST00000497203 GOLT1AQ6ZVE7 132 aa1.28□□□□□ -2.2
SMC4-225ENST00000497203 OR2T10Q8NGZ9 312 aa1.28□□□□□ -2.2
SMC4-225ENST00000497203 OR10J5Q8NHC4 309 aa1.28□□□□□ -2.2
SMC4-225ENST00000497203 TEX47Q8TBZ9 253 aa1.28□□□□□ -2.2
SMC4-225ENST00000497203 WFDC5Q8TCV5 224 aa1.28□□□□□ -2.2
SMC4-225ENST00000497203 ADAT3Q96EY9 351 aaPredicted RBP1.28□□□□□ -2.2
SMC4-225ENST00000497203 CEP19Q96LK0 163 aa1.28□□□□□ -2.2
SMC4-225ENST00000497203 IMUPQ9GZP8 106 aa1.28□□□□□ -2.2
SMC4-225ENST00000497203 PSTPIP2Q9H939 334 aa1.28□□□□□ -2.2
SMC4-225ENST00000497203 ARMC1Q9NVT9 282 aa1.28□□□□□ -2.2
SMC4-225ENST00000497203 UTP11Q9Y3A2 253 aaKnown RBP1.28□□□□□ -2.2
SMC4-225ENST00000497203 HMGB3O15347 200 aaKnown RBP1.27□□□□□ -2.21
SMC4-225ENST00000497203 HYPMO75409 117 aa1.27□□□□□ -2.21
SMC4-225ENST00000497203 CYBAP13498 195 aa1.27□□□□□ -2.21
SMC4-225ENST00000497203 SSR2P43308 183 aa1.27□□□□□ -2.21
SMC4-225ENST00000497203 DEFA3P59666 94 aa1.27□□□□□ -2.21
SMC4-225ENST00000497203 HSPE1P61604 102 aaKnown RBP1.27□□□□□ -2.21
SMC4-225ENST00000497203 BASP1P80723 227 aaKnown RBP1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms