RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 PHLDA1Q8WV24 401 aaPredicted RBP6.1□□□□□ -1.43
SMARCB1-207ENST00000491967 GLMPQ8WWB7 406 aa6.1□□□□□ -1.43
SMARCB1-207ENST00000491967 METTL26Q96S19 204 aa6.1□□□□□ -1.43
SMARCB1-207ENST00000491967 PRRT1Q99946 306 aa6.1□□□□□ -1.43
SMARCB1-207ENST00000491967 SLIRPQ9GZT3 109 aaKnown RBP6.1□□□□□ -1.43
SMARCB1-207ENST00000491967 HRH4Q9H3N8 390 aa6.1□□□□□ -1.43
SMARCB1-207ENST00000491967 C14orf166Q9Y224 244 aaKnown RBP6.1□□□□□ -1.43
SMARCB1-207ENST00000491967 IGKV3-7A0A075B6H7 116 aa6.09□□□□□ -1.43
SMARCB1-207ENST00000491967 IGHV3-66A0A0C4DH42 116 aa6.09□□□□□ -1.43
SMARCB1-207ENST00000491967 RPS10-NUDT3A0A1W2PQS6 291 aa6.09□□□□□ -1.43
SMARCB1-207ENST00000491967 CCDC160A6NGH7 325 aa6.09□□□□□ -1.43
SMARCB1-207ENST00000491967 ZNF705EA8MWA4 302 aaPredicted RBP6.09□□□□□ -1.43
SMARCB1-207ENST00000491967 DISC1C4P0D8 188 aa6.09□□□□□ -1.43
SMARCB1-207ENST00000491967 DNASE2O00115 360 aaPredicted RBP6.09□□□□□ -1.43
SMARCB1-207ENST00000491967 RGS5O15539 181 aa6.09□□□□□ -1.43
SMARCB1-207ENST00000491967 LY6G6CO95867 125 aa6.09□□□□□ -1.43
SMARCB1-207ENST00000491967 ATP5IP56385 69 aaPredicted RBP6.09□□□□□ -1.43
SMARCB1-207ENST00000491967 SUPT4H1P63272 117 aaKnown RBP6.09□□□□□ -1.43
SMARCB1-207ENST00000491967 PMS2P11Q13670 270 aa6.09□□□□□ -1.43
SMARCB1-207ENST00000491967 RBMS2Q15434 407 aaKnown RBP6.09□□□□□ -1.43
SMARCB1-207ENST00000491967 C16orf54Q6UWD8 224 aa6.09□□□□□ -1.43
SMARCB1-207ENST00000491967 Q8NAQ8 132 aa6.09□□□□□ -1.43
SMARCB1-207ENST00000491967 SLC24A4Q8NFF2 622 aa6.09□□□□□ -1.43
SMARCB1-207ENST00000491967 OR51S1Q8NGJ8 323 aa6.09□□□□□ -1.43
SMARCB1-207ENST00000491967 OR1S2Q8NGQ3 325 aa6.09□□□□□ -1.43
SMARCB1-207ENST00000491967 DIRAS2Q96HU8 199 aa6.09□□□□□ -1.43
SMARCB1-207ENST00000491967 MFFQ9GZY8 342 aa6.09□□□□□ -1.43
SMARCB1-207ENST00000491967 ENY2Q9NPA8 101 aa6.09□□□□□ -1.43
SMARCB1-207ENST00000491967 HSPB7Q9UBY9 170 aa6.09□□□□□ -1.43
SMARCB1-207ENST00000491967 CACNG5Q9UF02 275 aa6.09□□□□□ -1.43
SMARCB1-207ENST00000491967 A0A0B4J2A0 478 aa6.08□□□□□ -1.44
SMARCB1-207ENST00000491967 BUB3O43684 328 aa6.08□□□□□ -1.44
SMARCB1-207ENST00000491967 PITX3O75364 302 aa6.08□□□□□ -1.44
SMARCB1-207ENST00000491967 SCGB2A1O75556 95 aa6.08□□□□□ -1.44
SMARCB1-207ENST00000491967 CA1P00915 261 aaPredicted RBP6.08□□□□□ -1.44
SMARCB1-207ENST00000491967 SPP1P10451 314 aa6.08□□□□□ -1.44
SMARCB1-207ENST00000491967 OR10J1P30954 320 aa6.08□□□□□ -1.44
SMARCB1-207ENST00000491967 TNFSF8P32971 234 aa6.08□□□□□ -1.44
SMARCB1-207ENST00000491967 RND2P52198 227 aa6.08□□□□□ -1.44
SMARCB1-207ENST00000491967 AP2S1P53680 142 aaPredicted RBP6.08□□□□□ -1.44
SMARCB1-207ENST00000491967 TCTAP57738 103 aa6.08□□□□□ -1.44
SMARCB1-207ENST00000491967 TMEM268Q5VZI3 342 aa6.08□□□□□ -1.44
SMARCB1-207ENST00000491967 LEMD1Q68G75 181 aa6.08□□□□□ -1.44
SMARCB1-207ENST00000491967 ETFRF1Q6IPR1 90 aa6.08□□□□□ -1.44
SMARCB1-207ENST00000491967 MORN3Q6PF18 240 aaPredicted RBP6.08□□□□□ -1.44
SMARCB1-207ENST00000491967 NOXA1Q86UR1 476 aa6.08□□□□□ -1.44
SMARCB1-207ENST00000491967 C11orf45Q8TAV5 145 aa6.08□□□□□ -1.44
SMARCB1-207ENST00000491967 Q8WTZ3 238 aa6.08□□□□□ -1.44
SMARCB1-207ENST00000491967 HEYLQ9NQ87 328 aaPredicted RBP6.08□□□□□ -1.44
SMARCB1-207ENST00000491967 RSL24D1Q9UHA3 163 aaKnown RBP6.08□□□□□ -1.44
SMARCB1-207ENST00000491967 SHPKQ9UHJ6 478 aa6.08□□□□□ -1.44
SMARCB1-207ENST00000491967 U3KQ87 197 aa6.08□□□□□ -1.44
SMARCB1-207ENST00000491967 X6R8D5 127 aa6.08□□□□□ -1.44
SMARCB1-207ENST00000491967 FRAS1Q86XX4 4008 aa6.08□□□□□ -1.44
SMARCB1-207ENST00000491967 HELTA6NFD8 242 aa6.07□□□□□ -1.44
SMARCB1-207ENST00000491967 NOL3O60936 208 aaKnown RBP6.07□□□□□ -1.44
SMARCB1-207ENST00000491967 TOMM40O96008 361 aa6.07□□□□□ -1.44
SMARCB1-207ENST00000491967 HNRNPCP07910 306 aaKnown RBP eCLIP6.07□□□□□ -1.44
SMARCB1-207ENST00000491967 RBMY1A1P0DJD3 496 aaKnown RBP6.07□□□□□ -1.44
SMARCB1-207ENST00000491967 RBMY1CP0DJD4 496 aa6.07□□□□□ -1.44
SMARCB1-207ENST00000491967 SULT1A3P0DMM9 295 aa6.07□□□□□ -1.44
SMARCB1-207ENST00000491967 SULT1A4P0DMN0 295 aa6.07□□□□□ -1.44
SMARCB1-207ENST00000491967 MIFP14174 115 aa6.07□□□□□ -1.44
SMARCB1-207ENST00000491967 C4BPBP20851 252 aa6.07□□□□□ -1.44
SMARCB1-207ENST00000491967 CCR6P51684 374 aa6.07□□□□□ -1.44
SMARCB1-207ENST00000491967 NANOS2P60321 138 aaKnown RBP6.07□□□□□ -1.44
SMARCB1-207ENST00000491967 RPL11P62913 178 aaKnown RBP6.07□□□□□ -1.44
SMARCB1-207ENST00000491967 IL18Q14116 193 aa6.07□□□□□ -1.44
SMARCB1-207ENST00000491967 RBMY1FQ15415 496 aaKnown RBP6.07□□□□□ -1.44
SMARCB1-207ENST00000491967 USF2Q15853 346 aaPredicted RBP6.07□□□□□ -1.44
SMARCB1-207ENST00000491967 STHQ8IWL8 128 aa6.07□□□□□ -1.44
SMARCB1-207ENST00000491967 RPP25LQ8N5L8 163 aaKnown RBP6.07□□□□□ -1.44
SMARCB1-207ENST00000491967 RNASE11Q8TAA1 199 aaKnown RBP6.07□□□□□ -1.44
SMARCB1-207ENST00000491967 NPIPB3Q92617 1050 aa6.07□□□□□ -1.44
SMARCB1-207ENST00000491967 SCGB3A2Q96PL1 93 aa6.07□□□□□ -1.44
SMARCB1-207ENST00000491967 RAB40CQ96S21 281 aa6.07□□□□□ -1.44
SMARCB1-207ENST00000491967 RABAC1Q9UI14 185 aa6.07□□□□□ -1.44
SMARCB1-207ENST00000491967 SCP2D1Q9UJQ7 156 aa6.07□□□□□ -1.44
SMARCB1-207ENST00000491967 KCNIP3Q9Y2W7 256 aa6.07□□□□□ -1.44
SMARCB1-207ENST00000491967 VPS13DQ5THJ4 4388 aa6.07□□□□□ -1.44
SMARCB1-207ENST00000491967 IGKV1D-37A0A075B6S9 117 aa6.06□□□□□ -1.44
SMARCB1-207ENST00000491967 CEBPZOSA8MTT3 80 aa6.06□□□□□ -1.44
SMARCB1-207ENST00000491967 C11orf94C9JXX5 98 aa6.06□□□□□ -1.44
SMARCB1-207ENST00000491967 FAM90A26D6RGX4 464 aa6.06□□□□□ -1.44
SMARCB1-207ENST00000491967 H3BMQ9 156 aa6.06□□□□□ -1.44
SMARCB1-207ENST00000491967 ZNF688P0C7X2 276 aa6.06□□□□□ -1.44
SMARCB1-207ENST00000491967 RD3LP0DJH9 198 aa6.06□□□□□ -1.44
SMARCB1-207ENST00000491967 PSG1P11464 419 aa6.06□□□□□ -1.44
SMARCB1-207ENST00000491967 SLC25A6P12236 298 aa6.06□□□□□ -1.44
SMARCB1-207ENST00000491967 NPY1RP25929 384 aa6.06□□□□□ -1.44
SMARCB1-207ENST00000491967 GPX4P36969 197 aaPredicted RBP6.06□□□□□ -1.44
SMARCB1-207ENST00000491967 EIF2B2P49770 351 aaKnown RBP6.06□□□□□ -1.44
SMARCB1-207ENST00000491967 KLF9Q13886 244 aaPredicted RBP6.06□□□□□ -1.44
SMARCB1-207ENST00000491967 SMCO1Q147U7 214 aa6.06□□□□□ -1.44
SMARCB1-207ENST00000491967 LYZL2Q7Z4W2 148 aa6.06□□□□□ -1.44
SMARCB1-207ENST00000491967 LRTM2Q8N967 370 aa6.06□□□□□ -1.44
SMARCB1-207ENST00000491967 STXBP6Q8NFX7 210 aa6.06□□□□□ -1.44
SMARCB1-207ENST00000491967 DEDD2Q8WXF8 326 aa6.06□□□□□ -1.44
SMARCB1-207ENST00000491967 TRIM63Q969Q1 353 aa6.06□□□□□ -1.44
SMARCB1-207ENST00000491967 NARS2Q96I59 477 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms