RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 TMED3Q9Y3Q3 217 aa6.88□□□□□ -1.31
SMARCAL1-213ENST00000496037 NBDYA0A0U1RRE5 68 aa6.87□□□□□ -1.31
SMARCAL1-213ENST00000496037 C15orf61A6NNL5 157 aa6.87□□□□□ -1.31
SMARCAL1-213ENST00000496037 H0YIZ8 118 aa6.87□□□□□ -1.31
SMARCAL1-213ENST00000496037 CA11O75493 328 aa6.87□□□□□ -1.31
SMARCAL1-213ENST00000496037 ELLP55199 621 aaPredicted RBP6.87□□□□□ -1.31
SMARCAL1-213ENST00000496037 SNRPGP62308 76 aaKnown RBP6.87□□□□□ -1.31
SMARCAL1-213ENST00000496037 FCN2Q15485 313 aa6.87□□□□□ -1.31
SMARCAL1-213ENST00000496037 SPHARQ15513 63 aa6.87□□□□□ -1.31
SMARCAL1-213ENST00000496037 TNXAQ16473 311 aa6.87□□□□□ -1.31
SMARCAL1-213ENST00000496037 TP53I3Q53FA7 332 aa6.87□□□□□ -1.31
SMARCAL1-213ENST00000496037 HSD17B13Q7Z5P4 300 aaPredicted RBP6.87□□□□□ -1.31
SMARCAL1-213ENST00000496037 EIF4E3Q8N5X7 224 aaKnown RBP6.87□□□□□ -1.31
SMARCAL1-213ENST00000496037 SCARB1Q8WTV0 552 aa6.87□□□□□ -1.31
SMARCAL1-213ENST00000496037 IL1F10Q8WWZ1 152 aa6.87□□□□□ -1.31
SMARCAL1-213ENST00000496037 SRSF12Q8WXF0 261 aaKnown RBP6.87□□□□□ -1.31
SMARCAL1-213ENST00000496037 ABHD14BQ96IU4 210 aa6.87□□□□□ -1.31
SMARCAL1-213ENST00000496037 FAM210BQ96KR6 192 aa6.87□□□□□ -1.31
SMARCAL1-213ENST00000496037 OR14A2Q96R54 314 aa6.87□□□□□ -1.31
SMARCAL1-213ENST00000496037 IL36GQ9NZH8 169 aa6.87□□□□□ -1.31
SMARCAL1-213ENST00000496037 COPZ2Q9P299 210 aa6.87□□□□□ -1.31
SMARCAL1-213ENST00000496037 F8W036 122 aa6.86□□□□□ -1.31
SMARCAL1-213ENST00000496037 SMLR1H3BR10 107 aa6.86□□□□□ -1.31
SMARCAL1-213ENST00000496037 TGOLN2O43493 480 aa6.86□□□□□ -1.31
SMARCAL1-213ENST00000496037 PRKYO43930 277 aa6.86□□□□□ -1.31
SMARCAL1-213ENST00000496037 SNAPINO95295 136 aa6.86□□□□□ -1.31
SMARCAL1-213ENST00000496037 GTF2F2P13984 249 aa6.86□□□□□ -1.31
SMARCAL1-213ENST00000496037 CRISP1P54107 249 aa6.86□□□□□ -1.31
SMARCAL1-213ENST00000496037 POLR2GP62487 172 aaKnown RBP eCLIP6.86□□□□□ -1.31
SMARCAL1-213ENST00000496037 DHODHQ02127 395 aa6.86□□□□□ -1.31
SMARCAL1-213ENST00000496037 LCE4AQ5TA78 99 aa6.86□□□□□ -1.31
SMARCAL1-213ENST00000496037 CNIH2Q6PI25 160 aa6.86□□□□□ -1.31
SMARCAL1-213ENST00000496037 SLC25A42Q86VD7 318 aa6.86□□□□□ -1.31
SMARCAL1-213ENST00000496037 GAPTQ8N292 157 aa6.86□□□□□ -1.31
SMARCAL1-213ENST00000496037 OR51A2Q8NGJ7 313 aa6.86□□□□□ -1.31
SMARCAL1-213ENST00000496037 ACOT12Q8WYK0 555 aa6.86□□□□□ -1.31
SMARCAL1-213ENST00000496037 EEF1AKMT3Q96AZ1 226 aa6.86□□□□□ -1.31
SMARCAL1-213ENST00000496037 TMEM18Q96B42 140 aa6.86□□□□□ -1.31
SMARCAL1-213ENST00000496037 MRPL53Q96EL3 112 aaKnown RBP6.86□□□□□ -1.31
SMARCAL1-213ENST00000496037 C17orf77Q96MU5 243 aa6.86□□□□□ -1.31
SMARCAL1-213ENST00000496037 SPIN2AQ99865 258 aa6.86□□□□□ -1.31
SMARCAL1-213ENST00000496037 SPIN2BQ9BPZ2 258 aa6.86□□□□□ -1.31
SMARCAL1-213ENST00000496037 C7orf50Q9BRJ6 194 aaKnown RBP6.86□□□□□ -1.31
SMARCAL1-213ENST00000496037 ABRACLQ9P1F3 81 aa6.86□□□□□ -1.31
SMARCAL1-213ENST00000496037 S4R3C0 116 aa6.86□□□□□ -1.31
SMARCAL1-213ENST00000496037 AGRNO00468 2067 aa6.85□□□□□ -1.31
SMARCAL1-213ENST00000496037 H3BTX0 84 aa6.85□□□□□ -1.31
SMARCAL1-213ENST00000496037 IGLV2-23P01705 113 aa6.85□□□□□ -1.31
SMARCAL1-213ENST00000496037 GLAP06280 429 aa6.85□□□□□ -1.31
SMARCAL1-213ENST00000496037 HOXA5P20719 270 aa6.85□□□□□ -1.31
SMARCAL1-213ENST00000496037 BDKRB2P30411 391 aa6.85□□□□□ -1.31
SMARCAL1-213ENST00000496037 FHITP49789 147 aa6.85□□□□□ -1.31
SMARCAL1-213ENST00000496037 XGP55808 180 aa6.85□□□□□ -1.31
SMARCAL1-213ENST00000496037 LINC01620Q4KN68 170 aa6.85□□□□□ -1.31
SMARCAL1-213ENST00000496037 C5orf24Q7Z6I8 188 aa6.85□□□□□ -1.31
SMARCAL1-213ENST00000496037 GID4Q8IVV7 300 aa6.85□□□□□ -1.31
SMARCAL1-213ENST00000496037 MS4A15Q8N5U1 240 aa6.85□□□□□ -1.31
SMARCAL1-213ENST00000496037 NANOGP1Q8N7R0 232 aa6.85□□□□□ -1.31
SMARCAL1-213ENST00000496037 ZNF383Q8NA42 475 aa6.85□□□□□ -1.31
SMARCAL1-213ENST00000496037 TMEM37Q8WXS4 190 aa6.85□□□□□ -1.31
SMARCAL1-213ENST00000496037 LINC00052Q96N35 136 aa6.85□□□□□ -1.31
SMARCAL1-213ENST00000496037 RIMS4Q9H426 269 aaPredicted RBP6.85□□□□□ -1.31
SMARCAL1-213ENST00000496037 BIN3Q9NQY0 253 aa6.85□□□□□ -1.31
SMARCAL1-213ENST00000496037 TXNL4BQ9NX01 149 aaKnown RBP6.85□□□□□ -1.31
SMARCAL1-213ENST00000496037 RNF24Q9Y225 148 aa6.85□□□□□ -1.31
SMARCAL1-213ENST00000496037 ZNF257Q9Y2Q1 563 aa6.85□□□□□ -1.31
SMARCAL1-213ENST00000496037 KRTAP29-1A8MX34 341 aaPredicted RBP6.84□□□□□ -1.31
SMARCAL1-213ENST00000496037 GATCO43716 136 aaKnown RBP6.84□□□□□ -1.31
SMARCAL1-213ENST00000496037 MPC2O95563 127 aa6.84□□□□□ -1.31
SMARCAL1-213ENST00000496037 CTSDP07339 412 aaPredicted RBP6.84□□□□□ -1.31
SMARCAL1-213ENST00000496037 FGF2P09038 288 aa6.84□□□□□ -1.31
SMARCAL1-213ENST00000496037 SULT1A3P0DMM9 295 aa6.84□□□□□ -1.31
SMARCAL1-213ENST00000496037 SULT1A4P0DMN0 295 aa6.84□□□□□ -1.31
SMARCAL1-213ENST00000496037 FGF9P31371 208 aaPredicted RBP6.84□□□□□ -1.31
SMARCAL1-213ENST00000496037 TFPI2P48307 235 aa6.84□□□□□ -1.31
SMARCAL1-213ENST00000496037 NANOS3P60323 173 aaKnown RBP6.84□□□□□ -1.31
SMARCAL1-213ENST00000496037 OPCMLQ14982 345 aa6.84□□□□□ -1.31
SMARCAL1-213ENST00000496037 LGALSLQ3ZCW2 172 aaPredicted RBP6.84□□□□□ -1.31
SMARCAL1-213ENST00000496037 SLC22A6Q4U2R8 563 aa6.84□□□□□ -1.31
SMARCAL1-213ENST00000496037 H2BFWTQ7Z2G1 175 aa6.84□□□□□ -1.31
SMARCAL1-213ENST00000496037 TTC9CQ8N5M4 171 aa6.84□□□□□ -1.31
SMARCAL1-213ENST00000496037 OR11H7Q8NGC8 314 aa6.84□□□□□ -1.31
SMARCAL1-213ENST00000496037 OR1L4Q8NGR5 311 aa6.84□□□□□ -1.31
SMARCAL1-213ENST00000496037 MRPL30Q8TCC3 161 aaKnown RBP6.84□□□□□ -1.31
SMARCAL1-213ENST00000496037 CXorf58Q96LI9 332 aa6.84□□□□□ -1.31
SMARCAL1-213ENST00000496037 C12orf57Q99622 126 aa6.84□□□□□ -1.31
SMARCAL1-213ENST00000496037 SAV1Q9H4B6 383 aaPredicted RBP6.84□□□□□ -1.31
SMARCAL1-213ENST00000496037 AMBNQ9NP70 447 aa6.84□□□□□ -1.31
SMARCAL1-213ENST00000496037 DAZ1Q9NQZ3 744 aaKnown RBP6.84□□□□□ -1.31
SMARCAL1-213ENST00000496037 IGHV3-35A0A0C4DH35 117 aa6.83□□□□□ -1.32
SMARCAL1-213ENST00000496037 A0A1B0GW64 132 aa6.83□□□□□ -1.32
SMARCAL1-213ENST00000496037 TRDV1A0A1B0GX56 115 aa6.83□□□□□ -1.32
SMARCAL1-213ENST00000496037 A0A1W2PP11 408 aa6.83□□□□□ -1.32
SMARCAL1-213ENST00000496037 ZNF705EA8MWA4 302 aaPredicted RBP6.83□□□□□ -1.32
SMARCAL1-213ENST00000496037 E5RGE8 158 aa6.83□□□□□ -1.32
SMARCAL1-213ENST00000496037 M0R129 80 aa6.83□□□□□ -1.32
SMARCAL1-213ENST00000496037 RHODO00212 210 aa6.83□□□□□ -1.32
SMARCAL1-213ENST00000496037 CREBL2O60519 120 aaPredicted RBP6.83□□□□□ -1.32
SMARCAL1-213ENST00000496037 SC5DO75845 299 aa6.83□□□□□ -1.32
SMARCAL1-213ENST00000496037 SMR3BP02814 79 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms