RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 PPP1R1AQ13522 171 aa1.28□□□□□ -2.2
VTA1-204ENST00000491881 MIAQ16674 131 aa1.28□□□□□ -2.2
VTA1-204ENST00000491881 LYZL1Q6UWQ5 148 aa1.28□□□□□ -2.2
VTA1-204ENST00000491881 RASSF6Q6ZTQ3 369 aa1.28□□□□□ -2.2
VTA1-204ENST00000491881 HIST2H3AQ71DI3 136 aa1.28□□□□□ -2.2
VTA1-204ENST00000491881 SLC51BQ86UW2 128 aa1.28□□□□□ -2.2
VTA1-204ENST00000491881 UBL4BQ8N7F7 174 aa1.28□□□□□ -2.2
VTA1-204ENST00000491881 SPACA4Q8TDM5 124 aa1.28□□□□□ -2.2
VTA1-204ENST00000491881 SLC7A6Q92536 515 aa1.28□□□□□ -2.2
VTA1-204ENST00000491881 DOHHQ9BU89 302 aa1.28□□□□□ -2.2
VTA1-204ENST00000491881 VCX3BQ9H321 246 aa1.28□□□□□ -2.2
VTA1-204ENST00000491881 PLEKHJ1Q9NW61 149 aa1.28□□□□□ -2.2
VTA1-204ENST00000491881 C15orf41Q9Y2V0 281 aa1.28□□□□□ -2.2
VTA1-204ENST00000491881 ABCC12Q96J65 1359 aa1.28□□□□□ -2.2
VTA1-204ENST00000491881 ANKRD30AQ9BXX3 1397 aa1.28□□□□□ -2.2
VTA1-204ENST00000491881 NFAT5O94916 1531 aa1.28□□□□□ -2.2
VTA1-204ENST00000491881 MUC22E2RYF6 1773 aaPredicted RBP1.28□□□□□ -2.2
VTA1-204ENST00000491881 CHD5Q8TDI0 1954 aa1.28□□□□□ -2.2
VTA1-204ENST00000491881 NCKAP5O14513 1909 aa1.27□□□□□ -2.21
VTA1-204ENST00000491881 ANKRD31Q8N7Z5 1873 aa1.27□□□□□ -2.21
VTA1-204ENST00000491881 A0A1B0GW54 56 aa1.27□□□□□ -2.21
VTA1-204ENST00000491881 A8MUN3 132 aa1.27□□□□□ -2.21
VTA1-204ENST00000491881 PFDN6O15212 129 aa1.27□□□□□ -2.21
VTA1-204ENST00000491881 COCHO43405 550 aa1.27□□□□□ -2.21
VTA1-204ENST00000491881 NAPSAO96009 420 aa1.27□□□□□ -2.21
VTA1-204ENST00000491881 IL3P08700 152 aa1.27□□□□□ -2.21
VTA1-204ENST00000491881 ALDH3A1P30838 453 aa1.27□□□□□ -2.21
VTA1-204ENST00000491881 CA5AP35218 305 aa1.27□□□□□ -2.21
VTA1-204ENST00000491881 EMP1P54849 157 aa1.27□□□□□ -2.21
VTA1-204ENST00000491881 SAPCD1Q5SSQ6 148 aa1.27□□□□□ -2.21
VTA1-204ENST00000491881 FAM78BQ5VT40 261 aa1.27□□□□□ -2.21
VTA1-204ENST00000491881 TMEM42Q69YG0 159 aa1.27□□□□□ -2.21
VTA1-204ENST00000491881 SBSNQ6UWP8 590 aa1.27□□□□□ -2.21
VTA1-204ENST00000491881 OR1L8Q8NGR8 309 aa1.27□□□□□ -2.21
VTA1-204ENST00000491881 OR2T27Q8NH04 317 aa1.27□□□□□ -2.21
VTA1-204ENST00000491881 JOSD2Q8TAC2 188 aa1.27□□□□□ -2.21
VTA1-204ENST00000491881 EEF1AKMT1Q8WVE0 214 aa1.27□□□□□ -2.21
VTA1-204ENST00000491881 CCL13Q99616 98 aa1.27□□□□□ -2.21
VTA1-204ENST00000491881 DRC3Q9H069 523 aa1.27□□□□□ -2.21
VTA1-204ENST00000491881 HRASLSQ9HDD0 168 aa1.27□□□□□ -2.21
VTA1-204ENST00000491881 FKBP14Q9NWM8 211 aa1.27□□□□□ -2.21
VTA1-204ENST00000491881 DKKL1Q9UK85 242 aa1.27□□□□□ -2.21
VTA1-204ENST00000491881 POLR1DQ9Y2S0 133 aa1.27□□□□□ -2.21
VTA1-204ENST00000491881 AHNAK2Q8IVF2 5795 aa1.27□□□□□ -2.21
VTA1-204ENST00000491881 FLG2Q5D862 2391 aaPredicted RBP1.27□□□□□ -2.21
VTA1-204ENST00000491881 DSCAMO60469 2012 aa1.27□□□□□ -2.21
VTA1-204ENST00000491881 A0A0A6YYH2 397 aa1.26□□□□□ -2.21
VTA1-204ENST00000491881 A0A0J9YW62 118 aa1.26□□□□□ -2.21
VTA1-204ENST00000491881 TMEM269A0A1B0GVZ9 245 aa1.26□□□□□ -2.21
VTA1-204ENST00000491881 A6NJ64 397 aa1.26□□□□□ -2.21
VTA1-204ENST00000491881 PGLYRP1O75594 196 aaPredicted RBP1.26□□□□□ -2.21
VTA1-204ENST00000491881 APOMO95445 188 aa1.26□□□□□ -2.21
VTA1-204ENST00000491881 APOEP02649 317 aa1.26□□□□□ -2.21
VTA1-204ENST00000491881 C1QCP02747 245 aa1.26□□□□□ -2.21
VTA1-204ENST00000491881 TYMSP04818 313 aa1.26□□□□□ -2.21
VTA1-204ENST00000491881 PSMB8P28062 276 aa1.26□□□□□ -2.21
VTA1-204ENST00000491881 MED21Q13503 144 aa1.26□□□□□ -2.21
VTA1-204ENST00000491881 TMEM155Q4W5P6 130 aa1.26□□□□□ -2.21
VTA1-204ENST00000491881 KTN1-AS1Q86SY8 53 aa1.26□□□□□ -2.21
VTA1-204ENST00000491881 HAVCR2Q8TDQ0 301 aa1.26□□□□□ -2.21
VTA1-204ENST00000491881 GNPNAT1Q96EK6 184 aaPredicted RBP1.26□□□□□ -2.21
VTA1-204ENST00000491881 IMMP2LQ96T52 175 aa1.26□□□□□ -2.21
VTA1-204ENST00000491881 MAP1LC3AQ9H492 121 aa1.26□□□□□ -2.21
VTA1-204ENST00000491881 GREB1Q4ZG55 1949 aa1.26□□□□□ -2.21
VTA1-204ENST00000491881 HUWE1Q7Z6Z7 4374 aaKnown RBP1.25□□□□□ -2.21
VTA1-204ENST00000491881 ANKARQ7Z5J8 1434 aa1.25□□□□□ -2.21
VTA1-204ENST00000491881 MGAMO43451 1857 aa1.25□□□□□ -2.21
VTA1-204ENST00000491881 NAV1Q8NEY1 1877 aa1.25□□□□□ -2.21
VTA1-204ENST00000491881 NYNRINQ9P2P1 1898 aaKnown RBP1.25□□□□□ -2.21
VTA1-204ENST00000491881 COX7A2LO14548 114 aa1.25□□□□□ -2.21
VTA1-204ENST00000491881 ARL14EPLP0DKL9 152 aa1.25□□□□□ -2.21
VTA1-204ENST00000491881 MAP3K7CLP57077 242 aa1.25□□□□□ -2.21
VTA1-204ENST00000491881 TPI1P60174 286 aa1.25□□□□□ -2.21
VTA1-204ENST00000491881 RPL30P62888 115 aaKnown RBP1.25□□□□□ -2.21
VTA1-204ENST00000491881 LRRC75BQ2VPJ9 315 aa1.25□□□□□ -2.21
VTA1-204ENST00000491881 FAM201AQ5SY85 155 aa1.25□□□□□ -2.21
VTA1-204ENST00000491881 RNF133Q8WVZ7 376 aa1.25□□□□□ -2.21
VTA1-204ENST00000491881 ASB17Q8WXJ9 295 aa1.25□□□□□ -2.21
VTA1-204ENST00000491881 HDHD2Q9H0R4 259 aa1.25□□□□□ -2.21
VTA1-204ENST00000491881 CST9LQ9H4G1 147 aa1.25□□□□□ -2.21
VTA1-204ENST00000491881 CXorf21Q9HAI6 301 aa1.25□□□□□ -2.21
VTA1-204ENST00000491881 ABCA4P78363 2273 aa1.25□□□□□ -2.21
VTA1-204ENST00000491881 MYCBP2O75592 4640 aa1.24□□□□□ -2.21
VTA1-204ENST00000491881 MEIKINA0A087WXM9 373 aa1.24□□□□□ -2.21
VTA1-204ENST00000491881 TRAV38-1A0A0B4J264 116 aa1.24□□□□□ -2.21
VTA1-204ENST00000491881 HMSDA8MTL9 139 aa1.24□□□□□ -2.21
VTA1-204ENST00000491881 H3BT86 120 aa1.24□□□□□ -2.21
VTA1-204ENST00000491881 ZNF737O75373 536 aa1.24□□□□□ -2.21
VTA1-204ENST00000491881 HLA-DRAP01903 254 aa1.24□□□□□ -2.21
VTA1-204ENST00000491881 ANGP03950 147 aaKnown RBP1.24□□□□□ -2.21
VTA1-204ENST00000491881 REG1AP05451 166 aa1.24□□□□□ -2.21
VTA1-204ENST00000491881 TPM3P06753 285 aa1.24□□□□□ -2.21
VTA1-204ENST00000491881 ZNF705DP0CH99 300 aaPredicted RBP1.24□□□□□ -2.21
VTA1-204ENST00000491881 ZNF705BP0CI00 300 aaPredicted RBP1.24□□□□□ -2.21
VTA1-204ENST00000491881 BLVRAP53004 296 aa1.24□□□□□ -2.21
VTA1-204ENST00000491881 TPM4P67936 248 aa1.24□□□□□ -2.21
VTA1-204ENST00000491881 DMTNQ08495 405 aa1.24□□□□□ -2.21
VTA1-204ENST00000491881 C5orf46Q6UWT4 87 aa1.24□□□□□ -2.21
VTA1-204ENST00000491881 FAM151BQ6UXP7 276 aa1.24□□□□□ -2.21
VTA1-204ENST00000491881 COMMD7Q86VX2 200 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms