RNA–Protein interactions for RNA: ENST00000492361.1

TNFRSF1B-203, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best)

Gene TNFRSF1B, Length 3,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-203ENST00000492361 SH2D7A6NKC9 451 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF1B-203ENST00000492361 C17orf100A8MU93 164 aa12.35□□□□□ -0.43
TNFRSF1B-203ENST00000492361 PRCDQ00LT1 54 aa12.35□□□□□ -0.43
TNFRSF1B-203ENST00000492361 VMA21Q3ZAQ7 101 aa12.35□□□□□ -0.43
TNFRSF1B-203ENST00000492361 Q6ZN92 141 aa12.35□□□□□ -0.43
TNFRSF1B-203ENST00000492361 SETD2Q9BYW2 2564 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF1B-203ENST00000492361 A0A0G2JNJ9 132 aa12.34□□□□□ -0.43
TNFRSF1B-203ENST00000492361 FAM222BQ8WU58 562 aa12.34□□□□□ -0.43
TNFRSF1B-203ENST00000492361 Q9UFV3 132 aa12.34□□□□□ -0.43
TNFRSF1B-203ENST00000492361 PRNTQ86SH4 94 aa12.34□□□□□ -0.43
TNFRSF1B-203ENST00000492361 OR5R1Q8NH85 324 aa12.34□□□□□ -0.43
TNFRSF1B-203ENST00000492361 PARD6GQ9BYG4 376 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF1B-203ENST00000492361 ARL2-SNX15V9GYD0 113 aa12.34□□□□□ -0.43
TNFRSF1B-203ENST00000492361 RNASE2P10153 161 aaKnown RBP12.34□□□□□ -0.43
TNFRSF1B-203ENST00000492361 BRS3P32247 399 aa12.34□□□□□ -0.43
TNFRSF1B-203ENST00000492361 ZNF138P52744 262 aa12.34□□□□□ -0.43
TNFRSF1B-203ENST00000492361 ARF6P62330 175 aa12.34□□□□□ -0.43
TNFRSF1B-203ENST00000492361 WT1-ASQ06250 92 aa12.34□□□□□ -0.43
TNFRSF1B-203ENST00000492361 CD69Q07108 199 aa12.34□□□□□ -0.43
TNFRSF1B-203ENST00000492361 ADIPOQQ15848 244 aa12.34□□□□□ -0.43
TNFRSF1B-203ENST00000492361 RPEQ96AT9 228 aa12.34□□□□□ -0.43
TNFRSF1B-203ENST00000492361 C1orf159Q96HA4 380 aa12.34□□□□□ -0.43
TNFRSF1B-203ENST00000492361 PYGO2Q9BRQ0 406 aa12.34□□□□□ -0.43
TNFRSF1B-203ENST00000492361 FNDC4Q9H6D8 234 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF1B-203ENST00000492361 FOXA2Q9Y261 457 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF1B-203ENST00000492361 M0R2Z0 102 aa12.33□□□□□ -0.44
TNFRSF1B-203ENST00000492361 BPIFB3P59826 476 aa12.33□□□□□ -0.44
TNFRSF1B-203ENST00000492361 RPL15P61313 204 aaKnown RBP12.33□□□□□ -0.44
TNFRSF1B-203ENST00000492361 MAJINQ3KP22 176 aa12.33□□□□□ -0.44
TNFRSF1B-203ENST00000492361 ZNF788Q6ZQV5 615 aa12.33□□□□□ -0.44
TNFRSF1B-203ENST00000492361 NEU1Q99519 415 aa12.33□□□□□ -0.44
TNFRSF1B-203ENST00000492361 NCBP2LA6PVI3 153 aaKnown RBP12.33□□□□□ -0.44
TNFRSF1B-203ENST00000492361 FOXL1Q12952 345 aa12.33□□□□□ -0.44
TNFRSF1B-203ENST00000492361 OR4C13Q8NGP0 309 aa12.33□□□□□ -0.44
TNFRSF1B-203ENST00000492361 NOL4LQ96MY1 436 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF1B-203ENST00000492361 NRN1Q9NPD7 142 aa12.33□□□□□ -0.44
TNFRSF1B-203ENST00000492361 CENPEQ02224 2701 aa12.33□□□□□ -0.44
TNFRSF1B-203ENST00000492361 USP9YO00507 2555 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF1B-203ENST00000492361 SERTM2A0A1B0GWG4 89 aa12.33□□□□□ -0.44
TNFRSF1B-203ENST00000492361 MBD3L4A6NDZ8 208 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF1B-203ENST00000492361 MBD3L3A6NE82 208 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF1B-203ENST00000492361 MBD3L5A6NJ08 208 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF1B-203ENST00000492361 DLL1O00548 723 aa12.33□□□□□ -0.44
TNFRSF1B-203ENST00000492361 HINT1P49773 126 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF1B-203ENST00000492361 TAS2R60P59551 318 aa12.33□□□□□ -0.44
TNFRSF1B-203ENST00000492361 TMEM183BQ1AE95 376 aa12.33□□□□□ -0.44
TNFRSF1B-203ENST00000492361 VWC2Q2TAL6 325 aa12.33□□□□□ -0.44
TNFRSF1B-203ENST00000492361 OR1L4Q8NGR5 311 aa12.33□□□□□ -0.44
TNFRSF1B-203ENST00000492361 MBD3L2Q8NHZ7 208 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF1B-203ENST00000492361 CLEC5AQ9NY25 188 aa12.32□□□□□ -0.44
TNFRSF1B-203ENST00000492361 IGHV3OR16-13A0A075B7E8 117 aa12.32□□□□□ -0.44
TNFRSF1B-203ENST00000492361 IGHV3-74A0A0B4J1X5 117 aa12.32□□□□□ -0.44
TNFRSF1B-203ENST00000492361 SPATA45Q537H7 98 aa12.32□□□□□ -0.44
TNFRSF1B-203ENST00000492361 Q6ZVH6 145 aa12.32□□□□□ -0.44
TNFRSF1B-203ENST00000492361 LSM4Q9Y4Z0 139 aaKnown RBP12.32□□□□□ -0.44
TNFRSF1B-203ENST00000492361 TLN2Q9Y4G6 2542 aa12.32□□□□□ -0.44
TNFRSF1B-203ENST00000492361 HIGD1CA8MV81 97 aa12.31□□□□□ -0.44
TNFRSF1B-203ENST00000492361 TM4SF5O14894 197 aa12.31□□□□□ -0.44
TNFRSF1B-203ENST00000492361 MMDQ15546 238 aa12.31□□□□□ -0.44
TNFRSF1B-203ENST00000492361 C21orf62-AS1Q17RA5 79 aa12.31□□□□□ -0.44
TNFRSF1B-203ENST00000492361 FBXL7Q9UJT9 491 aa12.31□□□□□ -0.44
TNFRSF1B-203ENST00000492361 PTPN13Q12923 2485 aa12.31□□□□□ -0.44
TNFRSF1B-203ENST00000492361 H0YJW9 148 aa12.31□□□□□ -0.44
TNFRSF1B-203ENST00000492361 RPL27AP46776 148 aaKnown RBP12.31□□□□□ -0.44
TNFRSF1B-203ENST00000492361 OR52E5Q8NH55 327 aa12.31□□□□□ -0.44
TNFRSF1B-203ENST00000492361 SVEP1Q4LDE5 3571 aa12.31□□□□□ -0.44
TNFRSF1B-203ENST00000492361 SLC25A48Q6ZT89 311 aaKnown RBP12.31□□□□□ -0.44
TNFRSF1B-203ENST00000492361 EXOC3-AS1Q8N2X6 119 aa12.31□□□□□ -0.44
TNFRSF1B-203ENST00000492361 LPAR2Q9HBW0 351 aa12.31□□□□□ -0.44
TNFRSF1B-203ENST00000492361 V9GYV3 84 aa12.31□□□□□ -0.44
TNFRSF1B-203ENST00000492361 SNAI2O43623 268 aa12.3□□□□□ -0.44
TNFRSF1B-203ENST00000492361 RAB4AP20338 218 aa12.3□□□□□ -0.44
TNFRSF1B-203ENST00000492361 GOLT1AQ6ZVE7 132 aa12.3□□□□□ -0.44
TNFRSF1B-203ENST00000492361 DDB2Q92466 427 aa12.3□□□□□ -0.44
TNFRSF1B-203ENST00000492361 RAB1CQ92928 201 aa12.3□□□□□ -0.44
TNFRSF1B-203ENST00000492361 WASHC3Q9Y3C0 194 aa12.3□□□□□ -0.44
TNFRSF1B-203ENST00000492361 CHEK1O14757 476 aa12.3□□□□□ -0.44
TNFRSF1B-203ENST00000492361 HNRNPA3P51991 378 aaKnown RBP12.3□□□□□ -0.44
TNFRSF1B-203ENST00000492361 SORL1Q92673 2214 aa12.3□□□□□ -0.44
TNFRSF1B-203ENST00000492361 SLAQ13239 276 aa12.3□□□□□ -0.44
TNFRSF1B-203ENST00000492361 TMEM177Q53S58 311 aa12.3□□□□□ -0.44
TNFRSF1B-203ENST00000492361 ZNF503Q96F45 646 aa12.3□□□□□ -0.44
TNFRSF1B-203ENST00000492361 CDC42EP3Q9UKI2 254 aa12.3□□□□□ -0.44
TNFRSF1B-203ENST00000492361 RNF114Q9Y508 228 aa12.3□□□□□ -0.44
TNFRSF1B-203ENST00000492361 LINC00312Q9Y6C7 94 aa12.3□□□□□ -0.44
TNFRSF1B-203ENST00000492361 PEX7O00628 323 aa12.29□□□□□ -0.44
TNFRSF1B-203ENST00000492361 COL8A1P27658 744 aa12.29□□□□□ -0.44
TNFRSF1B-203ENST00000492361 LURAP1LQ8IV03 231 aa12.29□□□□□ -0.44
TNFRSF1B-203ENST00000492361 PNKDQ8N490 385 aa12.29□□□□□ -0.44
TNFRSF1B-203ENST00000492361 NBEAP1P0C6P0 100 aa12.29□□□□□ -0.44
TNFRSF1B-203ENST00000492361 PRR20EP86478 221 aa12.29□□□□□ -0.44
TNFRSF1B-203ENST00000492361 PRR20CP86479 221 aa12.29□□□□□ -0.44
TNFRSF1B-203ENST00000492361 PRR20DP86480 221 aa12.29□□□□□ -0.44
TNFRSF1B-203ENST00000492361 PRR20BP86481 221 aa12.29□□□□□ -0.44
TNFRSF1B-203ENST00000492361 PRR20AP86496 221 aa12.29□□□□□ -0.44
TNFRSF1B-203ENST00000492361 RUSC1-AS1Q66K80 236 aa12.29□□□□□ -0.44
TNFRSF1B-203ENST00000492361 TP73-AS1Q9UF72 201 aa12.29□□□□□ -0.44
TNFRSF1B-203ENST00000492361 A0A1W2PPI3 338 aa12.29□□□□□ -0.44
TNFRSF1B-203ENST00000492361 NUDT10Q8NFP7 164 aa12.29□□□□□ -0.44
TNFRSF1B-203ENST00000492361 NUDT11Q96G61 164 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms