RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 BHLHE40O14503 412 aa2.68□□□□□ -1.98
CCDC39-207ENST00000495817 OR2J2O76002 312 aa2.68□□□□□ -1.98
CCDC39-207ENST00000495817 OR10J4P0C629 311 aa2.68□□□□□ -1.98
CCDC39-207ENST00000495817 CXCL2P19875 107 aa2.68□□□□□ -1.98
CCDC39-207ENST00000495817 FKBP1AP62942 108 aaKnown RBP2.68□□□□□ -1.98
CCDC39-207ENST00000495817 HTR4Q13639 388 aa2.68□□□□□ -1.98
CCDC39-207ENST00000495817 CDK10Q15131 360 aa2.68□□□□□ -1.98
CCDC39-207ENST00000495817 FAM78BQ5VT40 261 aa2.68□□□□□ -1.98
CCDC39-207ENST00000495817 C3orf62Q6ZUJ4 267 aa2.68□□□□□ -1.98
CCDC39-207ENST00000495817 OR4X1Q8NH49 305 aa2.68□□□□□ -1.98
CCDC39-207ENST00000495817 OR13C6PQ8NH95 151 aa2.68□□□□□ -1.98
CCDC39-207ENST00000495817 KIFC1Q9BW19 673 aa2.68□□□□□ -1.98
CCDC39-207ENST00000495817 MND1Q9BWT6 205 aa2.68□□□□□ -1.98
CCDC39-207ENST00000495817 CCDC90BQ9GZT6 254 aa2.68□□□□□ -1.98
CCDC39-207ENST00000495817 C11orf1Q9H5F2 150 aa2.68□□□□□ -1.98
CCDC39-207ENST00000495817 LRTM1Q9HBL6 345 aa2.68□□□□□ -1.98
CCDC39-207ENST00000495817 DOK5Q9P104 306 aa2.68□□□□□ -1.98
CCDC39-207ENST00000495817 HDGFL3Q9Y3E1 203 aa2.68□□□□□ -1.98
CCDC39-207ENST00000495817 HSPB11Q9Y547 144 aa2.68□□□□□ -1.98
CCDC39-207ENST00000495817 TTC28Q96AY4 2481 aa2.68□□□□□ -1.98
CCDC39-207ENST00000495817 PLXND1Q9Y4D7 1925 aa2.68□□□□□ -1.98
CCDC39-207ENST00000495817 WDFY4Q6ZS81 3184 aa2.67□□□□□ -1.98
CCDC39-207ENST00000495817 NLRC5Q86WI3 1866 aa2.67□□□□□ -1.98
CCDC39-207ENST00000495817 CDK5RAP2Q96SN8 1893 aa2.67□□□□□ -1.98
CCDC39-207ENST00000495817 SDHAF1A6NFY7 115 aa2.67□□□□□ -1.98
CCDC39-207ENST00000495817 OR4C46A6NHA9 309 aa2.67□□□□□ -1.98
CCDC39-207ENST00000495817 MRASO14807 208 aa2.67□□□□□ -1.98
CCDC39-207ENST00000495817 DLEU1O43261 78 aa2.67□□□□□ -1.98
CCDC39-207ENST00000495817 MFSD11O43934 449 aa2.67□□□□□ -1.98
CCDC39-207ENST00000495817 OR7C1O76099 320 aaPredicted RBP2.67□□□□□ -1.98
CCDC39-207ENST00000495817 HIST1H1TP22492 207 aaPredicted RBP2.67□□□□□ -1.98
CCDC39-207ENST00000495817 OR10J1P30954 320 aa2.67□□□□□ -1.98
CCDC39-207ENST00000495817 AKR1C3P42330 323 aa2.67□□□□□ -1.98
CCDC39-207ENST00000495817 CA7P43166 264 aa2.67□□□□□ -1.98
CCDC39-207ENST00000495817 DAPP51397 102 aa2.67□□□□□ -1.98
CCDC39-207ENST00000495817 TCTAP57738 103 aa2.67□□□□□ -1.98
CCDC39-207ENST00000495817 TSPEAR-AS2P59090 65 aa2.67□□□□□ -1.98
CCDC39-207ENST00000495817 RAB5BP61020 215 aa2.67□□□□□ -1.98
CCDC39-207ENST00000495817 RHOBP62745 196 aa2.67□□□□□ -1.98
CCDC39-207ENST00000495817 FABP5Q01469 135 aa2.67□□□□□ -1.98
CCDC39-207ENST00000495817 ZNF117Q03924 483 aa2.67□□□□□ -1.98
CCDC39-207ENST00000495817 HIST2H3PS2Q5TEC6 136 aa2.67□□□□□ -1.98
CCDC39-207ENST00000495817 ALKAL1Q6UXT8 129 aa2.67□□□□□ -1.98
CCDC39-207ENST00000495817 GRINAQ7Z429 371 aa2.67□□□□□ -1.98
CCDC39-207ENST00000495817 NAA40Q86UY6 237 aa2.67□□□□□ -1.98
CCDC39-207ENST00000495817 OR5J2Q8NH18 312 aa2.67□□□□□ -1.98
CCDC39-207ENST00000495817 DIRAS2Q96HU8 199 aa2.67□□□□□ -1.98
CCDC39-207ENST00000495817 CAPZA3Q96KX2 299 aa2.67□□□□□ -1.98
CCDC39-207ENST00000495817 OR52B2Q96RD2 323 aa2.67□□□□□ -1.98
CCDC39-207ENST00000495817 NMNAT1Q9HAN9 279 aaPredicted RBP2.67□□□□□ -1.98
CCDC39-207ENST00000495817 POLR1DQ9Y2S0 133 aa2.67□□□□□ -1.98
CCDC39-207ENST00000495817 DSCAML1Q8TD84 2053 aa2.67□□□□□ -1.98
CCDC39-207ENST00000495817 RALGAPA2Q2PPJ7 1873 aa2.67□□□□□ -1.98
CCDC39-207ENST00000495817 USP34Q70CQ2 3546 aa2.66□□□□□ -1.98
CCDC39-207ENST00000495817 COL5A1P20908 1838 aaPredicted RBP2.66□□□□□ -1.98
CCDC39-207ENST00000495817 K7EP13 123 aa2.66□□□□□ -1.98
CCDC39-207ENST00000495817 PDE6DO43924 150 aa2.66□□□□□ -1.98
CCDC39-207ENST00000495817 OGNP20774 298 aaKnown RBP2.66□□□□□ -1.98
CCDC39-207ENST00000495817 NPPCP23582 126 aa2.66□□□□□ -1.98
CCDC39-207ENST00000495817 LPAR6P43657 344 aa2.66□□□□□ -1.98
CCDC39-207ENST00000495817 TAS2R45P59539 299 aa2.66□□□□□ -1.98
CCDC39-207ENST00000495817 DNAJB13P59910 316 aa2.66□□□□□ -1.98
CCDC39-207ENST00000495817 RPS24P62847 133 aaKnown RBP2.66□□□□□ -1.98
CCDC39-207ENST00000495817 WHAMMP3Q1A5X7 153 aa2.66□□□□□ -1.98
CCDC39-207ENST00000495817 ACOT6Q3I5F7 207 aaPredicted RBP2.66□□□□□ -1.98
CCDC39-207ENST00000495817 TMEM78Q5T7P6 136 aa2.66□□□□□ -1.98
CCDC39-207ENST00000495817 SAMD13Q5VXD3 122 aa2.66□□□□□ -1.98
CCDC39-207ENST00000495817 RASL11AQ6T310 242 aa2.66□□□□□ -1.98
CCDC39-207ENST00000495817 ZNF322Q6U7Q0 402 aaPredicted RBP2.66□□□□□ -1.98
CCDC39-207ENST00000495817 ANGPTL5Q86XS5 388 aa2.66□□□□□ -1.98
CCDC39-207ENST00000495817 C1orf158Q8N1D5 194 aa2.66□□□□□ -1.98
CCDC39-207ENST00000495817 OR2T4Q8NH00 348 aa2.66□□□□□ -1.98
CCDC39-207ENST00000495817 MS4A6EQ96DS6 147 aa2.66□□□□□ -1.98
CCDC39-207ENST00000495817 VPS25Q9BRG1 176 aa2.66□□□□□ -1.98
CCDC39-207ENST00000495817 AICDAQ9GZX7 198 aa2.66□□□□□ -1.98
CCDC39-207ENST00000495817 RASL12Q9NYN1 266 aa2.66□□□□□ -1.98
CCDC39-207ENST00000495817 JPT1Q9UK76 154 aa2.66□□□□□ -1.98
CCDC39-207ENST00000495817 ZNF638Q14966 1978 aaKnown RBP2.66□□□□□ -1.98
CCDC39-207ENST00000495817 DENND4CQ5VZ89 1909 aa2.66□□□□□ -1.98
CCDC39-207ENST00000495817 MYO15AQ9UKN7 3530 aa2.65□□□□□ -1.98
CCDC39-207ENST00000495817 A0A0G2JMZ2 1700 aa2.65□□□□□ -1.98
CCDC39-207ENST00000495817 FAM236DA0A1B0GTK5 79 aa2.65□□□□□ -1.99
CCDC39-207ENST00000495817 PQLC2LA1A4F0 135 aa2.65□□□□□ -1.99
CCDC39-207ENST00000495817 C5orf49A4QMS7 147 aa2.65□□□□□ -1.99
CCDC39-207ENST00000495817 CCDC160A6NGH7 325 aa2.65□□□□□ -1.99
CCDC39-207ENST00000495817 FAAHO00519 579 aa2.65□□□□□ -1.99
CCDC39-207ENST00000495817 HMGB3O15347 200 aaKnown RBP2.65□□□□□ -1.99
CCDC39-207ENST00000495817 GSTZ1O43708 216 aaPredicted RBP2.65□□□□□ -1.99
CCDC39-207ENST00000495817 FAM236CP0DP71 79 aa2.65□□□□□ -1.99
CCDC39-207ENST00000495817 CD79AP11912 226 aa2.65□□□□□ -1.99
CCDC39-207ENST00000495817 SLC25A16P16260 332 aa2.65□□□□□ -1.99
CCDC39-207ENST00000495817 S100PP25815 95 aa2.65□□□□□ -1.99
CCDC39-207ENST00000495817 ERP29P30040 261 aaKnown RBP2.65□□□□□ -1.99
CCDC39-207ENST00000495817 DDTP30046 118 aa2.65□□□□□ -1.99
CCDC39-207ENST00000495817 GLRXP35754 106 aa2.65□□□□□ -1.99
CCDC39-207ENST00000495817 MAP2K4P45985 399 aa2.65□□□□□ -1.99
CCDC39-207ENST00000495817 TPI1P60174 286 aa2.65□□□□□ -1.99
CCDC39-207ENST00000495817 CKS1BP61024 79 aa2.65□□□□□ -1.99
CCDC39-207ENST00000495817 FAM229BQ4G0N7 80 aa2.65□□□□□ -1.99
CCDC39-207ENST00000495817 TMEM128Q5BJH2 165 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms