RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 K7EQG2 157 aa9.47□□□□□ -0.89
FN1-226ENST00000496542 ZNF688P0C7X2 276 aa9.47□□□□□ -0.89
FN1-226ENST00000496542 TMEM187Q14656 261 aa9.47□□□□□ -0.89
FN1-226ENST00000496542 C2orf83Q53S99 150 aa9.47□□□□□ -0.89
FN1-226ENST00000496542 PRSS54Q6PEW0 395 aa9.47□□□□□ -0.89
FN1-226ENST00000496542 SLC24A4Q8NFF2 622 aa9.47□□□□□ -0.89
FN1-226ENST00000496542 OR51S1Q8NGJ8 323 aa9.47□□□□□ -0.89
FN1-226ENST00000496542 OR1S2Q8NGQ3 325 aa9.47□□□□□ -0.89
FN1-226ENST00000496542 C11orf45Q8TAV5 145 aa9.47□□□□□ -0.89
FN1-226ENST00000496542 GRAMD2BQ96HH9 432 aa9.47□□□□□ -0.89
FN1-226ENST00000496542 PRRT1Q99946 306 aa9.47□□□□□ -0.89
FN1-226ENST00000496542 PRR13Q9NZ81 148 aa9.47□□□□□ -0.89
FN1-226ENST00000496542 CCDC59Q9P031 241 aaKnown RBP9.47□□□□□ -0.89
FN1-226ENST00000496542 GPR132Q9UNW8 380 aa9.47□□□□□ -0.89
FN1-226ENST00000496542 FRAS1Q86XX4 4008 aa9.47□□□□□ -0.89
FN1-226ENST00000496542 KNCNA6PVL3 124 aa9.46□□□□□ -0.9
FN1-226ENST00000496542 CTDSPLO15194 276 aa9.46□□□□□ -0.9
FN1-226ENST00000496542 IGLC1P0CG04 106 aa9.46□□□□□ -0.9
FN1-226ENST00000496542 SLC25A4P12235 298 aa9.46□□□□□ -0.9
FN1-226ENST00000496542 OR10J1P30954 320 aa9.46□□□□□ -0.9
FN1-226ENST00000496542 RBMS2Q15434 407 aaKnown RBP9.46□□□□□ -0.9
FN1-226ENST00000496542 RAB2BQ8WUD1 216 aa9.46□□□□□ -0.9
FN1-226ENST00000496542 MFFQ9GZY8 342 aa9.46□□□□□ -0.9
FN1-226ENST00000496542 HNRNPCP07910 306 aaKnown RBP eCLIP9.45□□□□□ -0.93e-6■■□□□ 12.7
FN1-226ENST00000496542 SULT1A3P0DMM9 295 aa9.45□□□□□ -0.9
FN1-226ENST00000496542 SULT1A4P0DMN0 295 aa9.45□□□□□ -0.9
FN1-226ENST00000496542 NPY1RP25929 384 aa9.45□□□□□ -0.9
FN1-226ENST00000496542 DHRS2Q13268 280 aa9.45□□□□□ -0.9
FN1-226ENST00000496542 TRPT1Q86TN4 253 aaKnown RBP9.45□□□□□ -0.9
FN1-226ENST00000496542 DYNC2LI1Q8TCX1 351 aa9.45□□□□□ -0.9
FN1-226ENST00000496542 RNASEH2CQ8TDP1 164 aaKnown RBP9.45□□□□□ -0.9
FN1-226ENST00000496542 Q8WTZ3 238 aa9.45□□□□□ -0.9
FN1-226ENST00000496542 TMEM170AQ8WVE7 144 aa9.45□□□□□ -0.9
FN1-226ENST00000496542 ACY3Q96HD9 319 aa9.45□□□□□ -0.9
FN1-226ENST00000496542 MCUBQ9NWR8 336 aa9.45□□□□□ -0.9
FN1-226ENST00000496542 RABL2AQ9UBK7 228 aaPredicted RBP9.45□□□□□ -0.9
FN1-226ENST00000496542 RABL2BQ9UNT1 228 aa9.45□□□□□ -0.9
FN1-226ENST00000496542 TMEM56-RWDD3S4R434 201 aa9.45□□□□□ -0.9
FN1-226ENST00000496542 ANKRD20A5PA0PJZ0 165 aa9.44□□□□□ -0.9
FN1-226ENST00000496542 HELTA6NFD8 242 aa9.44□□□□□ -0.9
FN1-226ENST00000496542 IFNA4P05014 189 aa9.44□□□□□ -0.9
FN1-226ENST00000496542 IL4P05112 153 aa9.44□□□□□ -0.9
FN1-226ENST00000496542 GIG44P09565 113 aaPredicted RBP9.44□□□□□ -0.9
FN1-226ENST00000496542 C4BPBP20851 252 aa9.44□□□□□ -0.9
FN1-226ENST00000496542 EIF2B2P49770 351 aaKnown RBP9.44□□□□□ -0.9
FN1-226ENST00000496542 YPEL3P61236 119 aaPredicted RBP9.44□□□□□ -0.9
FN1-226ENST00000496542 ACTL10Q5JWF8 245 aa9.44□□□□□ -0.9
FN1-226ENST00000496542 ETFRF1Q6IPR1 90 aa9.44□□□□□ -0.9
FN1-226ENST00000496542 RPP25LQ8N5L8 163 aaKnown RBP9.44□□□□□ -0.9
FN1-226ENST00000496542 DCANP1Q8TF63 244 aa9.44□□□□□ -0.9
FN1-226ENST00000496542 NPIPB3Q92617 1050 aa9.44□□□□□ -0.9
FN1-226ENST00000496542 IL22RA2Q969J5 263 aa9.44□□□□□ -0.9
FN1-226ENST00000496542 SCP2D1Q9UJQ7 156 aa9.44□□□□□ -0.9
FN1-226ENST00000496542 KCNIP3Q9Y2W7 256 aa9.44□□□□□ -0.9
FN1-226ENST00000496542 GSTZ1O43708 216 aaPredicted RBP9.43□□□□□ -0.9
FN1-226ENST00000496542 NOL3O60936 208 aaKnown RBP9.43□□□□□ -0.9
FN1-226ENST00000496542 DEDDO75618 318 aa9.43□□□□□ -0.9
FN1-226ENST00000496542 IFNA10P01566 189 aa9.43□□□□□ -0.9
FN1-226ENST00000496542 SPP1P10451 314 aa9.43□□□□□ -0.9
FN1-226ENST00000496542 AKR1C4P17516 323 aa9.43□□□□□ -0.9
FN1-226ENST00000496542 TMBIM6P55061 237 aa9.43□□□□□ -0.9
FN1-226ENST00000496542 USF2Q15853 346 aaPredicted RBP9.43□□□□□ -0.9
FN1-226ENST00000496542 NMSQ5H8A3 153 aa9.43□□□□□ -0.9
FN1-226ENST00000496542 PSMG4Q5JS54 123 aa9.43□□□□□ -0.9
FN1-226ENST00000496542 MORN3Q6PF18 240 aaPredicted RBP9.43□□□□□ -0.9
FN1-226ENST00000496542 C16orf54Q6UWD8 224 aa9.43□□□□□ -0.9
FN1-226ENST00000496542 NOXA1Q86UR1 476 aa9.43□□□□□ -0.9
FN1-226ENST00000496542 GLMPQ8WWB7 406 aa9.43□□□□□ -0.9
FN1-226ENST00000496542 CACFD1Q9UGQ2 172 aa9.43□□□□□ -0.9
FN1-226ENST00000496542 RSL24D1Q9UHA3 163 aaKnown RBP9.43□□□□□ -0.9
FN1-226ENST00000496542 U3KQE9 123 aa9.43□□□□□ -0.9
FN1-226ENST00000496542 IGHV4-28A0A0C4DH34 117 aa9.42□□□□□ -0.9
FN1-226ENST00000496542 RD3LP0DJH9 198 aa9.42□□□□□ -0.9
FN1-226ENST00000496542 SMCO1Q147U7 214 aa9.42□□□□□ -0.9
FN1-226ENST00000496542 TMEM41BQ5BJD5 291 aa9.42□□□□□ -0.9
FN1-226ENST00000496542 LGALS9CQ6DKI2 356 aa9.42□□□□□ -0.9
FN1-226ENST00000496542 LYZL2Q7Z4W2 148 aa9.42□□□□□ -0.9
FN1-226ENST00000496542 Q8NAQ8 132 aa9.42□□□□□ -0.9
FN1-226ENST00000496542 DTD1Q8TEA8 209 aa9.42□□□□□ -0.9
FN1-226ENST00000496542 SCGB3A2Q96PL1 93 aa9.42□□□□□ -0.9
FN1-226ENST00000496542 BCL7BQ9BQE9 202 aa9.42□□□□□ -0.9
FN1-226ENST00000496542 RBKSQ9H477 322 aa9.42□□□□□ -0.9
FN1-226ENST00000496542 CLEC5AQ9NY25 188 aa9.42□□□□□ -0.9
FN1-226ENST00000496542 DNAH10Q8IVF4 4471 aa9.42□□□□□ -0.9
FN1-226ENST00000496542 VPS13DQ5THJ4 4388 aa9.42□□□□□ -0.9
FN1-226ENST00000496542 A0A0B4J2A0 478 aa9.41□□□□□ -0.9
FN1-226ENST00000496542 TOMM40O96008 361 aa9.41□□□□□ -0.9
FN1-226ENST00000496542 CCR6P51684 374 aa9.41□□□□□ -0.9
FN1-226ENST00000496542 AP2S1P53680 142 aaPredicted RBP9.41□□□□□ -0.9
FN1-226ENST00000496542 SUPT4H1P63272 117 aaKnown RBP9.41□□□□□ -0.9
FN1-226ENST00000496542 LGI3Q8N145 548 aa9.41□□□□□ -0.9
FN1-226ENST00000496542 C2CD4CQ8TF44 421 aa9.41□□□□□ -0.9
FN1-226ENST00000496542 RAB40CQ96S21 281 aa9.41□□□□□ -0.9
FN1-226ENST00000496542 SLIRPQ9GZT3 109 aaKnown RBP9.41□□□□□ -0.9
FN1-226ENST00000496542 HSPB7Q9UBY9 170 aa9.41□□□□□ -0.9
FN1-226ENST00000496542 SHPKQ9UHJ6 478 aa9.41□□□□□ -0.9
FN1-226ENST00000496542 U3KQ87 197 aa9.41□□□□□ -0.9
FN1-226ENST00000496542 DNAH6Q9C0G6 4158 aa9.41□□□□□ -0.9
FN1-226ENST00000496542 FABP12A6NFH5 140 aa9.4□□□□□ -0.9
FN1-226ENST00000496542 FAM90A26D6RGX4 464 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms