RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 U3KQ87 197 aa18.34■□□□□ 0.53
UPF3A-209ENST00000492270 LOC102724200A0A096LPH7 203 aaPredicted RBP18.33■□□□□ 0.52
UPF3A-209ENST00000492270 PIGBOS1A0A0B4J2F0 54 aa18.33■□□□□ 0.52
UPF3A-209ENST00000492270 C3orf84H3BNL1 204 aa18.33■□□□□ 0.52
UPF3A-209ENST00000492270 TRAV30A0A087WSZ9 112 aa18.32■□□□□ 0.52
UPF3A-209ENST00000492270 C9orf170A2RU37 121 aa18.32■□□□□ 0.52
UPF3A-209ENST00000492270 SCGB2A1O75556 95 aa18.32■□□□□ 0.52
UPF3A-209ENST00000492270 IAPPP10997 89 aa18.32■□□□□ 0.52
UPF3A-209ENST00000492270 OR10J1P30954 320 aa18.32■□□□□ 0.52
UPF3A-209ENST00000492270 UBE2MP61081 183 aaKnown RBP18.32■□□□□ 0.52
UPF3A-209ENST00000492270 ETFRF1Q6IPR1 90 aa18.32■□□□□ 0.52
UPF3A-209ENST00000492270 NOXA1Q86UR1 476 aa18.32■□□□□ 0.52
UPF3A-209ENST00000492270 OR1S2Q8NGQ3 325 aa18.32■□□□□ 0.52
UPF3A-209ENST00000492270 NPIPB3Q92617 1050 aa18.32■□□□□ 0.52
UPF3A-209ENST00000492270 ACY3Q96HD9 319 aa18.32■□□□□ 0.52
UPF3A-209ENST00000492270 TMED3Q9Y3Q3 217 aa18.32■□□□□ 0.52
UPF3A-209ENST00000492270 DFFBO76075 338 aa18.31■□□□□ 0.52
UPF3A-209ENST00000492270 SLC25A6P12236 298 aa18.31■□□□□ 0.52
UPF3A-209ENST00000492270 NPPCP23582 126 aa18.31■□□□□ 0.52
UPF3A-209ENST00000492270 ZNF124Q15973 351 aa18.31■□□□□ 0.52
UPF3A-209ENST00000492270 GGNBP1Q5YKI7 109 aa18.31■□□□□ 0.52
UPF3A-209ENST00000492270 CSMD3Q7Z407 3707 aa18.31■□□□□ 0.52
UPF3A-209ENST00000492270 ADAP1O75689 374 aa18.3■□□□□ 0.52
UPF3A-209ENST00000492270 BMI1P35226 326 aa18.3■□□□□ 0.52
UPF3A-209ENST00000492270 APRG1Q8IVJ8 170 aa18.3■□□□□ 0.52
UPF3A-209ENST00000492270 METTL26Q96S19 204 aa18.3■□□□□ 0.52
UPF3A-209ENST00000492270 MAGT1Q9H0U3 335 aa18.3■□□□□ 0.52
UPF3A-209ENST00000492270 CENPXA8MT69 81 aa18.29■□□□□ 0.52
UPF3A-209ENST00000492270 IFNA4P05014 189 aa18.29■□□□□ 0.52
UPF3A-209ENST00000492270 ANXA7P20073 488 aaKnown RBP18.29■□□□□ 0.52
UPF3A-209ENST00000492270 CRYBB3P26998 211 aa18.29■□□□□ 0.52
UPF3A-209ENST00000492270 CASC10Q5T4H9 136 aa18.29■□□□□ 0.52
UPF3A-209ENST00000492270 WFDC3Q8IUB2 231 aa18.29■□□□□ 0.52
UPF3A-209ENST00000492270 C7orf50Q9BRJ6 194 aaKnown RBP18.29■□□□□ 0.52
UPF3A-209ENST00000492270 FAM90A26D6RGX4 464 aa18.28■□□□□ 0.52
UPF3A-209ENST00000492270 PLA2G10O15496 165 aa18.28■□□□□ 0.52
UPF3A-209ENST00000492270 OR4E1P0C645 316 aa18.28■□□□□ 0.52
UPF3A-209ENST00000492270 YPEL3P61236 119 aaPredicted RBP18.28■□□□□ 0.52
UPF3A-209ENST00000492270 DHRS2Q13268 280 aa18.28■□□□□ 0.52
UPF3A-209ENST00000492270 MS4A6AQ9H2W1 248 aa18.28■□□□□ 0.52
UPF3A-209ENST00000492270 MAP6D1Q9H9H5 199 aa18.28■□□□□ 0.52
UPF3A-209ENST00000492270 MPTX1A8MV57 137 aa18.27■□□□□ 0.52
UPF3A-209ENST00000492270 RPL35AP18077 110 aaKnown RBP18.27■□□□□ 0.52
UPF3A-209ENST00000492270 LYG2Q86SG7 212 aa18.27■□□□□ 0.52
UPF3A-209ENST00000492270 Q8WTZ3 238 aa18.27■□□□□ 0.52
UPF3A-209ENST00000492270 TMEM231Q9H6L2 316 aa18.27■□□□□ 0.52
UPF3A-209ENST00000492270 IL4P05112 153 aa18.26■□□□□ 0.51
UPF3A-209ENST00000492270 LYL1P12980 280 aa18.26■□□□□ 0.51
UPF3A-209ENST00000492270 P2RY1P47900 373 aa18.26■□□□□ 0.51
UPF3A-209ENST00000492270 RPL11P62913 178 aaKnown RBP18.26■□□□□ 0.51
UPF3A-209ENST00000492270 USF2Q15853 346 aaPredicted RBP18.26■□□□□ 0.51
UPF3A-209ENST00000492270 FAM24BQ8N5W8 94 aa18.26■□□□□ 0.51
UPF3A-209ENST00000492270 PAIP2BQ9ULR5 123 aaKnown RBP18.26■□□□□ 0.51
UPF3A-209ENST00000492270 A0A1W2PS18 150 aa18.25■□□□□ 0.51
UPF3A-209ENST00000492270 WRBO00258 174 aa18.25■□□□□ 0.51
UPF3A-209ENST00000492270 SYNGR2O43760 224 aa18.25■□□□□ 0.51
UPF3A-209ENST00000492270 MED6O75586 246 aa18.25■□□□□ 0.51
UPF3A-209ENST00000492270 TOMM40O96008 361 aa18.25■□□□□ 0.51
UPF3A-209ENST00000492270 CD5P06127 495 aa18.25■□□□□ 0.51
UPF3A-209ENST00000492270 ATP5IP56385 69 aaPredicted RBP18.25■□□□□ 0.51
UPF3A-209ENST00000492270 PAFAH1B2P68402 229 aa18.25■□□□□ 0.51
UPF3A-209ENST00000492270 GAMTQ14353 236 aa18.25■□□□□ 0.51
UPF3A-209ENST00000492270 C4orf46Q504U0 113 aa18.25■□□□□ 0.51
UPF3A-209ENST00000492270 ZFAND6Q6FIF0 208 aa18.25■□□□□ 0.51
UPF3A-209ENST00000492270 OVOL2Q9BRP0 275 aa18.25■□□□□ 0.51
UPF3A-209ENST00000492270 U3KQE9 123 aa18.25■□□□□ 0.51
UPF3A-209ENST00000492270 DNASE2O00115 360 aaPredicted RBP18.24■□□□□ 0.51
UPF3A-209ENST00000492270 LYRM1O43325 122 aa18.24■□□□□ 0.51
UPF3A-209ENST00000492270 HNRNPCP07910 306 aaKnown RBP eCLIP18.24■□□□□ 0.51
UPF3A-209ENST00000492270 COQ8AQ8NI60 647 aa18.24■□□□□ 0.51
UPF3A-209ENST00000492270 SLC35E1Q96K37 410 aa18.24■□□□□ 0.51
UPF3A-209ENST00000492270 RABAC1Q9UI14 185 aa18.24■□□□□ 0.51
UPF3A-209ENST00000492270 STARD9Q9P2P6 4700 aa18.23■□□□□ 0.51
UPF3A-209ENST00000492270 IGKV1D-37A0A075B6S9 117 aa18.23■□□□□ 0.51
UPF3A-209ENST00000492270 PSG1P11464 419 aa18.23■□□□□ 0.51
UPF3A-209ENST00000492270 GPX4P36969 197 aaPredicted RBP18.23■□□□□ 0.51
UPF3A-209ENST00000492270 APOC4P55056 127 aa18.23■□□□□ 0.51
UPF3A-209ENST00000492270 STXBP6Q8NFX7 210 aa18.23■□□□□ 0.51
UPF3A-209ENST00000492270 NARS2Q96I59 477 aaKnown RBP18.23■□□□□ 0.51
UPF3A-209ENST00000492270 C20orf85Q9H1P6 137 aa18.23■□□□□ 0.51
UPF3A-209ENST00000492270 AGRNO00468 2067 aa18.22■□□□□ 0.51
UPF3A-209ENST00000492270 RD3LP0DJH9 198 aa18.22■□□□□ 0.51
UPF3A-209ENST00000492270 RAB11AP62491 216 aa18.22■□□□□ 0.51
UPF3A-209ENST00000492270 DEFB135Q30KP9 77 aa18.22■□□□□ 0.51
UPF3A-209ENST00000492270 CNPY1Q3B7I2 92 aa18.22■□□□□ 0.51
UPF3A-209ENST00000492270 CIB3Q96Q77 187 aaPredicted RBP18.22■□□□□ 0.51
UPF3A-209ENST00000492270 ZFP92A6NM28 416 aa18.21■□□□□ 0.51
UPF3A-209ENST00000492270 H3BP45 60 aa18.21■□□□□ 0.51
UPF3A-209ENST00000492270 CMC4P56277 68 aaPredicted RBP18.21■□□□□ 0.51
UPF3A-209ENST00000492270 ZNF90Q03938 601 aa18.21■□□□□ 0.51
UPF3A-209ENST00000492270 OR51G1Q8NGK1 321 aa18.21■□□□□ 0.51
UPF3A-209ENST00000492270 GRAMD2BQ96HH9 432 aa18.21■□□□□ 0.51
UPF3A-209ENST00000492270 TRAV2A0A0B4J234 112 aa18.2■□□□□ 0.5
UPF3A-209ENST00000492270 PRSS46E5RG02 174 aa18.2■□□□□ 0.5
UPF3A-209ENST00000492270 DEFB131AP59861 70 aa18.2■□□□□ 0.5
UPF3A-209ENST00000492270 POLR2GP62487 172 aaKnown RBP eCLIP18.2■□□□□ 0.5
UPF3A-209ENST00000492270 LEMD1Q68G75 181 aa18.2■□□□□ 0.5
UPF3A-209ENST00000492270 C16orf54Q6UWD8 224 aa18.2■□□□□ 0.5
UPF3A-209ENST00000492270 OR4D5Q8NGN0 318 aa18.2■□□□□ 0.5
UPF3A-209ENST00000492270 GLMPQ8WWB7 406 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms