RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 UBE2E2Q96LR5 201 aa10.37□□□□□ -0.75
MSH6-208ENST00000493177 GGACTQ9BVM4 153 aa10.37□□□□□ -0.75
MSH6-208ENST00000493177 UQCC1Q9NVA1 299 aa10.37□□□□□ -0.75
MSH6-208ENST00000493177 MRPL36Q9P0J6 103 aaKnown RBP10.37□□□□□ -0.75
MSH6-208ENST00000493177 A0A0D9SG52 128 aa10.36□□□□□ -0.75
MSH6-208ENST00000493177 UBE2L5PA0A1B0GUS4 154 aa10.36□□□□□ -0.75
MSH6-208ENST00000493177 OR2T8A6NH00 312 aa10.36□□□□□ -0.75
MSH6-208ENST00000493177 BOLA2-SMG1P6H3BVE0 249 aa10.36□□□□□ -0.75
MSH6-208ENST00000493177 SCGB2A1O75556 95 aa10.36□□□□□ -0.75
MSH6-208ENST00000493177 DFFBO76075 338 aa10.36□□□□□ -0.75
MSH6-208ENST00000493177 HNRNPCP07910 306 aaKnown RBP eCLIP10.36□□□□□ -0.75
MSH6-208ENST00000493177 ZNF345Q14585 488 aa10.36□□□□□ -0.75
MSH6-208ENST00000493177 C18orf65Q6ZTR6 163 aa10.36□□□□□ -0.75
MSH6-208ENST00000493177 REC114Q7Z4M0 266 aa10.36□□□□□ -0.75
MSH6-208ENST00000493177 KCNRGQ8N5I3 272 aa10.36□□□□□ -0.75
MSH6-208ENST00000493177 OR4X1Q8NH49 305 aa10.36□□□□□ -0.75
MSH6-208ENST00000493177 MYOZ3Q8TDC0 251 aa10.36□□□□□ -0.75
MSH6-208ENST00000493177 RCC1LQ96I51 464 aaKnown RBP10.36□□□□□ -0.75
MSH6-208ENST00000493177 TXN2Q99757 166 aa10.36□□□□□ -0.75
MSH6-208ENST00000493177 ATP5SQ99766 215 aa10.36□□□□□ -0.75
MSH6-208ENST00000493177 GPR61Q9BZJ8 451 aa10.36□□□□□ -0.75
MSH6-208ENST00000493177 ARL6Q9H0F7 186 aa10.36□□□□□ -0.75
MSH6-208ENST00000493177 NPVFQ9HCQ7 196 aa10.36□□□□□ -0.75
MSH6-208ENST00000493177 GAR1Q9NY12 217 aaKnown RBP10.36□□□□□ -0.75
MSH6-208ENST00000493177 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.35□□□□□ -0.75
MSH6-208ENST00000493177 KANTRA0A1W2PQU2 76 aa10.35□□□□□ -0.75
MSH6-208ENST00000493177 ZFP92A6NM28 416 aa10.35□□□□□ -0.75
MSH6-208ENST00000493177 FNDC10F2Z333 226 aa10.35□□□□□ -0.75
MSH6-208ENST00000493177 CLN5O75503 358 aa10.35□□□□□ -0.75
MSH6-208ENST00000493177 IFNA5P01569 189 aa10.35□□□□□ -0.75
MSH6-208ENST00000493177 CLEC3BP05452 202 aa10.35□□□□□ -0.75
MSH6-208ENST00000493177 LGALS1P09382 135 aaKnown RBP10.35□□□□□ -0.75
MSH6-208ENST00000493177 MYCNOSP40205 109 aa10.35□□□□□ -0.75
MSH6-208ENST00000493177 CDX1P47902 265 aaPredicted RBP10.35□□□□□ -0.75
MSH6-208ENST00000493177 LGALSLQ3ZCW2 172 aaPredicted RBP10.35□□□□□ -0.75
MSH6-208ENST00000493177 ZNF343Q6P1L6 599 aa10.35□□□□□ -0.75
MSH6-208ENST00000493177 TMUB2Q71RG4 321 aa10.35□□□□□ -0.75
MSH6-208ENST00000493177 MRAPQ8TCY5 172 aa10.35□□□□□ -0.75
MSH6-208ENST00000493177 CCDC140Q96MF4 163 aa10.35□□□□□ -0.75
MSH6-208ENST00000493177 ARPC5LQ9BPX5 153 aa10.35□□□□□ -0.75
MSH6-208ENST00000493177 PEF1Q9UBV8 284 aaKnown RBP10.35□□□□□ -0.75
MSH6-208ENST00000493177 TRAV30A0A087WSZ9 112 aa10.34□□□□□ -0.75
MSH6-208ENST00000493177 PPP5D1E7EU14 171 aa10.34□□□□□ -0.75
MSH6-208ENST00000493177 TAAR5O14804 337 aa10.34□□□□□ -0.75
MSH6-208ENST00000493177 NUPL2O15504 423 aaKnown RBP10.34□□□□□ -0.75
MSH6-208ENST00000493177 TGOLN2O43493 480 aa10.34□□□□□ -0.75
MSH6-208ENST00000493177 FGF7P21781 194 aa10.34□□□□□ -0.75
MSH6-208ENST00000493177 OR10J1P30954 320 aa10.34□□□□□ -0.75
MSH6-208ENST00000493177 ARL3P36405 182 aa10.34□□□□□ -0.75
MSH6-208ENST00000493177 TIGITQ495A1 244 aa10.34□□□□□ -0.75
MSH6-208ENST00000493177 FAM209BQ5JX69 171 aa10.34□□□□□ -0.75
MSH6-208ENST00000493177 KPRPQ5T749 579 aaPredicted RBP10.34□□□□□ -0.75
MSH6-208ENST00000493177 TMEM144Q7Z5S9 345 aa10.34□□□□□ -0.75
MSH6-208ENST00000493177 TMEM116Q8NCL8 245 aa10.34□□□□□ -0.75
MSH6-208ENST00000493177 SCGB1C1Q8TD33 95 aa10.34□□□□□ -0.75
MSH6-208ENST00000493177 C4orf3Q8WVX3 66 aa10.34□□□□□ -0.75
MSH6-208ENST00000493177 MCRIP2Q9BUT9 160 aaKnown RBP10.34□□□□□ -0.75
MSH6-208ENST00000493177 WFDC1Q9HC57 220 aa10.34□□□□□ -0.75
MSH6-208ENST00000493177 BORCS7-ASMTA0A0B4J1R7 106 aa10.33□□□□□ -0.76
MSH6-208ENST00000493177 F8W735 103 aaPredicted RBP10.33□□□□□ -0.76
MSH6-208ENST00000493177 BCL2L11O43521 198 aa10.33□□□□□ -0.76
MSH6-208ENST00000493177 TRBV12-3P01733 135 aa10.33□□□□□ -0.76
MSH6-208ENST00000493177 FCGR2BP31994 310 aaPredicted RBP10.33□□□□□ -0.76
MSH6-208ENST00000493177 RAB31Q13636 194 aa10.33□□□□□ -0.76
MSH6-208ENST00000493177 ZNF266Q14584 549 aa10.33□□□□□ -0.76
MSH6-208ENST00000493177 VWC2Q2TAL6 325 aa10.33□□□□□ -0.76
MSH6-208ENST00000493177 DEFB136Q30KP8 78 aa10.33□□□□□ -0.76
MSH6-208ENST00000493177 TEPPQ6URK8 271 aa10.33□□□□□ -0.76
MSH6-208ENST00000493177 BTNL8Q6UX41 500 aa10.33□□□□□ -0.76
MSH6-208ENST00000493177 C9orf62Q8N4C0 152 aa10.33□□□□□ -0.76
MSH6-208ENST00000493177 LINC00482Q8N8I6 264 aa10.33□□□□□ -0.76
MSH6-208ENST00000493177 WFDC9Q8NEX5 89 aa10.33□□□□□ -0.76
MSH6-208ENST00000493177 DUX3Q96PT4 197 aa10.33□□□□□ -0.76
MSH6-208ENST00000493177 PKD1L1Q8TDX9 2849 aa10.32□□□□□ -0.76
MSH6-208ENST00000493177 I3L521 148 aa10.32□□□□□ -0.76
MSH6-208ENST00000493177 CCL24O00175 119 aa10.32□□□□□ -0.76
MSH6-208ENST00000493177 GGCTO75223 188 aaKnown RBP10.32□□□□□ -0.76
MSH6-208ENST00000493177 HSPB1P04792 205 aaKnown RBP10.32□□□□□ -0.76
MSH6-208ENST00000493177 IGLC1P0CG04 106 aa10.32□□□□□ -0.76
MSH6-208ENST00000493177 C4BPBP20851 252 aa10.32□□□□□ -0.76
MSH6-208ENST00000493177 RPL7L1Q6DKI1 246 aaKnown RBP10.32□□□□□ -0.76
MSH6-208ENST00000493177 SPSB3Q6PJ21 355 aa10.32□□□□□ -0.76
MSH6-208ENST00000493177 THAP8Q8NA92 274 aa10.32□□□□□ -0.76
MSH6-208ENST00000493177 OR1N2Q8NGR9 330 aa10.32□□□□□ -0.76
MSH6-208ENST00000493177 PPP1R14BQ96C90 147 aa10.32□□□□□ -0.76
MSH6-208ENST00000493177 ATP6V0BQ99437 205 aa10.32□□□□□ -0.76
MSH6-208ENST00000493177 CHRDL1Q9BU40 450 aa10.32□□□□□ -0.76
MSH6-208ENST00000493177 ZNF471Q9BX82 626 aaPredicted RBP10.32□□□□□ -0.76
MSH6-208ENST00000493177 AURKAIP1Q9NWT8 199 aaPredicted RBP10.32□□□□□ -0.76
MSH6-208ENST00000493177 WDR83OSQ9Y284 106 aa10.32□□□□□ -0.76
MSH6-208ENST00000493177 IGHV4OR15-8A0A075B7B6 117 aa10.31□□□□□ -0.76
MSH6-208ENST00000493177 A0A087WW49 117 aa10.31□□□□□ -0.76
MSH6-208ENST00000493177 IGHV3-35A0A0C4DH35 117 aa10.31□□□□□ -0.76
MSH6-208ENST00000493177 LINC01619G3V211 115 aa10.31□□□□□ -0.76
MSH6-208ENST00000493177 BMPR1BO00238 502 aa10.31□□□□□ -0.76
MSH6-208ENST00000493177 FABP1P07148 127 aa10.31□□□□□ -0.76
MSH6-208ENST00000493177 CTSGP08311 255 aa10.31□□□□□ -0.76
MSH6-208ENST00000493177 CAMLGP49069 296 aa10.31□□□□□ -0.76
MSH6-208ENST00000493177 RELQ04864 619 aaPredicted RBP10.31□□□□□ -0.76
MSH6-208ENST00000493177 OPCMLQ14982 345 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms