RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 TMEM133Q9H2Q1 129 aa11.14□□□□□ -0.63
VCP-207ENST00000493886 COL6A6A6NMZ7 2263 aa11.13□□□□□ -0.63
VCP-207ENST00000493886 PDE6DO43924 150 aa11.13□□□□□ -0.63
VCP-207ENST00000493886 FSTL3O95633 263 aa11.13□□□□□ -0.63
VCP-207ENST00000493886 SRP14P37108 136 aaKnown RBP11.13□□□□□ -0.63
VCP-207ENST00000493886 TEPPQ6URK8 271 aa11.13□□□□□ -0.63
VCP-207ENST00000493886 ZNF841Q6ZN19 808 aa11.13□□□□□ -0.63
VCP-207ENST00000493886 TMEM144Q7Z5S9 345 aa11.13□□□□□ -0.63
VCP-207ENST00000493886 ORAOV1Q8WV07 137 aa11.13□□□□□ -0.63
VCP-207ENST00000493886 RAB1CQ92928 201 aa11.13□□□□□ -0.63
VCP-207ENST00000493886 SFRP2Q96HF1 295 aa11.13□□□□□ -0.63
VCP-207ENST00000493886 TBL2Q9Y4P3 447 aaKnown RBP11.13□□□□□ -0.63
VCP-207ENST00000493886 LY6DQ14210 128 aa11.13□□□□□ -0.63
VCP-207ENST00000493886 ERASQ7Z444 233 aa11.13□□□□□ -0.63
VCP-207ENST00000493886 STPG4Q8N801 248 aa11.13□□□□□ -0.63
VCP-207ENST00000493886 KCNIP2Q9NS61 270 aa11.13□□□□□ -0.63
VCP-207ENST00000493886 POLR3KQ9Y2Y1 108 aaPredicted RBP11.13□□□□□ -0.63
VCP-207ENST00000493886 WASHC3Q9Y3C0 194 aa11.13□□□□□ -0.63
VCP-207ENST00000493886 MALRD1Q5VYJ5 2156 aa11.13□□□□□ -0.63
VCP-207ENST00000493886 A0A1B0GW15 77 aa11.12□□□□□ -0.63
VCP-207ENST00000493886 OR5G3P0C626 314 aa11.12□□□□□ -0.63
VCP-207ENST00000493886 CBLN1P23435 193 aa11.12□□□□□ -0.63
VCP-207ENST00000493886 RPL8P62917 257 aaKnown RBP11.12□□□□□ -0.63
VCP-207ENST00000493886 FBLN7Q53RD9 439 aa11.12□□□□□ -0.63
VCP-207ENST00000493886 OCC1Q8TAD7 63 aa11.12□□□□□ -0.63
VCP-207ENST00000493886 ACY3Q96HD9 319 aa11.12□□□□□ -0.63
VCP-207ENST00000493886 COMMD5Q9GZQ3 224 aa11.12□□□□□ -0.63
VCP-207ENST00000493886 ZZEF1O43149 2961 aa11.12□□□□□ -0.63
VCP-207ENST00000493886 FRMD6-AS1P0C7T7 363 aa11.12□□□□□ -0.63
VCP-207ENST00000493886 USF1P22415 310 aaPredicted RBP11.12□□□□□ -0.63
VCP-207ENST00000493886 GATA2P23769 480 aaPredicted RBP11.12□□□□□ -0.63
VCP-207ENST00000493886 LGALS7P47929 136 aa11.12□□□□□ -0.63
VCP-207ENST00000493886 HLA-DRB5Q30154 266 aa11.12□□□□□ -0.63
VCP-207ENST00000493886 STPG3Q8N7X2 389 aa11.12□□□□□ -0.63
VCP-207ENST00000493886 TMEM18Q96B42 140 aa11.12□□□□□ -0.63
VCP-207ENST00000493886 FNDC10F2Z333 226 aa11.12□□□□□ -0.63
VCP-207ENST00000493886 SPINK4O60575 86 aa11.12□□□□□ -0.63
VCP-207ENST00000493886 GCGP01275 180 aa11.12□□□□□ -0.63
VCP-207ENST00000493886 STAG3L2P0CL84 134 aa11.12□□□□□ -0.63
VCP-207ENST00000493886 IGFBP2P18065 325 aa11.12□□□□□ -0.63
VCP-207ENST00000493886 MMDQ15546 238 aa11.12□□□□□ -0.63
VCP-207ENST00000493886 TMEM249Q2WGJ8 235 aa11.12□□□□□ -0.63
VCP-207ENST00000493886 TDRG1Q3Y452 100 aa11.12□□□□□ -0.63
VCP-207ENST00000493886 C2orf83Q53S99 150 aa11.12□□□□□ -0.63
VCP-207ENST00000493886 GBGT1Q8N5D6 347 aa11.12□□□□□ -0.63
VCP-207ENST00000493886 OR4P4Q8NGL7 312 aa11.12□□□□□ -0.63
VCP-207ENST00000493886 OR1L8Q8NGR8 309 aa11.12□□□□□ -0.63
VCP-207ENST00000493886 VSTM2AQ8TAG5 236 aa11.12□□□□□ -0.63
VCP-207ENST00000493886 TMEM167AQ8TBQ9 72 aa11.12□□□□□ -0.63
VCP-207ENST00000493886 NDUFA4L2Q9NRX3 87 aa11.12□□□□□ -0.63
VCP-207ENST00000493886 ADMP35318 185 aa11.11□□□□□ -0.63
VCP-207ENST00000493886 ATP5IP56385 69 aaPredicted RBP11.11□□□□□ -0.63
VCP-207ENST00000493886 RPL15P61313 204 aaKnown RBP11.11□□□□□ -0.63
VCP-207ENST00000493886 RAB31Q13636 194 aa11.11□□□□□ -0.63
VCP-207ENST00000493886 COA6Q5JTJ3 125 aaKnown RBP11.11□□□□□ -0.63
VCP-207ENST00000493886 PRR27Q6MZM9 219 aa11.11□□□□□ -0.63
VCP-207ENST00000493886 BOD1L2Q8IYS8 172 aa11.11□□□□□ -0.63
VCP-207ENST00000493886 OR4A5Q8NH83 315 aa11.11□□□□□ -0.63
VCP-207ENST00000493886 RNASEH2CQ8TDP1 164 aaKnown RBP11.11□□□□□ -0.63
VCP-207ENST00000493886 KIR2DL5BA0A0G2JN68 375 aa11.11□□□□□ -0.63
VCP-207ENST00000493886 KIR2DL5BA0A0G2JPC4 375 aa11.11□□□□□ -0.63
VCP-207ENST00000493886 IGLV2-23P01705 113 aa11.11□□□□□ -0.63
VCP-207ENST00000493886 RNASE2P10153 161 aaKnown RBP11.11□□□□□ -0.63
VCP-207ENST00000493886 RAB9AP51151 201 aa11.11□□□□□ -0.63
VCP-207ENST00000493886 DLX1P56177 255 aa11.11□□□□□ -0.63
VCP-207ENST00000493886 IQCJQ1A5X6 159 aa11.11□□□□□ -0.63
VCP-207ENST00000493886 ASPHD1Q5U4P2 390 aa11.11□□□□□ -0.63
VCP-207ENST00000493886 KIR2DL5AQ8N109 375 aa11.11□□□□□ -0.63
VCP-207ENST00000493886 RAB1BQ9H0U4 201 aa11.11□□□□□ -0.63
VCP-207ENST00000493886 IGHV2-26A0A0B4J1V2 119 aa11.1□□□□□ -0.63
VCP-207ENST00000493886 TYMSP04818 313 aa11.1□□□□□ -0.63
VCP-207ENST00000493886 UNQ5815/PRO19632Q6UWF5 114 aa11.1□□□□□ -0.63
VCP-207ENST00000493886 PRORYQ9H606 182 aa11.1□□□□□ -0.63
VCP-207ENST00000493886 RELNP78509 3460 aa11.1□□□□□ -0.63
VCP-207ENST00000493886 E7EUB6 86 aa11.1□□□□□ -0.63
VCP-207ENST00000493886 K7EN84 100 aa11.1□□□□□ -0.63
VCP-207ENST00000493886 K7ERU9 68 aa11.1□□□□□ -0.63
VCP-207ENST00000493886 LY6HO94772 140 aa11.1□□□□□ -0.63
VCP-207ENST00000493886 CXorf1O96002 111 aa11.1□□□□□ -0.63
VCP-207ENST00000493886 CRYGCP07315 174 aa11.1□□□□□ -0.63
VCP-207ENST00000493886 GCHFRP30047 84 aa11.1□□□□□ -0.63
VCP-207ENST00000493886 ZNF90Q03938 601 aa11.1□□□□□ -0.63
VCP-207ENST00000493886 CHD8Q9HCK8 2581 aa11.09□□□□□ -0.63
VCP-207ENST00000493886 PPIAL4CA0A0B4J2A2 164 aa11.09□□□□□ -0.63
VCP-207ENST00000493886 PPIAL4GP0DN37 164 aa11.09□□□□□ -0.63
VCP-207ENST00000493886 PDLIM4P50479 330 aa11.09□□□□□ -0.63
VCP-207ENST00000493886 SLC35B1P78383 322 aa11.09□□□□□ -0.63
VCP-207ENST00000493886 ERHP84090 104 aaKnown RBP11.09□□□□□ -0.63
VCP-207ENST00000493886 PRB3Q04118 309 aaPredicted RBP11.09□□□□□ -0.63
VCP-207ENST00000493886 MIR17HGQ75NE6 70 aa11.09□□□□□ -0.63
VCP-207ENST00000493886 OR8B3Q8NGG8 313 aa11.09□□□□□ -0.63
VCP-207ENST00000493886 OR8B2Q96RD0 313 aa11.09□□□□□ -0.63
VCP-207ENST00000493886 NCOR2Q9Y618 2525 aa11.09□□□□□ -0.63
VCP-207ENST00000493886 IGHV3-72A0A0B4J1Y9 119 aa11.09□□□□□ -0.63
VCP-207ENST00000493886 ZNF705FA8MVS1 300 aaPredicted RBP11.09□□□□□ -0.63
VCP-207ENST00000493886 IGLV1-47P01700 117 aa11.09□□□□□ -0.63
VCP-207ENST00000493886 ZNF705DP0CH99 300 aaPredicted RBP11.09□□□□□ -0.63
VCP-207ENST00000493886 ZNF705BP0CI00 300 aaPredicted RBP11.09□□□□□ -0.63
VCP-207ENST00000493886 VMA21Q3ZAQ7 101 aa11.09□□□□□ -0.63
VCP-207ENST00000493886 OR10G8Q8NGN5 311 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms