RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 IGHV3-23P01764 117 aa11.54□□□□□ -0.56
ACTB-213ENST00000493945 C1QBP02746 253 aa11.54□□□□□ -0.56
ACTB-213ENST00000493945 BMI1P35226 326 aa11.54□□□□□ -0.56
ACTB-213ENST00000493945 KIAA0141Q14154 515 aaPredicted RBP11.54□□□□□ -0.56
ACTB-213ENST00000493945 GAMTQ14353 236 aa11.54□□□□□ -0.56
ACTB-213ENST00000493945 TEPPQ6URK8 271 aa11.54□□□□□ -0.56
ACTB-213ENST00000493945 SPATA3Q8NHX4 192 aa11.54□□□□□ -0.56
ACTB-213ENST00000493945 NPIPB3Q92617 1050 aa11.54□□□□□ -0.56
ACTB-213ENST00000493945 ST6GAL2Q96JF0 529 aa11.54□□□□□ -0.56
ACTB-213ENST00000493945 ATP5SQ99766 215 aa11.54□□□□□ -0.56
ACTB-213ENST00000493945 GINS3Q9BRX5 216 aa11.54□□□□□ -0.56
ACTB-213ENST00000493945 MFFQ9GZY8 342 aa11.54□□□□□ -0.56
ACTB-213ENST00000493945 PFDN2Q9UHV9 154 aa11.54□□□□□ -0.56
ACTB-213ENST00000493945 TNFSF18Q9UNG2 199 aa11.54□□□□□ -0.56
ACTB-213ENST00000493945 COL6A5A8TX70 2615 aa11.53□□□□□ -0.56
ACTB-213ENST00000493945 BORCS7-ASMTA0A0B4J1R7 106 aa11.53□□□□□ -0.56
ACTB-213ENST00000493945 A0A0D9SG52 128 aa11.53□□□□□ -0.56
ACTB-213ENST00000493945 PRSS46E5RG02 174 aa11.53□□□□□ -0.56
ACTB-213ENST00000493945 C17orf112F2Z3M2 114 aa11.53□□□□□ -0.56
ACTB-213ENST00000493945 SELENOTP62341 195 aa11.53□□□□□ -0.56
ACTB-213ENST00000493945 ZNF600Q6ZNG1 722 aa11.53□□□□□ -0.56
ACTB-213ENST00000493945 ZNF709Q8N972 641 aa11.53□□□□□ -0.56
ACTB-213ENST00000493945 SCGB1C1Q8TD33 95 aa11.53□□□□□ -0.56
ACTB-213ENST00000493945 Q8WTZ3 238 aa11.53□□□□□ -0.56
ACTB-213ENST00000493945 NARS2Q96I59 477 aaKnown RBP11.53□□□□□ -0.56
ACTB-213ENST00000493945 PEMTQ9UBM1 199 aa11.53□□□□□ -0.56
ACTB-213ENST00000493945 S4R3C0 116 aa11.53□□□□□ -0.56
ACTB-213ENST00000493945 UBE2L5PA0A1B0GUS4 154 aa11.52□□□□□ -0.57
ACTB-213ENST00000493945 KANTRA0A1W2PQU2 76 aa11.52□□□□□ -0.57
ACTB-213ENST00000493945 PMS2P5A8MQ11 134 aa11.52□□□□□ -0.57
ACTB-213ENST00000493945 NDUFA4O00483 81 aa11.52□□□□□ -0.57
ACTB-213ENST00000493945 KRTAP10-3P60369 221 aa11.52□□□□□ -0.57
ACTB-213ENST00000493945 YPEL3P61236 119 aaPredicted RBP11.52□□□□□ -0.57
ACTB-213ENST00000493945 EIF5AP63241 154 aaKnown RBP11.52□□□□□ -0.57
ACTB-213ENST00000493945 CLINT1Q14677 625 aa11.52□□□□□ -0.57
ACTB-213ENST00000493945 C1QL4Q86Z23 238 aa11.52□□□□□ -0.57
ACTB-213ENST00000493945 TRGV9Q99603 122 aa11.52□□□□□ -0.57
ACTB-213ENST00000493945 RNF24Q9Y225 148 aa11.52□□□□□ -0.57
ACTB-213ENST00000493945 IGHV4OR15-8A0A075B7B6 117 aa11.51□□□□□ -0.57
ACTB-213ENST00000493945 A0A087WW49 117 aa11.51□□□□□ -0.57
ACTB-213ENST00000493945 IGHV3-48P01763 117 aa11.51□□□□□ -0.57
ACTB-213ENST00000493945 HOXD3P31249 432 aaPredicted RBP11.51□□□□□ -0.57
ACTB-213ENST00000493945 NHLH2Q02577 135 aa11.51□□□□□ -0.57
ACTB-213ENST00000493945 VWC2Q2TAL6 325 aa11.51□□□□□ -0.57
ACTB-213ENST00000493945 THAP8Q8NA92 274 aa11.51□□□□□ -0.57
ACTB-213ENST00000493945 BPIFCQ8NFQ6 507 aa11.51□□□□□ -0.57
ACTB-213ENST00000493945 ELOVL1Q9BW60 279 aa11.51□□□□□ -0.57
ACTB-213ENST00000493945 GPR61Q9BZJ8 451 aa11.51□□□□□ -0.57
ACTB-213ENST00000493945 UFC1Q9Y3C8 167 aa11.51□□□□□ -0.57
ACTB-213ENST00000493945 PPP5D1E7EU14 171 aa11.5□□□□□ -0.57
ACTB-213ENST00000493945 SMLR1H3BR10 107 aa11.5□□□□□ -0.57
ACTB-213ENST00000493945 BMPR1BO00238 502 aa11.5□□□□□ -0.57
ACTB-213ENST00000493945 YIF1AO95070 293 aa11.5□□□□□ -0.57
ACTB-213ENST00000493945 TOMM40O96008 361 aa11.5□□□□□ -0.57
ACTB-213ENST00000493945 IGLC1P0CG04 106 aa11.5□□□□□ -0.57
ACTB-213ENST00000493945 RD3LP0DJH9 198 aa11.5□□□□□ -0.57
ACTB-213ENST00000493945 FGF7P21781 194 aa11.5□□□□□ -0.57
ACTB-213ENST00000493945 FHL3Q13643 280 aa11.5□□□□□ -0.57
ACTB-213ENST00000493945 DEFB136Q30KP8 78 aa11.5□□□□□ -0.57
ACTB-213ENST00000493945 TREML4Q6UXN2 200 aa11.5□□□□□ -0.57
ACTB-213ENST00000493945 GPHB5Q86YW7 130 aa11.5□□□□□ -0.57
ACTB-213ENST00000493945 RAX2Q96IS3 184 aa11.5□□□□□ -0.57
ACTB-213ENST00000493945 MDFIQ99750 246 aa11.5□□□□□ -0.57
ACTB-213ENST00000493945 MCRIP2Q9BUT9 160 aaKnown RBP11.5□□□□□ -0.57
ACTB-213ENST00000493945 FBXL17Q9UF56 701 aa11.5□□□□□ -0.57
ACTB-213ENST00000493945 JTBO76095 146 aa11.49□□□□□ -0.57
ACTB-213ENST00000493945 CTSGP08311 255 aa11.49□□□□□ -0.57
ACTB-213ENST00000493945 Q5BKY6 102 aa11.49□□□□□ -0.57
ACTB-213ENST00000493945 PXDC1Q5TGL8 231 aa11.49□□□□□ -0.57
ACTB-213ENST00000493945 BTNL8Q6UX41 500 aa11.49□□□□□ -0.57
ACTB-213ENST00000493945 REC114Q7Z4M0 266 aa11.49□□□□□ -0.57
ACTB-213ENST00000493945 HAPLN4Q86UW8 402 aa11.49□□□□□ -0.57
ACTB-213ENST00000493945 OR51G1Q8NGK1 321 aa11.49□□□□□ -0.57
ACTB-213ENST00000493945 ARPC5LQ9BPX5 153 aa11.49□□□□□ -0.57
ACTB-213ENST00000493945 PARD6GQ9BYG4 376 aaPredicted RBP11.49□□□□□ -0.57
ACTB-213ENST00000493945 SMIM3Q9BZL3 60 aa11.49□□□□□ -0.57
ACTB-213ENST00000493945 WDR83OSQ9Y284 106 aa11.49□□□□□ -0.57
ACTB-213ENST00000493945 ZNF320A2RRD8 509 aa11.48□□□□□ -0.57
ACTB-213ENST00000493945 RNF222A6NCQ9 220 aa11.48□□□□□ -0.57
ACTB-213ENST00000493945 ADARB2-AS1A8MUL3 147 aa11.48□□□□□ -0.57
ACTB-213ENST00000493945 G3V3Q6 166 aa11.48□□□□□ -0.57
ACTB-213ENST00000493945 LGALS9O00182 355 aa11.48□□□□□ -0.57
ACTB-213ENST00000493945 CAMLGP49069 296 aa11.48□□□□□ -0.57
ACTB-213ENST00000493945 ELLP55199 621 aaPredicted RBP11.48□□□□□ -0.57
ACTB-213ENST00000493945 ARL16Q0P5N6 197 aa11.48□□□□□ -0.57
ACTB-213ENST00000493945 MLANAQ16655 118 aa11.48□□□□□ -0.57
ACTB-213ENST00000493945 TIGITQ495A1 244 aa11.48□□□□□ -0.57
ACTB-213ENST00000493945 Q6ZRG5 221 aa11.48□□□□□ -0.57
ACTB-213ENST00000493945 CYP2G1PQ6ZSU1 146 aa11.48□□□□□ -0.57
ACTB-213ENST00000493945 C18orf65Q6ZTR6 163 aa11.48□□□□□ -0.57
ACTB-213ENST00000493945 KCNRGQ8N5I3 272 aa11.48□□□□□ -0.57
ACTB-213ENST00000493945 MARC2Q969Z3 335 aa11.48□□□□□ -0.57
ACTB-213ENST00000493945 C20orf24Q9BUV8 137 aa11.48□□□□□ -0.57
ACTB-213ENST00000493945 ARL6Q9H0F7 186 aa11.48□□□□□ -0.57
ACTB-213ENST00000493945 TMEM231Q9H6L2 316 aa11.48□□□□□ -0.57
ACTB-213ENST00000493945 DAZ1Q9NQZ3 744 aaKnown RBP11.48□□□□□ -0.57
ACTB-213ENST00000493945 FBN1P35555 2871 aaKnown RBP11.48□□□□□ -0.57
ACTB-213ENST00000493945 F8W735 103 aaPredicted RBP11.47□□□□□ -0.57
ACTB-213ENST00000493945 OVOL1O14753 267 aa11.47□□□□□ -0.57
ACTB-213ENST00000493945 OR2C1O95371 312 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms