RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 TRAV2A0A0B4J234 112 aa10.71□□□□□ -0.69
ATG4B-223ENST00000493618 KNCNA6PVL3 124 aa10.71□□□□□ -0.69
ATG4B-223ENST00000493618 K7EQG2 157 aa10.71□□□□□ -0.69
ATG4B-223ENST00000493618 SCGB2A1O75556 95 aa10.71□□□□□ -0.69
ATG4B-223ENST00000493618 ZNF688P0C7X2 276 aa10.71□□□□□ -0.69
ATG4B-223ENST00000493618 AKR1C4P17516 323 aa10.71□□□□□ -0.69
ATG4B-223ENST00000493618 OR10J1P30954 320 aa10.71□□□□□ -0.69
ATG4B-223ENST00000493618 TMEM187Q14656 261 aa10.71□□□□□ -0.69
ATG4B-223ENST00000493618 C2orf83Q53S99 150 aa10.71□□□□□ -0.69
ATG4B-223ENST00000493618 OR1S2Q8NGQ3 325 aa10.71□□□□□ -0.69
ATG4B-223ENST00000493618 NARS2Q96I59 477 aaKnown RBP10.71□□□□□ -0.69
ATG4B-223ENST00000493618 FBXL17Q9UF56 701 aa10.71□□□□□ -0.69
ATG4B-223ENST00000493618 KLK5Q9Y337 293 aaPredicted RBP10.71□□□□□ -0.69
ATG4B-223ENST00000493618 TMEM56-RWDD3S4R434 201 aa10.71□□□□□ -0.69
ATG4B-223ENST00000493618 TRAV30A0A087WSZ9 112 aa10.7□□□□□ -0.7
ATG4B-223ENST00000493618 GSTZ1O43708 216 aaPredicted RBP10.7□□□□□ -0.7
ATG4B-223ENST00000493618 IGLC1P0CG04 106 aa10.7□□□□□ -0.7
ATG4B-223ENST00000493618 SULT1A3P0DMM9 295 aa10.7□□□□□ -0.7
ATG4B-223ENST00000493618 SULT1A4P0DMN0 295 aa10.7□□□□□ -0.7
ATG4B-223ENST00000493618 ATF4P18848 351 aaPredicted RBP10.7□□□□□ -0.7
ATG4B-223ENST00000493618 TNFSF8P32971 234 aa10.7□□□□□ -0.7
ATG4B-223ENST00000493618 TMBIM6P55061 237 aa10.7□□□□□ -0.7
ATG4B-223ENST00000493618 RNASEH2CQ8TDP1 164 aaKnown RBP10.7□□□□□ -0.7
ATG4B-223ENST00000493618 ACY3Q96HD9 319 aa10.7□□□□□ -0.7
ATG4B-223ENST00000493618 KMT2AQ03164 3969 aa10.69□□□□□ -0.7
ATG4B-223ENST00000493618 H3BMQ9 156 aa10.69□□□□□ -0.7
ATG4B-223ENST00000493618 NOL3O60936 208 aaKnown RBP10.69□□□□□ -0.7
ATG4B-223ENST00000493618 HNRNPCP07910 306 aaKnown RBP eCLIP10.69□□□□□ -0.77e-14■■□□□ 12
ATG4B-223ENST00000493618 SLC25A4P12235 298 aa10.69□□□□□ -0.7
ATG4B-223ENST00000493618 NPY1RP25929 384 aa10.69□□□□□ -0.7
ATG4B-223ENST00000493618 DHRS2Q13268 280 aa10.69□□□□□ -0.7
ATG4B-223ENST00000493618 LYZL2Q7Z4W2 148 aa10.69□□□□□ -0.7
ATG4B-223ENST00000493618 C11orf45Q8TAV5 145 aa10.69□□□□□ -0.7
ATG4B-223ENST00000493618 Q8WTZ3 238 aa10.69□□□□□ -0.7
ATG4B-223ENST00000493618 NPIPB3Q92617 1050 aa10.69□□□□□ -0.7
ATG4B-223ENST00000493618 GRAMD2BQ96HH9 432 aa10.69□□□□□ -0.7
ATG4B-223ENST00000493618 SLIRPQ9GZT3 109 aaKnown RBP10.69□□□□□ -0.7
ATG4B-223ENST00000493618 RBKSQ9H477 322 aa10.69□□□□□ -0.7
ATG4B-223ENST00000493618 RABL2AQ9UBK7 228 aaPredicted RBP10.69□□□□□ -0.7
ATG4B-223ENST00000493618 RSL24D1Q9UHA3 163 aaKnown RBP10.69□□□□□ -0.7
ATG4B-223ENST00000493618 SCP2D1Q9UJQ7 156 aa10.69□□□□□ -0.7
ATG4B-223ENST00000493618 RABL2BQ9UNT1 228 aa10.69□□□□□ -0.7
ATG4B-223ENST00000493618 KCNIP3Q9Y2W7 256 aa10.69□□□□□ -0.7
ATG4B-223ENST00000493618 FRAS1Q86XX4 4008 aa10.69□□□□□ -0.7
ATG4B-223ENST00000493618 FABP12A6NFH5 140 aa10.68□□□□□ -0.7
ATG4B-223ENST00000493618 IFNA10P01566 189 aa10.68□□□□□ -0.7
ATG4B-223ENST00000493618 IL4P05112 153 aa10.68□□□□□ -0.7
ATG4B-223ENST00000493618 C4BPBP20851 252 aa10.68□□□□□ -0.7
ATG4B-223ENST00000493618 SUPT4H1P63272 117 aaKnown RBP10.68□□□□□ -0.7
ATG4B-223ENST00000493618 USF2Q15853 346 aaPredicted RBP10.68□□□□□ -0.7
ATG4B-223ENST00000493618 NMSQ5H8A3 153 aa10.68□□□□□ -0.7
ATG4B-223ENST00000493618 ACTL10Q5JWF8 245 aa10.68□□□□□ -0.7
ATG4B-223ENST00000493618 C16orf54Q6UWD8 224 aa10.68□□□□□ -0.7
ATG4B-223ENST00000493618 TRPT1Q86TN4 253 aaKnown RBP10.68□□□□□ -0.7
ATG4B-223ENST00000493618 MCFD2Q8NI22 146 aa10.68□□□□□ -0.7
ATG4B-223ENST00000493618 DCANP1Q8TF63 244 aa10.68□□□□□ -0.7
ATG4B-223ENST00000493618 IL22RA2Q969J5 263 aa10.68□□□□□ -0.7
ATG4B-223ENST00000493618 BCL7BQ9BQE9 202 aa10.68□□□□□ -0.7
ATG4B-223ENST00000493618 C11orf68Q9H3H3 251 aaKnown RBP10.68□□□□□ -0.7
ATG4B-223ENST00000493618 U3KQE9 123 aa10.68□□□□□ -0.7
ATG4B-223ENST00000493618 GIG44P09565 113 aaPredicted RBP10.67□□□□□ -0.7
ATG4B-223ENST00000493618 YPEL3P61236 119 aaPredicted RBP10.67□□□□□ -0.7
ATG4B-223ENST00000493618 SMCO1Q147U7 214 aa10.67□□□□□ -0.7
ATG4B-223ENST00000493618 ETFRF1Q6IPR1 90 aa10.67□□□□□ -0.7
ATG4B-223ENST00000493618 RPP25LQ8N5L8 163 aaKnown RBP10.67□□□□□ -0.7
ATG4B-223ENST00000493618 DTD1Q8TEA8 209 aa10.67□□□□□ -0.7
ATG4B-223ENST00000493618 GLMPQ8WWB7 406 aa10.67□□□□□ -0.7
ATG4B-223ENST00000493618 SCGB3A2Q96PL1 93 aa10.67□□□□□ -0.7
ATG4B-223ENST00000493618 SOSTQ9BQB4 213 aa10.67□□□□□ -0.7
ATG4B-223ENST00000493618 KRTAP17-1Q9BYP8 105 aa10.67□□□□□ -0.7
ATG4B-223ENST00000493618 CLEC5AQ9NY25 188 aa10.67□□□□□ -0.7
ATG4B-223ENST00000493618 VPS13DQ5THJ4 4388 aa10.67□□□□□ -0.7
ATG4B-223ENST00000493618 DEDDO75618 318 aa10.66□□□□□ -0.7
ATG4B-223ENST00000493618 CCR6P51684 374 aa10.66□□□□□ -0.7
ATG4B-223ENST00000493618 PSMG4Q5JS54 123 aa10.66□□□□□ -0.7
ATG4B-223ENST00000493618 TMED4Q7Z7H5 227 aa10.66□□□□□ -0.7
ATG4B-223ENST00000493618 LGI3Q8N145 548 aa10.66□□□□□ -0.7
ATG4B-223ENST00000493618 OR51G1Q8NGK1 321 aa10.66□□□□□ -0.7
ATG4B-223ENST00000493618 OR1S1Q8NH92 325 aa10.66□□□□□ -0.7
ATG4B-223ENST00000493618 HSPB7Q9UBY9 170 aa10.66□□□□□ -0.7
ATG4B-223ENST00000493618 DNAH10Q8IVF4 4471 aa10.65□□□□□ -0.7
ATG4B-223ENST00000493618 A0A0B4J2A0 478 aa10.65□□□□□ -0.7
ATG4B-223ENST00000493618 HELTA6NFD8 242 aa10.65□□□□□ -0.7
ATG4B-223ENST00000493618 TOMM40O96008 361 aa10.65□□□□□ -0.7
ATG4B-223ENST00000493618 IFNA4P05014 189 aa10.65□□□□□ -0.7
ATG4B-223ENST00000493618 RD3LP0DJH9 198 aa10.65□□□□□ -0.7
ATG4B-223ENST00000493618 PSG1P11464 419 aa10.65□□□□□ -0.7
ATG4B-223ENST00000493618 EIF2B2P49770 351 aaKnown RBP10.65□□□□□ -0.7
ATG4B-223ENST00000493618 KLF9Q13886 244 aaPredicted RBP10.65□□□□□ -0.7
ATG4B-223ENST00000493618 PYDC2Q56P42 97 aa10.65□□□□□ -0.7
ATG4B-223ENST00000493618 GSG1LQ6UXU4 331 aa10.65□□□□□ -0.7
ATG4B-223ENST00000493618 NOXA1Q86UR1 476 aa10.65□□□□□ -0.7
ATG4B-223ENST00000493618 Q8NAQ8 132 aa10.65□□□□□ -0.7
ATG4B-223ENST00000493618 MFFQ9GZY8 342 aa10.65□□□□□ -0.7
ATG4B-223ENST00000493618 SHPKQ9UHJ6 478 aa10.65□□□□□ -0.7
ATG4B-223ENST00000493618 DNAH6Q9C0G6 4158 aa10.64□□□□□ -0.71
ATG4B-223ENST00000493618 IGHV4-28A0A0C4DH34 117 aa10.64□□□□□ -0.71
ATG4B-223ENST00000493618 RBMY1A1P0DJD3 496 aaKnown RBP10.64□□□□□ -0.71
ATG4B-223ENST00000493618 RBMY1CP0DJD4 496 aa10.64□□□□□ -0.71
ATG4B-223ENST00000493618 SPP1P10451 314 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms