RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 NXPH3O95157 252 aa9.13□□□□□ -0.95
SKA1-205ENST00000494518 RND2P52198 227 aa9.13□□□□□ -0.95
SKA1-205ENST00000494518 SCGB2B2Q4G0G5 96 aa9.13□□□□□ -0.95
SKA1-205ENST00000494518 MARCH1Q8TCQ1 289 aa9.13□□□□□ -0.95
SKA1-205ENST00000494518 ZNF486Q96H40 463 aaPredicted RBP9.13□□□□□ -0.95
SKA1-205ENST00000494518 HRH4Q9H3N8 390 aa9.13□□□□□ -0.95
SKA1-205ENST00000494518 HELTA6NFD8 242 aa9.12□□□□□ -0.95
SKA1-205ENST00000494518 ATG12O94817 140 aa9.12□□□□□ -0.95
SKA1-205ENST00000494518 FAAP20Q6NZ36 180 aa9.12□□□□□ -0.95
SKA1-205ENST00000494518 CENPSQ8N2Z9 138 aa9.12□□□□□ -0.95
SKA1-205ENST00000494518 CCDC71LQ8N9Z2 235 aa9.12□□□□□ -0.95
SKA1-205ENST00000494518 CSNK1G2-AS1Q8NCQ2 148 aa9.12□□□□□ -0.95
SKA1-205ENST00000494518 LHFPL5Q8TAF8 219 aa9.12□□□□□ -0.95
SKA1-205ENST00000494518 RAB40CQ96S21 281 aa9.12□□□□□ -0.95
SKA1-205ENST00000494518 XCL2Q9UBD3 114 aa9.12□□□□□ -0.95
SKA1-205ENST00000494518 EXTL2Q9UBQ6 330 aa9.12□□□□□ -0.95
SKA1-205ENST00000494518 DEFB131BA0A096LNP1 70 aa9.11□□□□□ -0.95
SKA1-205ENST00000494518 M0R2N4 97 aa9.11□□□□□ -0.95
SKA1-205ENST00000494518 SCGB2A1O75556 95 aa9.11□□□□□ -0.95
SKA1-205ENST00000494518 HNRNPCP07910 306 aaKnown RBP eCLIP9.11□□□□□ -0.95
SKA1-205ENST00000494518 OR5AC1P0C628 307 aa9.11□□□□□ -0.95
SKA1-205ENST00000494518 IGLC1P0CG04 106 aa9.11□□□□□ -0.95
SKA1-205ENST00000494518 UCP1P25874 307 aa9.11□□□□□ -0.95
SKA1-205ENST00000494518 RPL5P46777 297 aaKnown RBP9.11□□□□□ -0.95
SKA1-205ENST00000494518 DEFB1P60022 68 aa9.11□□□□□ -0.95
SKA1-205ENST00000494518 DHODHQ02127 395 aa9.11□□□□□ -0.95
SKA1-205ENST00000494518 MEF2DQ14814 521 aa9.11□□□□□ -0.95
SKA1-205ENST00000494518 USF2Q15853 346 aaPredicted RBP9.11□□□□□ -0.95
SKA1-205ENST00000494518 C12orf74Q32Q52 190 aa9.11□□□□□ -0.95
SKA1-205ENST00000494518 BSXQ3C1V8 233 aa9.11□□□□□ -0.95
SKA1-205ENST00000494518 TMEM41BQ5BJD5 291 aa9.11□□□□□ -0.95
SKA1-205ENST00000494518 PRSS54Q6PEW0 395 aa9.11□□□□□ -0.95
SKA1-205ENST00000494518 C16orf54Q6UWD8 224 aa9.11□□□□□ -0.95
SKA1-205ENST00000494518 GSG1LQ6UXU4 331 aa9.11□□□□□ -0.95
SKA1-205ENST00000494518 ARRDC1Q8N5I2 433 aa9.11□□□□□ -0.95
SKA1-205ENST00000494518 ZFAND1Q8TCF1 268 aa9.11□□□□□ -0.95
SKA1-205ENST00000494518 GLMPQ8WWB7 406 aa9.11□□□□□ -0.95
SKA1-205ENST00000494518 NAA50Q9GZZ1 169 aaKnown RBP9.11□□□□□ -0.95
SKA1-205ENST00000494518 HEYLQ9NQ87 328 aaPredicted RBP9.11□□□□□ -0.95
SKA1-205ENST00000494518 CACNG5Q9UF02 275 aa9.11□□□□□ -0.95
SKA1-205ENST00000494518 U3KQE9 123 aa9.11□□□□□ -0.95
SKA1-205ENST00000494518 RPS10-NUDT3A0A1W2PQS6 291 aa9.1□□□□□ -0.95
SKA1-205ENST00000494518 CEBPZOSA8MTT3 80 aa9.1□□□□□ -0.95
SKA1-205ENST00000494518 RAB3DO95716 219 aa9.1□□□□□ -0.95
SKA1-205ENST00000494518 IGKV3-20P01619 116 aa9.1□□□□□ -0.95
SKA1-205ENST00000494518 IL4P05112 153 aa9.1□□□□□ -0.95
SKA1-205ENST00000494518 OR10J1P30954 320 aa9.1□□□□□ -0.95
SKA1-205ENST00000494518 HTR2BP41595 481 aa9.1□□□□□ -0.95
SKA1-205ENST00000494518 RORCP51449 518 aa9.1□□□□□ -0.95
SKA1-205ENST00000494518 FXYD7P58549 80 aa9.1□□□□□ -0.95
SKA1-205ENST00000494518 SPCS3P61009 180 aa9.1□□□□□ -0.95
SKA1-205ENST00000494518 MZT2AQ6P582 158 aa9.1□□□□□ -0.95
SKA1-205ENST00000494518 OR1S2Q8NGQ3 325 aa9.1□□□□□ -0.95
SKA1-205ENST00000494518 Q8WTZ3 238 aa9.1□□□□□ -0.95
SKA1-205ENST00000494518 ACY3Q96HD9 319 aa9.1□□□□□ -0.95
SKA1-205ENST00000494518 ABHD1Q96SE0 405 aa9.1□□□□□ -0.95
SKA1-205ENST00000494518 MTFP1Q9UDX5 166 aa9.1□□□□□ -0.95
SKA1-205ENST00000494518 TRAV30A0A087WSZ9 112 aa9.09□□□□□ -0.95
SKA1-205ENST00000494518 TEX13DA0A0J9YY54 714 aaPredicted RBP9.09□□□□□ -0.95
SKA1-205ENST00000494518 FAM90A26D6RGX4 464 aa9.09□□□□□ -0.95
SKA1-205ENST00000494518 TNFAIP8O95379 198 aa9.09□□□□□ -0.95
SKA1-205ENST00000494518 EIF2B2P49770 351 aaKnown RBP9.09□□□□□ -0.95
SKA1-205ENST00000494518 EMP1P54849 157 aa9.09□□□□□ -0.95
SKA1-205ENST00000494518 STEAP1BQ6NZ63 245 aa9.09□□□□□ -0.95
SKA1-205ENST00000494518 SELENOHQ8IZQ5 122 aaKnown RBP9.09□□□□□ -0.95
SKA1-205ENST00000494518 SLC24A4Q8NFF2 622 aa9.09□□□□□ -0.95
SKA1-205ENST00000494518 TERB2Q8NHR7 220 aa9.09□□□□□ -0.95
SKA1-205ENST00000494518 TMEM170AQ8WVE7 144 aa9.09□□□□□ -0.95
SKA1-205ENST00000494518 GPR146Q96CH1 333 aa9.09□□□□□ -0.95
SKA1-205ENST00000494518 RNF126Q9BV68 326 aa9.09□□□□□ -0.95
SKA1-205ENST00000494518 TMEM222Q9H0R3 208 aa9.09□□□□□ -0.95
SKA1-205ENST00000494518 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.09□□□□□ -0.95
SKA1-205ENST00000494518 PRR13Q9NZ81 148 aa9.09□□□□□ -0.95
SKA1-205ENST00000494518 C14orf166Q9Y224 244 aaKnown RBP9.09□□□□□ -0.95
SKA1-205ENST00000494518 IGHV3OR16-12A0A075B7B8 117 aa9.08□□□□□ -0.96
SKA1-205ENST00000494518 AMBPP02760 352 aa9.08□□□□□ -0.96
SKA1-205ENST00000494518 CD74P04233 296 aa9.08□□□□□ -0.96
SKA1-205ENST00000494518 TBPP20226 339 aa9.08□□□□□ -0.96
SKA1-205ENST00000494518 TAS2R19P59542 299 aa9.08□□□□□ -0.96
SKA1-205ENST00000494518 GDF5OSQ5U4N7 250 aa9.08□□□□□ -0.96
SKA1-205ENST00000494518 TMEM229BQ8NBD8 167 aa9.08□□□□□ -0.96
SKA1-205ENST00000494518 GLYATL2Q8WU03 294 aa9.08□□□□□ -0.96
SKA1-205ENST00000494518 NPIPB3Q92617 1050 aa9.08□□□□□ -0.96
SKA1-205ENST00000494518 RTBDNQ9BSG5 229 aaPredicted RBP9.08□□□□□ -0.96
SKA1-205ENST00000494518 NAA60Q9H7X0 242 aa9.08□□□□□ -0.96
SKA1-205ENST00000494518 NACAE9PAV3 2078 aa9.08□□□□□ -0.96
SKA1-205ENST00000494518 A0A1B0GVY2 172 aa9.07□□□□□ -0.96
SKA1-205ENST00000494518 H3BMM0 161 aa9.07□□□□□ -0.96
SKA1-205ENST00000494518 CDS2O95674 445 aa9.07□□□□□ -0.96
SKA1-205ENST00000494518 SLC25A4P12235 298 aa9.07□□□□□ -0.96
SKA1-205ENST00000494518 NPY1RP25929 384 aa9.07□□□□□ -0.96
SKA1-205ENST00000494518 YPEL3P61236 119 aaPredicted RBP9.07□□□□□ -0.96
SKA1-205ENST00000494518 SNRPD3P62318 126 aaKnown RBP9.07□□□□□ -0.96
SKA1-205ENST00000494518 C2orf83Q53S99 150 aa9.07□□□□□ -0.96
SKA1-205ENST00000494518 TMEM268Q5VZI3 342 aa9.07□□□□□ -0.96
SKA1-205ENST00000494518 SIGLEC15Q6ZMC9 328 aa9.07□□□□□ -0.96
SKA1-205ENST00000494518 OR51G1Q8NGK1 321 aa9.07□□□□□ -0.96
SKA1-205ENST00000494518 OR52E5Q8NH55 327 aa9.07□□□□□ -0.96
SKA1-205ENST00000494518 RBPMSQ93062 196 aaKnown RBP9.07□□□□□ -0.96
SKA1-205ENST00000494518 PBDC1Q9BVG4 233 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms