RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 POU2AF1Q16633 256 aa10.56□□□□□ -0.72
VEGFA-215ENST00000497139 CCDC144NLQ6NUI1 221 aa10.56□□□□□ -0.72
VEGFA-215ENST00000497139 RPRMLQ8N4K4 120 aa10.56□□□□□ -0.72
VEGFA-215ENST00000497139 GCSAMQ8N6F7 178 aa10.56□□□□□ -0.72
VEGFA-215ENST00000497139 PIFOQ8TCI5 191 aa10.56□□□□□ -0.72
VEGFA-215ENST00000497139 DDB2Q92466 427 aa10.56□□□□□ -0.72
VEGFA-215ENST00000497139 PAXXQ9BUH6 204 aa10.56□□□□□ -0.72
VEGFA-215ENST00000497139 PRNDQ9UKY0 176 aa10.56□□□□□ -0.72
VEGFA-215ENST00000497139 HILPDAQ9Y5L2 63 aa10.56□□□□□ -0.72
VEGFA-215ENST00000497139 IGKV1OR2-108A0A075B7D4 117 aa10.55□□□□□ -0.72
VEGFA-215ENST00000497139 A0A1B0GW15 77 aa10.55□□□□□ -0.72
VEGFA-215ENST00000497139 SNAI2O43623 268 aa10.55□□□□□ -0.72
VEGFA-215ENST00000497139 CER1O95813 267 aa10.55□□□□□ -0.72
VEGFA-215ENST00000497139 OR13A1Q8NGR1 328 aa10.55□□□□□ -0.72
VEGFA-215ENST00000497139 GTSF1Q8WW33 167 aa10.55□□□□□ -0.72
VEGFA-215ENST00000497139 HIGD1BQ9P298 99 aa10.55□□□□□ -0.72
VEGFA-215ENST00000497139 R4GN57 208 aa10.55□□□□□ -0.72
VEGFA-215ENST00000497139 KNL1Q8NG31 2342 aa10.55□□□□□ -0.72
VEGFA-215ENST00000497139 IGHV3-43A0A0B4J1X8 118 aa10.55□□□□□ -0.72
VEGFA-215ENST00000497139 MT-CO3P00414 261 aa10.55□□□□□ -0.72
VEGFA-215ENST00000497139 IGHV3-43DP0DP04 118 aa10.55□□□□□ -0.72
VEGFA-215ENST00000497139 COX6A1P12074 109 aa10.55□□□□□ -0.72
VEGFA-215ENST00000497139 SPINK2P20155 84 aa10.55□□□□□ -0.72
VEGFA-215ENST00000497139 KIR2DL2P43627 348 aaPredicted RBP10.55□□□□□ -0.72
VEGFA-215ENST00000497139 CFAP161Q6P656 301 aa10.55□□□□□ -0.72
VEGFA-215ENST00000497139 TDHQ8IZJ6 230 aa10.55□□□□□ -0.72
VEGFA-215ENST00000497139 VKORC1L1Q8N0U8 176 aa10.55□□□□□ -0.72
VEGFA-215ENST00000497139 CACNG8Q8WXS5 425 aa10.55□□□□□ -0.72
VEGFA-215ENST00000497139 FMC1Q96HJ9 113 aa10.55□□□□□ -0.72
VEGFA-215ENST00000497139 SPANXB1Q9NS25 103 aaPredicted RBP10.55□□□□□ -0.72
VEGFA-215ENST00000497139 USP34Q70CQ2 3546 aa10.55□□□□□ -0.72
VEGFA-215ENST00000497139 AGFG2O95081 481 aa10.54□□□□□ -0.72
VEGFA-215ENST00000497139 COL8A2P25067 703 aa10.54□□□□□ -0.72
VEGFA-215ENST00000497139 CEBPDP49716 269 aaPredicted RBP10.54□□□□□ -0.72
VEGFA-215ENST00000497139 DHRS13Q6UX07 377 aa10.54□□□□□ -0.72
VEGFA-215ENST00000497139 FAM90A1Q86YD7 464 aa10.54□□□□□ -0.72
VEGFA-215ENST00000497139 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.54□□□□□ -0.72
VEGFA-215ENST00000497139 STXBP6Q8NFX7 210 aa10.54□□□□□ -0.72
VEGFA-215ENST00000497139 OR1L8Q8NGR8 309 aa10.54□□□□□ -0.72
VEGFA-215ENST00000497139 NANOS1Q8WY41 292 aaKnown RBP10.54□□□□□ -0.72
VEGFA-215ENST00000497139 RAB37Q96AX2 223 aa10.54□□□□□ -0.72
VEGFA-215ENST00000497139 PLPPR2Q96GM1 343 aa10.54□□□□□ -0.72
VEGFA-215ENST00000497139 EPDR1Q9UM22 224 aa10.54□□□□□ -0.72
VEGFA-215ENST00000497139 UNC13CQ8NB66 2214 aa10.54□□□□□ -0.72
VEGFA-215ENST00000497139 NPIPB6E9PJ23 425 aa10.54□□□□□ -0.72
VEGFA-215ENST00000497139 CRYBA4P53673 196 aa10.54□□□□□ -0.72
VEGFA-215ENST00000497139 PRCDQ00LT1 54 aa10.54□□□□□ -0.72
VEGFA-215ENST00000497139 PGLYRP4Q96LB8 373 aa10.54□□□□□ -0.72
VEGFA-215ENST00000497139 MCRIP2Q9BUT9 160 aaKnown RBP10.54□□□□□ -0.72
VEGFA-215ENST00000497139 TRAV26-1A0A087WT03 109 aa10.53□□□□□ -0.72
VEGFA-215ENST00000497139 DEFB108AA8MXU0 73 aa10.53□□□□□ -0.72
VEGFA-215ENST00000497139 ZNHIT1O43257 154 aa10.53□□□□□ -0.72
VEGFA-215ENST00000497139 APOHP02749 345 aaPredicted RBP10.53□□□□□ -0.72
VEGFA-215ENST00000497139 NAA38Q9BRA0 125 aaKnown RBP10.53□□□□□ -0.72
VEGFA-215ENST00000497139 KLF7O75840 302 aaPredicted RBP10.53□□□□□ -0.72
VEGFA-215ENST00000497139 LTAP01374 205 aa10.53□□□□□ -0.72
VEGFA-215ENST00000497139 ACP7Q6ZNF0 438 aa10.53□□□□□ -0.72
VEGFA-215ENST00000497139 ZNF788Q6ZQV5 615 aa10.53□□□□□ -0.72
VEGFA-215ENST00000497139 DAZAP1Q96EP5 407 aaKnown RBP10.53□□□□□ -0.72
VEGFA-215ENST00000497139 IQCF6A8MYZ5 107 aa10.52□□□□□ -0.72
VEGFA-215ENST00000497139 K7EQM0 130 aa10.52□□□□□ -0.72
VEGFA-215ENST00000497139 COX7A2P2O60397 106 aa10.52□□□□□ -0.72
VEGFA-215ENST00000497139 NCR2O95944 276 aa10.52□□□□□ -0.72
VEGFA-215ENST00000497139 CD69Q07108 199 aa10.52□□□□□ -0.72
VEGFA-215ENST00000497139 OR5AN1Q8NGI8 311 aa10.52□□□□□ -0.72
VEGFA-215ENST00000497139 TMEM190Q8WZ59 177 aa10.52□□□□□ -0.72
VEGFA-215ENST00000497139 IFI27L2Q9H2X8 130 aa10.52□□□□□ -0.72
VEGFA-215ENST00000497139 GNG12Q9UBI6 72 aa10.52□□□□□ -0.72
VEGFA-215ENST00000497139 COLQQ9Y215 455 aaPredicted RBP10.52□□□□□ -0.72
VEGFA-215ENST00000497139 INSIG2Q9Y5U4 225 aa10.52□□□□□ -0.72
VEGFA-215ENST00000497139 MED12LQ86YW9 2145 aa10.52□□□□□ -0.73
VEGFA-215ENST00000497139 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.52□□□□□ -0.73
VEGFA-215ENST00000497139 C5orf64Q2M2E5 130 aa10.52□□□□□ -0.73
VEGFA-215ENST00000497139 TMEM177Q53S58 311 aa10.52□□□□□ -0.73
VEGFA-215ENST00000497139 SLC25A48Q6ZT89 311 aaKnown RBP10.52□□□□□ -0.73
VEGFA-215ENST00000497139 PPP1R32Q7Z5V6 425 aa10.52□□□□□ -0.73
VEGFA-215ENST00000497139 FXYD5Q96DB9 178 aa10.52□□□□□ -0.73
VEGFA-215ENST00000497139 ZNF576Q9H609 170 aa10.52□□□□□ -0.73
VEGFA-215ENST00000497139 MRPL16Q9NX20 251 aaKnown RBP10.52□□□□□ -0.73
VEGFA-215ENST00000497139 BOKQ9UMX3 212 aaPredicted RBP10.52□□□□□ -0.73
VEGFA-215ENST00000497139 C22orf46C9J442 243 aa10.51□□□□□ -0.73
VEGFA-215ENST00000497139 TBC1D28Q2M2D7 210 aa10.51□□□□□ -0.73
VEGFA-215ENST00000497139 CR1LQ2VPA4 569 aa10.51□□□□□ -0.73
VEGFA-215ENST00000497139 C10orf113Q5VZT2 155 aa10.51□□□□□ -0.73
VEGFA-215ENST00000497139 PDPNQ86YL7 162 aa10.51□□□□□ -0.73
VEGFA-215ENST00000497139 ZNF138P52744 262 aa10.51□□□□□ -0.73
VEGFA-215ENST00000497139 ASPHD1Q5U4P2 390 aa10.51□□□□□ -0.73
VEGFA-215ENST00000497139 RFESDQ8TAC1 157 aa10.51□□□□□ -0.73
VEGFA-215ENST00000497139 TRAV5A0A0B4J249 113 aa10.5□□□□□ -0.73
VEGFA-215ENST00000497139 SHISA9B4DS77 424 aa10.5□□□□□ -0.73
VEGFA-215ENST00000497139 DLL1O00548 723 aa10.5□□□□□ -0.73
VEGFA-215ENST00000497139 SLC25A5P05141 298 aaKnown RBP10.5□□□□□ -0.73
VEGFA-215ENST00000497139 GRPP07492 148 aa10.5□□□□□ -0.73
VEGFA-215ENST00000497139 RFPL3SP0C7P2 107 aa10.5□□□□□ -0.73
VEGFA-215ENST00000497139 CD24P25063 80 aa10.5□□□□□ -0.73
VEGFA-215ENST00000497139 FCGR2BP31994 310 aaPredicted RBP10.5□□□□□ -0.73
VEGFA-215ENST00000497139 FOXG1P55316 489 aaPredicted RBP10.5□□□□□ -0.73
VEGFA-215ENST00000497139 RIGQ13278 110 aa10.5□□□□□ -0.73
VEGFA-215ENST00000497139 TUSC5Q8IXB3 177 aa10.5□□□□□ -0.73
VEGFA-215ENST00000497139 DEFB119Q8N690 84 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms