RNA–Protein interactions for RNA: ENST00000493475.2

COL6A3-213, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-213ENST00000493475 APOHP02749 345 aaPredicted RBP8.44□□□□□ -1.06
COL6A3-213ENST00000493475 CD3DP04234 171 aa8.44□□□□□ -1.06
COL6A3-213ENST00000493475 FABP1P07148 127 aa8.44□□□□□ -1.06
COL6A3-213ENST00000493475 ZNF182P17025 639 aaPredicted RBP8.44□□□□□ -1.06
COL6A3-213ENST00000493475 UCP1P25874 307 aa8.44□□□□□ -1.06
COL6A3-213ENST00000493475 HLA-DMBP28068 263 aa8.44□□□□□ -1.06
COL6A3-213ENST00000493475 VBP1P61758 197 aa8.44□□□□□ -1.06
COL6A3-213ENST00000493475 NCS1P62166 190 aa8.44□□□□□ -1.06
COL6A3-213ENST00000493475 SSBP1Q04837 148 aaKnown RBP8.44□□□□□ -1.06
COL6A3-213ENST00000493475 SURF2Q15527 256 aaPredicted RBP8.44□□□□□ -1.06
COL6A3-213ENST00000493475 RNASE12Q5GAN4 147 aaKnown RBP8.44□□□□□ -1.06
COL6A3-213ENST00000493475 PVRIGQ6DKI7 326 aa8.44□□□□□ -1.06
COL6A3-213ENST00000493475 LINC00336Q6ZUF6 198 aa8.44□□□□□ -1.06
COL6A3-213ENST00000493475 LHFPL1Q86WI0 220 aa8.44□□□□□ -1.06
COL6A3-213ENST00000493475 Q8NAQ8 132 aa8.44□□□□□ -1.06
COL6A3-213ENST00000493475 TMEM229BQ8NBD8 167 aa8.44□□□□□ -1.06
COL6A3-213ENST00000493475 SLC24A4Q8NFF2 622 aa8.44□□□□□ -1.06
COL6A3-213ENST00000493475 RBPMSQ93062 196 aaKnown RBP8.44□□□□□ -1.06
COL6A3-213ENST00000493475 FUNDC2Q9BWH2 189 aa8.44□□□□□ -1.06
COL6A3-213ENST00000493475 SEPSECSQ9HD40 501 aaKnown RBP8.44□□□□□ -1.06
COL6A3-213ENST00000493475 MTFP1Q9UDX5 166 aa8.44□□□□□ -1.06
COL6A3-213ENST00000493475 TEX48A0A1B0GUV7 120 aa8.43□□□□□ -1.06
COL6A3-213ENST00000493475 ZNF705EA8MWA4 302 aaPredicted RBP8.43□□□□□ -1.06
COL6A3-213ENST00000493475 P0DMU3 169 aa8.43□□□□□ -1.06
COL6A3-213ENST00000493475 FAM231AP0DMU4 169 aa8.43□□□□□ -1.06
COL6A3-213ENST00000493475 FAM231CP0DMU5 169 aa8.43□□□□□ -1.06
COL6A3-213ENST00000493475 OR10J1P30954 320 aa8.43□□□□□ -1.06
COL6A3-213ENST00000493475 YPEL3P61236 119 aaPredicted RBP8.43□□□□□ -1.06
COL6A3-213ENST00000493475 IZUMO4Q1ZYL8 232 aa8.43□□□□□ -1.06
COL6A3-213ENST00000493475 PSMG4Q5JS54 123 aa8.43□□□□□ -1.06
COL6A3-213ENST00000493475 STEAP1BQ6NZ63 245 aa8.43□□□□□ -1.06
COL6A3-213ENST00000493475 OR13C8Q8NGS7 320 aa8.43□□□□□ -1.06
COL6A3-213ENST00000493475 SCGB3A2Q96PL1 93 aa8.43□□□□□ -1.06
COL6A3-213ENST00000493475 RNF126Q9BV68 326 aa8.43□□□□□ -1.06
COL6A3-213ENST00000493475 TMEM222Q9H0R3 208 aa8.43□□□□□ -1.06
COL6A3-213ENST00000493475 NRN1Q9NPD7 142 aa8.43□□□□□ -1.06
COL6A3-213ENST00000493475 RABL2AQ9UBK7 228 aaPredicted RBP8.43□□□□□ -1.06
COL6A3-213ENST00000493475 KLK11Q9UBX7 282 aa8.43□□□□□ -1.06
COL6A3-213ENST00000493475 RABL2BQ9UNT1 228 aa8.43□□□□□ -1.06
COL6A3-213ENST00000493475 KCNIP3Q9Y2W7 256 aa8.43□□□□□ -1.06
COL6A3-213ENST00000493475 TMEM189A5PLL7 270 aa8.42□□□□□ -1.06
COL6A3-213ENST00000493475 RGS5O15539 181 aa8.42□□□□□ -1.06
COL6A3-213ENST00000493475 CDS2O95674 445 aa8.42□□□□□ -1.06
COL6A3-213ENST00000493475 IL4P05112 153 aa8.42□□□□□ -1.06
COL6A3-213ENST00000493475 P0C879 139 aa8.42□□□□□ -1.06
COL6A3-213ENST00000493475 RD3LP0DJH9 198 aa8.42□□□□□ -1.06
COL6A3-213ENST00000493475 ID1P41134 155 aa8.42□□□□□ -1.06
COL6A3-213ENST00000493475 RND2P52198 227 aa8.42□□□□□ -1.06
COL6A3-213ENST00000493475 SP6Q3SY56 376 aa8.42□□□□□ -1.06
COL6A3-213ENST00000493475 TIGITQ495A1 244 aa8.42□□□□□ -1.06
COL6A3-213ENST00000493475 C2orf83Q53S99 150 aa8.42□□□□□ -1.06
COL6A3-213ENST00000493475 SAMD13Q5VXD3 122 aa8.42□□□□□ -1.06
COL6A3-213ENST00000493475 LILRB2Q8N423 598 aa8.42□□□□□ -1.06
COL6A3-213ENST00000493475 OR52I2Q8NH67 350 aa8.42□□□□□ -1.06
COL6A3-213ENST00000493475 DCANP1Q8TF63 244 aa8.42□□□□□ -1.06
COL6A3-213ENST00000493475 PRRT1Q99946 306 aa8.42□□□□□ -1.06
COL6A3-213ENST00000493475 NDUFAF3Q9BU61 184 aa8.42□□□□□ -1.06
COL6A3-213ENST00000493475 IGHV4-4A0A075B6R2 117 aa8.41□□□□□ -1.06
COL6A3-213ENST00000493475 DEFB131BA0A096LNP1 70 aa8.41□□□□□ -1.06
COL6A3-213ENST00000493475 KNCNA6PVL3 124 aa8.41□□□□□ -1.06
COL6A3-213ENST00000493475 GABARAPH6UMI1 98 aa8.41□□□□□ -1.06
COL6A3-213ENST00000493475 GABARAPO95166 117 aa8.41□□□□□ -1.06
COL6A3-213ENST00000493475 IFNA10P01566 189 aa8.41□□□□□ -1.06
COL6A3-213ENST00000493475 IGKV1-17P01599 117 aa8.41□□□□□ -1.06
COL6A3-213ENST00000493475 CD74P04233 296 aa8.41□□□□□ -1.06
COL6A3-213ENST00000493475 S100A7P31151 101 aa8.41□□□□□ -1.06
COL6A3-213ENST00000493475 ATP5IP56385 69 aaPredicted RBP8.41□□□□□ -1.06
COL6A3-213ENST00000493475 BSXQ3C1V8 233 aa8.41□□□□□ -1.06
COL6A3-213ENST00000493475 GPR107Q5VW38 600 aa8.41□□□□□ -1.06
COL6A3-213ENST00000493475 SIGLEC15Q6ZMC9 328 aa8.41□□□□□ -1.06
COL6A3-213ENST00000493475 Q6ZTC4 211 aa8.41□□□□□ -1.06
COL6A3-213ENST00000493475 FAM24BQ8N5W8 94 aa8.41□□□□□ -1.06
COL6A3-213ENST00000493475 MARCH1Q8TCQ1 289 aa8.41□□□□□ -1.06
COL6A3-213ENST00000493475 RAB40CQ96S21 281 aa8.41□□□□□ -1.06
COL6A3-213ENST00000493475 KRTAP9-9Q9BYP9 154 aa8.41□□□□□ -1.06
COL6A3-213ENST00000493475 KRTAP9-4Q9BYQ2 154 aa8.41□□□□□ -1.06
COL6A3-213ENST00000493475 FNDC4Q9H6D8 234 aaPredicted RBP8.41□□□□□ -1.06
COL6A3-213ENST00000493475 NAA60Q9H7X0 242 aa8.41□□□□□ -1.06
COL6A3-213ENST00000493475 CACNG5Q9UF02 275 aa8.41□□□□□ -1.06
COL6A3-213ENST00000493475 APLNQ9ULZ1 77 aa8.41□□□□□ -1.06
COL6A3-213ENST00000493475 SMIM9A6NGZ8 99 aa8.4□□□□□ -1.06
COL6A3-213ENST00000493475 AMBPP02760 352 aa8.4□□□□□ -1.06
COL6A3-213ENST00000493475 OR5AC1P0C628 307 aa8.4□□□□□ -1.06
COL6A3-213ENST00000493475 IGLC1P0CG04 106 aa8.4□□□□□ -1.06
COL6A3-213ENST00000493475 SULT1A3P0DMM9 295 aa8.4□□□□□ -1.06
COL6A3-213ENST00000493475 SULT1A4P0DMN0 295 aa8.4□□□□□ -1.06
COL6A3-213ENST00000493475 ANXA3P12429 323 aa8.4□□□□□ -1.06
COL6A3-213ENST00000493475 SRPXP78539 464 aa8.4□□□□□ -1.06
COL6A3-213ENST00000493475 AARDQ4LEZ3 155 aa8.4□□□□□ -1.06
COL6A3-213ENST00000493475 TMEM268Q5VZI3 342 aa8.4□□□□□ -1.06
COL6A3-213ENST00000493475 PRSS54Q6PEW0 395 aa8.4□□□□□ -1.06
COL6A3-213ENST00000493475 C16orf54Q6UWD8 224 aa8.4□□□□□ -1.06
COL6A3-213ENST00000493475 COQ8AQ8NI60 647 aa8.4□□□□□ -1.06
COL6A3-213ENST00000493475 IL22RA2Q969J5 263 aa8.4□□□□□ -1.06
COL6A3-213ENST00000493475 ACY3Q96HD9 319 aa8.4□□□□□ -1.06
COL6A3-213ENST00000493475 SCP2D1Q9UJQ7 156 aa8.4□□□□□ -1.06
COL6A3-213ENST00000493475 U3KQ87 197 aa8.4□□□□□ -1.06
COL6A3-213ENST00000493475 FAM90A26D6RGX4 464 aa8.39□□□□□ -1.07
COL6A3-213ENST00000493475 TOMM40O96008 361 aa8.39□□□□□ -1.07
COL6A3-213ENST00000493475 IFNA21P01568 189 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms