RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 EIF3IQ13347 325 aaKnown RBP1.92□□□□□ -2.1
CLK1-214ENST00000496205 C1orf140Q5VVS0 124 aa1.92□□□□□ -2.1
CLK1-214ENST00000496205 C22orf39Q6P5X5 142 aa1.92□□□□□ -2.1
CLK1-214ENST00000496205 LHFPL1Q86WI0 220 aa1.92□□□□□ -2.1
CLK1-214ENST00000496205 OR8D4Q8NGM9 314 aa1.92□□□□□ -2.1
CLK1-214ENST00000496205 PPTC7Q8NI37 304 aa1.92□□□□□ -2.1
CLK1-214ENST00000496205 DNAJC9Q8WXX5 260 aa1.92□□□□□ -2.1
CLK1-214ENST00000496205 OR8B2Q96RD0 313 aa1.92□□□□□ -2.1
CLK1-214ENST00000496205 PFDN5Q99471 154 aa1.92□□□□□ -2.1
CLK1-214ENST00000496205 HIST1H2BLQ99880 126 aa1.92□□□□□ -2.1
CLK1-214ENST00000496205 SLC25A21Q9BQT8 299 aaPredicted RBP1.92□□□□□ -2.1
CLK1-214ENST00000496205 TTTY13Q9BZ97 58 aa1.92□□□□□ -2.1
CLK1-214ENST00000496205 YIPF3Q9GZM5 350 aa1.92□□□□□ -2.1
CLK1-214ENST00000496205 OR8D2Q9GZM6 311 aa1.92□□□□□ -2.1
CLK1-214ENST00000496205 TCEAL2Q9H3H9 227 aaPredicted RBP1.92□□□□□ -2.1
CLK1-214ENST00000496205 C16orf95Q9H693 158 aa1.92□□□□□ -2.1
CLK1-214ENST00000496205 TPT1P8Q9HAU6 139 aa1.92□□□□□ -2.1
CLK1-214ENST00000496205 OSTCQ9NRP0 149 aa1.92□□□□□ -2.1
CLK1-214ENST00000496205 COPZ2Q9P299 210 aa1.92□□□□□ -2.1
CLK1-214ENST00000496205 TIMM9Q9Y5J7 89 aa1.92□□□□□ -2.1
CLK1-214ENST00000496205 MED23Q9ULK4 1368 aa1.92□□□□□ -2.1
CLK1-214ENST00000496205 WDR7Q9Y4E6 1490 aa1.92□□□□□ -2.1
CLK1-214ENST00000496205 TECPR2O15040 1411 aa1.91□□□□□ -2.1
CLK1-214ENST00000496205 CD109Q6YHK3 1445 aa1.91□□□□□ -2.1
CLK1-214ENST00000496205 A0A0D9SEW6 157 aa1.91□□□□□ -2.1
CLK1-214ENST00000496205 A0A0D9SG52 128 aa1.91□□□□□ -2.1
CLK1-214ENST00000496205 C7orf71A4D174 169 aa1.91□□□□□ -2.1
CLK1-214ENST00000496205 ZNF860A6NHJ4 632 aa1.91□□□□□ -2.1
CLK1-214ENST00000496205 M0R378 163 aa1.91□□□□□ -2.1
CLK1-214ENST00000496205 OVOL1O14753 267 aa1.91□□□□□ -2.1
CLK1-214ENST00000496205 ZNF728P0DKX0 622 aa1.91□□□□□ -2.1
CLK1-214ENST00000496205 COX6A1P12074 109 aa1.91□□□□□ -2.1
CLK1-214ENST00000496205 LGALS3P17931 250 aaKnown RBP1.91□□□□□ -2.1
CLK1-214ENST00000496205 FUSP35637 526 aaKnown RBP eCLIP1.91□□□□□ -2.1
CLK1-214ENST00000496205 FXYD2P54710 66 aa1.91□□□□□ -2.1
CLK1-214ENST00000496205 CKS1BP61024 79 aa1.91□□□□□ -2.1
CLK1-214ENST00000496205 MYL5Q02045 173 aa1.91□□□□□ -2.1
CLK1-214ENST00000496205 OR8B8Q15620 311 aa1.91□□□□□ -2.1
CLK1-214ENST00000496205 MORN2Q502X0 79 aa1.91□□□□□ -2.1
CLK1-214ENST00000496205 LRRC28Q86X40 367 aaPredicted RBP1.91□□□□□ -2.1
CLK1-214ENST00000496205 RPP25LQ8N5L8 163 aaKnown RBP1.91□□□□□ -2.1
CLK1-214ENST00000496205 TMEM229BQ8NBD8 167 aa1.91□□□□□ -2.1
CLK1-214ENST00000496205 PFN4Q8NHR9 129 aa1.91□□□□□ -2.1
CLK1-214ENST00000496205 BORCS8Q96FH0 119 aa1.91□□□□□ -2.1
CLK1-214ENST00000496205 NHP2Q9NX24 153 aaKnown RBP1.91□□□□□ -2.1
CLK1-214ENST00000496205 MAST2Q6P0Q8 1798 aa1.9□□□□□ -2.1
CLK1-214ENST00000496205 MED1Q15648 1581 aaPredicted RBP1.9□□□□□ -2.1
CLK1-214ENST00000496205 C1orf196B1AJZ1 125 aa1.9□□□□□ -2.11
CLK1-214ENST00000496205 GNRH2O43555 120 aa1.9□□□□□ -2.11
CLK1-214ENST00000496205 SULT1C4O75897 302 aa1.9□□□□□ -2.11
CLK1-214ENST00000496205 CST7O76096 145 aa1.9□□□□□ -2.11
CLK1-214ENST00000496205 CPSF4O95639 269 aaKnown RBP1.9□□□□□ -2.11
CLK1-214ENST00000496205 P0DMU3 169 aa1.9□□□□□ -2.11
CLK1-214ENST00000496205 FAM231AP0DMU4 169 aa1.9□□□□□ -2.11
CLK1-214ENST00000496205 FAM231CP0DMU5 169 aa1.9□□□□□ -2.11
CLK1-214ENST00000496205 COX4I1P13073 169 aa1.9□□□□□ -2.11
CLK1-214ENST00000496205 RPL7P18124 248 aaKnown RBP1.9□□□□□ -2.11
CLK1-214ENST00000496205 RPS3P23396 243 aaKnown RBP eCLIP1.9□□□□□ -2.11
CLK1-214ENST00000496205 NDUFA6P56556 154 aa1.9□□□□□ -2.11
CLK1-214ENST00000496205 IGFBP7Q16270 282 aa1.9□□□□□ -2.11
CLK1-214ENST00000496205 FAM229BQ4G0N7 80 aa1.9□□□□□ -2.11
CLK1-214ENST00000496205 Q6ZS52 159 aa1.9□□□□□ -2.11
CLK1-214ENST00000496205 PHF5AQ7RTV0 110 aaKnown RBP1.9□□□□□ -2.11
CLK1-214ENST00000496205 LYPD6Q86Y78 171 aa1.9□□□□□ -2.11
CLK1-214ENST00000496205 OR8I2Q8N0Y5 310 aa1.9□□□□□ -2.11
CLK1-214ENST00000496205 SIGLECL1Q8N7X8 197 aa1.9□□□□□ -2.11
CLK1-214ENST00000496205 C1orf64Q8NEQ6 169 aa1.9□□□□□ -2.11
CLK1-214ENST00000496205 RNASE11Q8TAA1 199 aaKnown RBP1.9□□□□□ -2.11
CLK1-214ENST00000496205 CMTM2Q8TAZ6 248 aa1.9□□□□□ -2.11
CLK1-214ENST00000496205 C1orf54Q8WWF1 131 aa1.9□□□□□ -2.11
CLK1-214ENST00000496205 TMEM106AQ96A25 262 aa1.9□□□□□ -2.11
CLK1-214ENST00000496205 CGREF1Q99674 301 aa1.9□□□□□ -2.11
CLK1-214ENST00000496205 GINS4Q9BRT9 223 aa1.9□□□□□ -2.11
CLK1-214ENST00000496205 LXNQ9BS40 222 aa1.9□□□□□ -2.11
CLK1-214ENST00000496205 ZNF471Q9BX82 626 aaPredicted RBP1.9□□□□□ -2.11
CLK1-214ENST00000496205 OR2H1Q9GZK4 316 aa1.9□□□□□ -2.11
CLK1-214ENST00000496205 PSORS1C2Q9UIG4 136 aa1.9□□□□□ -2.11
CLK1-214ENST00000496205 TRPM3Q9HCF6 1732 aaPredicted RBP1.9□□□□□ -2.11
CLK1-214ENST00000496205 RIC1Q4ADV7 1423 aa1.9□□□□□ -2.11
CLK1-214ENST00000496205 TRAPPC8Q9Y2L5 1435 aa1.9□□□□□ -2.11
CLK1-214ENST00000496205 SHANK1Q9Y566 2161 aa1.89□□□□□ -2.11
CLK1-214ENST00000496205 ZNF106Q9H2Y7 1883 aaKnown RBP1.89□□□□□ -2.11
CLK1-214ENST00000496205 TRAV7A0A075B6U4 112 aa1.89□□□□□ -2.11
CLK1-214ENST00000496205 IGKV1-9A0A0C4DH69 117 aa1.89□□□□□ -2.11
CLK1-214ENST00000496205 TRBV7-6A0A0J9YX20 115 aa1.89□□□□□ -2.11
CLK1-214ENST00000496205 C3orf84H3BNL1 204 aa1.89□□□□□ -2.11
CLK1-214ENST00000496205 NDUFA2O43678 99 aa1.89□□□□□ -2.11
CLK1-214ENST00000496205 ZNF22P17026 224 aaPredicted RBP1.89□□□□□ -2.11
CLK1-214ENST00000496205 S100A11P31949 105 aa1.89□□□□□ -2.11
CLK1-214ENST00000496205 RPL28P46779 137 aaKnown RBP1.89□□□□□ -2.11
CLK1-214ENST00000496205 EVX1P49640 407 aa1.89□□□□□ -2.11
CLK1-214ENST00000496205 NDUFA5Q16718 116 aa1.89□□□□□ -2.11
CLK1-214ENST00000496205 KRTAP25-1Q3LHN0 102 aa1.89□□□□□ -2.11
CLK1-214ENST00000496205 DPPA3Q6W0C5 159 aa1.89□□□□□ -2.11
CLK1-214ENST00000496205 DEFB128Q7Z7B8 93 aa1.89□□□□□ -2.11
CLK1-214ENST00000496205 BPIFA4PQ86YQ2 179 aa1.89□□□□□ -2.11
CLK1-214ENST00000496205 MSRB3Q8IXL7 192 aa1.89□□□□□ -2.11
CLK1-214ENST00000496205 OR8J3Q8NGG0 315 aa1.89□□□□□ -2.11
CLK1-214ENST00000496205 OR4C16Q8NGL9 310 aa1.89□□□□□ -2.11
CLK1-214ENST00000496205 IMMP2LQ96T52 175 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms