RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 MS4A6AQ9H2W1 248 aa6.28□□□□□ -1.4
LRCH3-219ENST00000494069 HEYLQ9NQ87 328 aaPredicted RBP6.28□□□□□ -1.4
LRCH3-219ENST00000494069 RSL24D1Q9UHA3 163 aaKnown RBP6.28□□□□□ -1.4
LRCH3-219ENST00000494069 TMEM56-RWDD3S4R434 201 aa6.28□□□□□ -1.4
LRCH3-219ENST00000494069 KIR2DL5BA0A0G2JN68 375 aa6.27□□□□□ -1.41
LRCH3-219ENST00000494069 KIR2DL5BA0A0G2JPC4 375 aa6.27□□□□□ -1.41
LRCH3-219ENST00000494069 UBE2CO00762 179 aa6.27□□□□□ -1.41
LRCH3-219ENST00000494069 NOL3O60936 208 aaKnown RBP6.27□□□□□ -1.41
LRCH3-219ENST00000494069 IGLC1P0CG04 106 aa6.27□□□□□ -1.41
LRCH3-219ENST00000494069 NPPCP23582 126 aa6.27□□□□□ -1.41
LRCH3-219ENST00000494069 BMI1P35226 326 aa6.27□□□□□ -1.41
LRCH3-219ENST00000494069 HTR2BP41595 481 aa6.27□□□□□ -1.41
LRCH3-219ENST00000494069 RND2P52198 227 aa6.27□□□□□ -1.41
LRCH3-219ENST00000494069 DEFB131AP59861 70 aa6.27□□□□□ -1.41
LRCH3-219ENST00000494069 RPL11P62913 178 aaKnown RBP6.27□□□□□ -1.41
LRCH3-219ENST00000494069 KLF9Q13886 244 aaPredicted RBP6.27□□□□□ -1.41
LRCH3-219ENST00000494069 C2orf83Q53S99 150 aa6.27□□□□□ -1.41
LRCH3-219ENST00000494069 NMSQ5H8A3 153 aa6.27□□□□□ -1.41
LRCH3-219ENST00000494069 XP32Q5T750 250 aa6.27□□□□□ -1.41
LRCH3-219ENST00000494069 KIR2DL5AQ8N109 375 aa6.27□□□□□ -1.41
LRCH3-219ENST00000494069 SLC24A4Q8NFF2 622 aa6.27□□□□□ -1.41
LRCH3-219ENST00000494069 KIR2DL5BQ8NHK3 375 aa6.27□□□□□ -1.41
LRCH3-219ENST00000494069 TRIM63Q969Q1 353 aa6.27□□□□□ -1.41
LRCH3-219ENST00000494069 SCP2D1Q9UJQ7 156 aa6.27□□□□□ -1.41
LRCH3-219ENST00000494069 TP53TG1Q9Y2A0 90 aa6.27□□□□□ -1.41
LRCH3-219ENST00000494069 VPS13DQ5THJ4 4388 aa6.26□□□□□ -1.41
LRCH3-219ENST00000494069 CXorf65A6NEN9 183 aa6.26□□□□□ -1.41
LRCH3-219ENST00000494069 DNASE2O00115 360 aaPredicted RBP6.26□□□□□ -1.41
LRCH3-219ENST00000494069 SULT1A3P0DMM9 295 aa6.26□□□□□ -1.41
LRCH3-219ENST00000494069 SULT1A4P0DMN0 295 aa6.26□□□□□ -1.41
LRCH3-219ENST00000494069 NPY1RP25929 384 aa6.26□□□□□ -1.41
LRCH3-219ENST00000494069 CRYBB3P26998 211 aa6.26□□□□□ -1.41
LRCH3-219ENST00000494069 P2RY1P47900 373 aa6.26□□□□□ -1.41
LRCH3-219ENST00000494069 PAFAH1B2P68402 229 aa6.26□□□□□ -1.41
LRCH3-219ENST00000494069 TNFRSF9Q07011 255 aa6.26□□□□□ -1.41
LRCH3-219ENST00000494069 ZNF79Q15937 498 aa6.26□□□□□ -1.41
LRCH3-219ENST00000494069 PYDC2Q56P42 97 aa6.26□□□□□ -1.41
LRCH3-219ENST00000494069 TMED4Q7Z7H5 227 aa6.26□□□□□ -1.41
LRCH3-219ENST00000494069 NPIPB3Q92617 1050 aa6.26□□□□□ -1.41
LRCH3-219ENST00000494069 IL22RA2Q969J5 263 aa6.26□□□□□ -1.41
LRCH3-219ENST00000494069 METTL26Q96S19 204 aa6.26□□□□□ -1.41
LRCH3-219ENST00000494069 CSTL1Q9H114 145 aa6.26□□□□□ -1.41
LRCH3-219ENST00000494069 RBKSQ9H477 322 aa6.26□□□□□ -1.41
LRCH3-219ENST00000494069 RABL2AQ9UBK7 228 aaPredicted RBP6.26□□□□□ -1.41
LRCH3-219ENST00000494069 RABAC1Q9UI14 185 aa6.26□□□□□ -1.41
LRCH3-219ENST00000494069 RABL2BQ9UNT1 228 aa6.26□□□□□ -1.41
LRCH3-219ENST00000494069 KCNIP3Q9Y2W7 256 aa6.26□□□□□ -1.41
LRCH3-219ENST00000494069 V9GYH0 126 aa6.26□□□□□ -1.41
LRCH3-219ENST00000494069 A0A0B4J2A0 478 aa6.25□□□□□ -1.41
LRCH3-219ENST00000494069 RPS10-NUDT3A0A1W2PQS6 291 aa6.25□□□□□ -1.41
LRCH3-219ENST00000494069 CCDC160A6NGH7 325 aa6.25□□□□□ -1.41
LRCH3-219ENST00000494069 KNCNA6PVL3 124 aa6.25□□□□□ -1.41
LRCH3-219ENST00000494069 MPTX1A8MV57 137 aa6.25□□□□□ -1.41
LRCH3-219ENST00000494069 K7EQG2 157 aa6.25□□□□□ -1.41
LRCH3-219ENST00000494069 DEFB4AO15263 64 aa6.25□□□□□ -1.41
LRCH3-219ENST00000494069 ZNF688P0C7X2 276 aa6.25□□□□□ -1.41
LRCH3-219ENST00000494069 OR10J1P30954 320 aa6.25□□□□□ -1.41
LRCH3-219ENST00000494069 CMC4P56277 68 aaPredicted RBP6.25□□□□□ -1.41
LRCH3-219ENST00000494069 SMCO1Q147U7 214 aa6.25□□□□□ -1.41
LRCH3-219ENST00000494069 USF2Q15853 346 aaPredicted RBP6.25□□□□□ -1.41
LRCH3-219ENST00000494069 GSG1LQ6UXU4 331 aa6.25□□□□□ -1.41
LRCH3-219ENST00000494069 LGI3Q8N145 548 aa6.25□□□□□ -1.41
LRCH3-219ENST00000494069 STXBP6Q8NFX7 210 aa6.25□□□□□ -1.41
LRCH3-219ENST00000494069 RNASEH2CQ8TDP1 164 aaKnown RBP6.25□□□□□ -1.41
LRCH3-219ENST00000494069 ACY3Q96HD9 319 aa6.25□□□□□ -1.41
LRCH3-219ENST00000494069 RBM38Q9H0Z9 239 aaKnown RBP6.25□□□□□ -1.41
LRCH3-219ENST00000494069 HSPB7Q9UBY9 170 aa6.25□□□□□ -1.41
LRCH3-219ENST00000494069 SHPKQ9UHJ6 478 aa6.25□□□□□ -1.41
LRCH3-219ENST00000494069 U3KQE9 123 aa6.25□□□□□ -1.41
LRCH3-219ENST00000494069 AGRNO00468 2067 aa6.25□□□□□ -1.41
LRCH3-219ENST00000494069 DNAH10Q8IVF4 4471 aa6.25□□□□□ -1.41
LRCH3-219ENST00000494069 TRAV30A0A087WSZ9 112 aa6.24□□□□□ -1.41
LRCH3-219ENST00000494069 JTBO76095 146 aa6.24□□□□□ -1.41
LRCH3-219ENST00000494069 CA1P00915 261 aaPredicted RBP6.24□□□□□ -1.41
LRCH3-219ENST00000494069 IFNA10P01566 189 aa6.24□□□□□ -1.41
LRCH3-219ENST00000494069 GIG44P09565 113 aaPredicted RBP6.24□□□□□ -1.41
LRCH3-219ENST00000494069 SLC25A4P12235 298 aa6.24□□□□□ -1.41
LRCH3-219ENST00000494069 CCR6P51684 374 aa6.24□□□□□ -1.41
LRCH3-219ENST00000494069 YPEL3P61236 119 aaPredicted RBP6.24□□□□□ -1.41
LRCH3-219ENST00000494069 CEMP1Q6PRD7 247 aaPredicted RBP6.24□□□□□ -1.41
LRCH3-219ENST00000494069 CCDC190Q86UF4 302 aa6.24□□□□□ -1.41
LRCH3-219ENST00000494069 Q8N3U1 123 aa6.24□□□□□ -1.41
LRCH3-219ENST00000494069 TOMM5Q8N4H5 51 aa6.24□□□□□ -1.41
LRCH3-219ENST00000494069 OR1S2Q8NGQ3 325 aa6.24□□□□□ -1.41
LRCH3-219ENST00000494069 DTD1Q8TEA8 209 aa6.24□□□□□ -1.41
LRCH3-219ENST00000494069 Q8WTZ3 238 aa6.24□□□□□ -1.41
LRCH3-219ENST00000494069 GLMPQ8WWB7 406 aa6.24□□□□□ -1.41
LRCH3-219ENST00000494069 SCGB3A2Q96PL1 93 aa6.24□□□□□ -1.41
LRCH3-219ENST00000494069 SSBP4Q9BWG4 385 aaPredicted RBP6.24□□□□□ -1.41
LRCH3-219ENST00000494069 TMEM231Q9H6L2 316 aa6.24□□□□□ -1.41
LRCH3-219ENST00000494069 KMT2AQ03164 3969 aa6.24□□□□□ -1.41
LRCH3-219ENST00000494069 IGKV1D-37A0A075B6S9 117 aa6.23□□□□□ -1.41
LRCH3-219ENST00000494069 TRAV2A0A0B4J234 112 aa6.23□□□□□ -1.41
LRCH3-219ENST00000494069 A0A1W2PS18 150 aa6.23□□□□□ -1.41
LRCH3-219ENST00000494069 PITX3O75364 302 aa6.23□□□□□ -1.41
LRCH3-219ENST00000494069 IFNA4P05014 189 aa6.23□□□□□ -1.41
LRCH3-219ENST00000494069 IL4P05112 153 aa6.23□□□□□ -1.41
LRCH3-219ENST00000494069 CD5P06127 495 aa6.23□□□□□ -1.41
LRCH3-219ENST00000494069 HNRNPCP07910 306 aaKnown RBP eCLIP6.23□□□□□ -1.41
LRCH3-219ENST00000494069 RD3LP0DJH9 198 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms