RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 ZNF709Q8N972 641 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 LFNGQ8NES3 379 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 ABHD14BQ96IU4 210 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 TMEM204Q9BSN7 226 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 HES4Q9HCC6 221 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 COMMD9Q9P000 198 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 LSM5Q9Y4Y9 91 aaKnown RBP5.04□□□□□ -1.6
SSBP1-213ENST00000496622 DSCAMO60469 2012 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 MALRD1Q5VYJ5 2156 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 USP9YO00507 2555 aaPredicted RBP5.04□□□□□ -1.6
SSBP1-213ENST00000496622 IGLV3-9A0A075B6K5 115 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 A0A0G2JRQ6 117 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 C3orf85A0A1B0GTC6 90 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 FAM90A10PA6NDY2 464 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 FAM90A18PA6NE21 464 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 FAM90A16PA6NEW6 464 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 FAM90A20PA6NIJ5 464 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 FAM90A8PA6NJQ4 464 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 FAM90A7PA6NKC0 464 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 FAM90A22PA8MWA6 464 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 FAM90A12PA8MX19 464 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 FAM90A5PA8MXJ8 464 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 FAM90A23PA8MXZ1 464 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 MPPED1O15442 326 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 CD8AP01732 235 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 GYPAP02724 150 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 FAM90A15PP0C7V4 464 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 FAM90A13PP0C7W8 464 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 FAM90A14PP0C7W9 464 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 FAM90A24PP0C7X0 464 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 FAM157CP0CG43 387 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 LMO1P25800 156 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 DLX1P56177 255 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 TAS2R31P59538 309 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 ADORA2A-AS1P86434 159 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 TNFAIP6P98066 277 aaPredicted RBP5.04□□□□□ -1.6
SSBP1-213ENST00000496622 TMEM187Q14656 261 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 PNKDQ8N490 385 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 OR4A16Q8NH70 328 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 FAM110DQ8TAY7 271 aaPredicted RBP5.04□□□□□ -1.6
SSBP1-213ENST00000496622 CCL13Q99616 98 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 VKORC1Q9BQB6 163 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 NAA60Q9H7X0 242 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 KCNS2Q9ULS6 477 aa5.04□□□□□ -1.6
SSBP1-213ENST00000496622 TRBV6-7A0A0A0MS04 114 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 A0A0B4J2A0 478 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 A0A0G2JLM5 398 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 KIR2DS1A0A191URI9 304 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 CLDN34H7C241 214 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 HYPMO75409 117 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 HBZP02008 142 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 KIR2DS4P43632 304 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 HLA-DRB3P79483 266 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 IL13RA2Q14627 380 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 KIR2DS1Q14954 304 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 LRRC75BQ2VPJ9 315 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 OR4X1Q8NH49 305 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 OR4A5Q8NH83 315 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 TMED6Q8WW62 240 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 BAALCQ8WXS3 180 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 MS4A10Q96PG2 267 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 FAM234AQ9H0X4 552 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 SRD5A3Q9H8P0 318 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 SHPKQ9UHJ6 478 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 CDC42EP3Q9UKI2 254 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 FUT9Q9Y231 359 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 OR2W1Q9Y3N9 320 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 WIPI2Q9Y4P8 454 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 F8P00451 2351 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 WNK2Q9Y3S1 2297 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 IGLC7A0M8Q6 106 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 FABP5P3A8MUU1 101 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 SRRM5B3KS81 715 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 SHISA9B4DS77 424 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 E7EQL1 145 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 ZG16O60844 167 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 ZNF737O75373 536 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 PGLYRP1O75594 196 aaPredicted RBP5.03□□□□□ -1.6
SSBP1-213ENST00000496622 NTF3P20783 257 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 MDH2P40926 338 aaKnown RBP5.03□□□□□ -1.6
SSBP1-213ENST00000496622 CA7P43166 264 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 RHOBP62745 196 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 ZNF345Q14585 488 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 FAM162BQ5T6X4 162 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 Q8IYB0 196 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 VN1R17PQ8TDU5 208 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 ZC2HC1AQ96GY0 325 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 SCGB3A2Q96PL1 93 aa5.03□□□□□ -1.6
SSBP1-213ENST00000496622 MRPS16Q9Y3D3 137 aaKnown RBP5.03□□□□□ -1.6
SSBP1-213ENST00000496622 GAGE10A6NGK3 116 aa5.02□□□□□ -1.61
SSBP1-213ENST00000496622 NBR2O15453 112 aa5.02□□□□□ -1.61
SSBP1-213ENST00000496622 YPEL1O60688 119 aa5.02□□□□□ -1.61
SSBP1-213ENST00000496622 FCN3O75636 299 aa5.02□□□□□ -1.61
SSBP1-213ENST00000496622 ORM1P02763 201 aa5.02□□□□□ -1.61
SSBP1-213ENST00000496622 RPL7P18124 248 aaKnown RBP5.02□□□□□ -1.61
SSBP1-213ENST00000496622 MDKP21741 143 aaPredicted RBP5.02□□□□□ -1.61
SSBP1-213ENST00000496622 NPY1RP25929 384 aa5.02□□□□□ -1.61
SSBP1-213ENST00000496622 ZNF134P52741 427 aa5.02□□□□□ -1.61
SSBP1-213ENST00000496622 RPL24P83731 157 aaKnown RBP5.02□□□□□ -1.61
SSBP1-213ENST00000496622 TLE1Q04724 770 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms