RNA–Protein interactions for RNA: ENST00000495680.2

SHROOM1-206, Transcript of shroom family member 1, humanhuman

TSL 3

Gene SHROOM1, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-206ENST00000495680 FUNDC2Q9BWH2 189 aa8.64□□□□□ -1.03
SHROOM1-206ENST00000495680 ENY2Q9NPA8 101 aa8.64□□□□□ -1.03
SHROOM1-206ENST00000495680 ABCA13Q86UQ4 5058 aa8.64□□□□□ -1.03
SHROOM1-206ENST00000495680 MUC4Q99102 2169 aa8.63□□□□□ -1.03
SHROOM1-206ENST00000495680 FAM90A26D6RGX4 464 aa8.63□□□□□ -1.03
SHROOM1-206ENST00000495680 HNRNPCP07910 306 aaKnown RBP eCLIP8.63□□□□□ -1.03
SHROOM1-206ENST00000495680 OR5AC1P0C628 307 aa8.63□□□□□ -1.03
SHROOM1-206ENST00000495680 AARDQ4LEZ3 155 aa8.63□□□□□ -1.03
SHROOM1-206ENST00000495680 GDF5OSQ5U4N7 250 aa8.63□□□□□ -1.03
SHROOM1-206ENST00000495680 FAAP20Q6NZ36 180 aa8.63□□□□□ -1.03
SHROOM1-206ENST00000495680 POM121L12Q8N7R1 296 aa8.63□□□□□ -1.03
SHROOM1-206ENST00000495680 RNASE11Q8TAA1 199 aaKnown RBP8.63□□□□□ -1.03
SHROOM1-206ENST00000495680 MARCH1Q8TCQ1 289 aa8.63□□□□□ -1.03
SHROOM1-206ENST00000495680 RRNAD1Q96FB5 475 aaKnown RBP8.63□□□□□ -1.03
SHROOM1-206ENST00000495680 ABHD1Q96SE0 405 aa8.63□□□□□ -1.03
SHROOM1-206ENST00000495680 COPZ2Q9P299 210 aa8.63□□□□□ -1.03
SHROOM1-206ENST00000495680 TRAV30A0A087WSZ9 112 aa8.62□□□□□ -1.03
SHROOM1-206ENST00000495680 PRSS29PA6NIE9 313 aa8.62□□□□□ -1.03
SHROOM1-206ENST00000495680 FAM25AB3EWG3 89 aa8.62□□□□□ -1.03
SHROOM1-206ENST00000495680 FAM25CB3EWG5 89 aa8.62□□□□□ -1.03
SHROOM1-206ENST00000495680 FAM25GB3EWG6 89 aa8.62□□□□□ -1.03
SHROOM1-206ENST00000495680 H3BMM0 161 aa8.62□□□□□ -1.03
SHROOM1-206ENST00000495680 ATG12O94817 140 aa8.62□□□□□ -1.03
SHROOM1-206ENST00000495680 OR10J1P30954 320 aa8.62□□□□□ -1.03
SHROOM1-206ENST00000495680 FXYD7P58549 80 aa8.62□□□□□ -1.03
SHROOM1-206ENST00000495680 SPCS3P61009 180 aa8.62□□□□□ -1.03
SHROOM1-206ENST00000495680 MEF2DQ14814 521 aa8.62□□□□□ -1.03
SHROOM1-206ENST00000495680 SCGB2B2Q4G0G5 96 aa8.62□□□□□ -1.03
SHROOM1-206ENST00000495680 ARRDC1Q8N5I2 433 aa8.62□□□□□ -1.03
SHROOM1-206ENST00000495680 OR1S2Q8NGQ3 325 aa8.62□□□□□ -1.03
SHROOM1-206ENST00000495680 Q8WTZ3 238 aa8.62□□□□□ -1.03
SHROOM1-206ENST00000495680 GPR146Q96CH1 333 aa8.62□□□□□ -1.03
SHROOM1-206ENST00000495680 NARS2Q96I59 477 aaKnown RBP8.62□□□□□ -1.03
SHROOM1-206ENST00000495680 NAA50Q9GZZ1 169 aaKnown RBP8.62□□□□□ -1.03
SHROOM1-206ENST00000495680 PLA2G2EQ9NZK7 142 aa8.62□□□□□ -1.03
SHROOM1-206ENST00000495680 EXTL2Q9UBQ6 330 aa8.62□□□□□ -1.03
SHROOM1-206ENST00000495680 MTFP1Q9UDX5 166 aa8.62□□□□□ -1.03
SHROOM1-206ENST00000495680 CACNG5Q9UF02 275 aa8.62□□□□□ -1.03
SHROOM1-206ENST00000495680 A0A087WXM4 84 aa8.61□□□□□ -1.03
SHROOM1-206ENST00000495680 RPS10-NUDT3A0A1W2PQS6 291 aa8.61□□□□□ -1.03
SHROOM1-206ENST00000495680 BUB3O43684 328 aa8.61□□□□□ -1.03
SHROOM1-206ENST00000495680 CDS2O95674 445 aa8.61□□□□□ -1.03
SHROOM1-206ENST00000495680 IGKV3-20P01619 116 aa8.61□□□□□ -1.03
SHROOM1-206ENST00000495680 CD74P04233 296 aa8.61□□□□□ -1.03
SHROOM1-206ENST00000495680 IL4P05112 153 aa8.61□□□□□ -1.03
SHROOM1-206ENST00000495680 HTR2BP41595 481 aa8.61□□□□□ -1.03
SHROOM1-206ENST00000495680 EMP1P54849 157 aa8.61□□□□□ -1.03
SHROOM1-206ENST00000495680 YPEL3P61236 119 aaPredicted RBP8.61□□□□□ -1.03
SHROOM1-206ENST00000495680 C2orf83Q53S99 150 aa8.61□□□□□ -1.03
SHROOM1-206ENST00000495680 ZNF705AQ6ZN79 300 aaPredicted RBP8.61□□□□□ -1.03
SHROOM1-206ENST00000495680 SELENOHQ8IZQ5 122 aaKnown RBP8.61□□□□□ -1.03
SHROOM1-206ENST00000495680 CCDC71LQ8N9Z2 235 aa8.61□□□□□ -1.03
SHROOM1-206ENST00000495680 SLC24A4Q8NFF2 622 aa8.61□□□□□ -1.03
SHROOM1-206ENST00000495680 OR52E5Q8NH55 327 aa8.61□□□□□ -1.03
SHROOM1-206ENST00000495680 TERB2Q8NHR7 220 aa8.61□□□□□ -1.03
SHROOM1-206ENST00000495680 GLYATL2Q8WU03 294 aa8.61□□□□□ -1.03
SHROOM1-206ENST00000495680 NPIPB3Q92617 1050 aa8.61□□□□□ -1.03
SHROOM1-206ENST00000495680 RTBDNQ9BSG5 229 aaPredicted RBP8.61□□□□□ -1.03
SHROOM1-206ENST00000495680 NDUFAF3Q9BU61 184 aa8.61□□□□□ -1.03
SHROOM1-206ENST00000495680 TMEM222Q9H0R3 208 aa8.61□□□□□ -1.03
SHROOM1-206ENST00000495680 NRN1Q9NPD7 142 aa8.61□□□□□ -1.03
SHROOM1-206ENST00000495680 HEYLQ9NQ87 328 aaPredicted RBP8.61□□□□□ -1.03
SHROOM1-206ENST00000495680 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.61□□□□□ -1.03
SHROOM1-206ENST00000495680 PRR13Q9NZ81 148 aa8.61□□□□□ -1.03
SHROOM1-206ENST00000495680 IGLV2-18A0A075B6J9 118 aa8.6□□□□□ -1.03
SHROOM1-206ENST00000495680 SCGB2A1O75556 95 aa8.6□□□□□ -1.03
SHROOM1-206ENST00000495680 RAB3DO95716 219 aa8.6□□□□□ -1.03
SHROOM1-206ENST00000495680 P0DMU3 169 aa8.6□□□□□ -1.03
SHROOM1-206ENST00000495680 FAM231AP0DMU4 169 aa8.6□□□□□ -1.03
SHROOM1-206ENST00000495680 FAM231CP0DMU5 169 aa8.6□□□□□ -1.03
SHROOM1-206ENST00000495680 MED14OSP0DP75 135 aa8.6□□□□□ -1.03
SHROOM1-206ENST00000495680 HLA-DRB4P13762 266 aa8.6□□□□□ -1.03
SHROOM1-206ENST00000495680 EIF2B2P49770 351 aaKnown RBP8.6□□□□□ -1.03
SHROOM1-206ENST00000495680 SIGLEC15Q6ZMC9 328 aa8.6□□□□□ -1.03
SHROOM1-206ENST00000495680 CENPSQ8N2Z9 138 aa8.6□□□□□ -1.03
SHROOM1-206ENST00000495680 TMEM229BQ8NBD8 167 aa8.6□□□□□ -1.03
SHROOM1-206ENST00000495680 ZFAND1Q8TCF1 268 aa8.6□□□□□ -1.03
SHROOM1-206ENST00000495680 ACY3Q96HD9 319 aa8.6□□□□□ -1.03
SHROOM1-206ENST00000495680 WDR12Q9GZL7 423 aaKnown RBP8.6□□□□□ -1.03
SHROOM1-206ENST00000495680 VCX3AQ9NNX9 186 aa8.6□□□□□ -1.03
SHROOM1-206ENST00000495680 HLA-DRB4X5D2U9 266 aa8.6□□□□□ -1.03
SHROOM1-206ENST00000495680 CEBPZOSA8MTT3 80 aa8.59□□□□□ -1.03
SHROOM1-206ENST00000495680 ZNF705FA8MVS1 300 aaPredicted RBP8.59□□□□□ -1.03
SHROOM1-206ENST00000495680 TOMM40O96008 361 aa8.59□□□□□ -1.03
SHROOM1-206ENST00000495680 ZNF705DP0CH99 300 aaPredicted RBP8.59□□□□□ -1.03
SHROOM1-206ENST00000495680 ZNF705BP0CI00 300 aaPredicted RBP8.59□□□□□ -1.03
SHROOM1-206ENST00000495680 PSG1P11464 419 aa8.59□□□□□ -1.03
SHROOM1-206ENST00000495680 SLC25A4P12235 298 aa8.59□□□□□ -1.03
SHROOM1-206ENST00000495680 TBPP20226 339 aa8.59□□□□□ -1.03
SHROOM1-206ENST00000495680 RORCP51449 518 aa8.59□□□□□ -1.03
SHROOM1-206ENST00000495680 AP2S1P53680 142 aaPredicted RBP8.59□□□□□ -1.03
SHROOM1-206ENST00000495680 SNRPD3P62318 126 aaKnown RBP8.59□□□□□ -1.03
SHROOM1-206ENST00000495680 STEAP1BQ6NZ63 245 aa8.59□□□□□ -1.03
SHROOM1-206ENST00000495680 FAM219AQ8IW50 185 aa8.59□□□□□ -1.03
SHROOM1-206ENST00000495680 OR51G1Q8NGK1 321 aa8.59□□□□□ -1.03
SHROOM1-206ENST00000495680 RNASEH2CQ8TDP1 164 aaKnown RBP8.59□□□□□ -1.03
SHROOM1-206ENST00000495680 RBPMSQ93062 196 aaKnown RBP8.59□□□□□ -1.03
SHROOM1-206ENST00000495680 KRTAP4-5Q9BYR2 181 aa8.59□□□□□ -1.03
SHROOM1-206ENST00000495680 MIXL1Q9H2W2 232 aa8.59□□□□□ -1.03
SHROOM1-206ENST00000495680 NAA60Q9H7X0 242 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms