RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 THAP8Q8NA92 274 aa16.83■□□□□ 0.28
VCPKMT-204ENST00000491402 PARD6GQ9BYG4 376 aaPredicted RBP16.83■□□□□ 0.28
VCPKMT-204ENST00000491402 IGKV1D-37A0A075B6S9 117 aa16.82■□□□□ 0.28
VCPKMT-204ENST00000491402 ZFP92A6NM28 416 aa16.82■□□□□ 0.28
VCPKMT-204ENST00000491402 CD28P10747 220 aa16.82■□□□□ 0.28
VCPKMT-204ENST00000491402 GPR183P32249 361 aa16.82■□□□□ 0.28
VCPKMT-204ENST00000491402 ZNF343Q6P1L6 599 aa16.82■□□□□ 0.28
VCPKMT-204ENST00000491402 BTNL8Q6UX41 500 aa16.82■□□□□ 0.28
VCPKMT-204ENST00000491402 CLEC19AQ6UXS0 136 aa16.82■□□□□ 0.28
VCPKMT-204ENST00000491402 C12orf54Q6X4T0 127 aa16.82■□□□□ 0.28
VCPKMT-204ENST00000491402 C11orf44Q8N8P7 122 aa16.82■□□□□ 0.28
VCPKMT-204ENST00000491402 SCGB1C1Q8TD33 95 aa16.82■□□□□ 0.28
VCPKMT-204ENST00000491402 MPDU1O75352 247 aa16.82■□□□□ 0.28
VCPKMT-204ENST00000491402 CLEC3BP05452 202 aa16.82■□□□□ 0.28
VCPKMT-204ENST00000491402 IGLC1P0CG04 106 aa16.82■□□□□ 0.28
VCPKMT-204ENST00000491402 OR10J1P30954 320 aa16.82■□□□□ 0.28
VCPKMT-204ENST00000491402 KHDC1LQ5JSQ8 128 aa16.82■□□□□ 0.28
VCPKMT-204ENST00000491402 SLC51BQ86UW2 128 aa16.82■□□□□ 0.28
VCPKMT-204ENST00000491402 HSD17B11Q8NBQ5 300 aa16.82■□□□□ 0.28
VCPKMT-204ENST00000491402 ATP6V0BQ99437 205 aa16.82■□□□□ 0.28
VCPKMT-204ENST00000491402 MGST2Q99735 147 aa16.82■□□□□ 0.28
VCPKMT-204ENST00000491402 GNB4Q9HAV0 340 aa16.82■□□□□ 0.28
VCPKMT-204ENST00000491402 RUNX1Q01196 453 aa16.81■□□□□ 0.28
VCPKMT-204ENST00000491402 STOML3Q8TAV4 291 aa16.81■□□□□ 0.28
VCPKMT-204ENST00000491402 OR5B12Q96R08 314 aa16.81■□□□□ 0.28
VCPKMT-204ENST00000491402 NPCDR1Q9BY65 106 aa16.81■□□□□ 0.28
VCPKMT-204ENST00000491402 GAR1Q9NY12 217 aaKnown RBP16.81■□□□□ 0.28
VCPKMT-204ENST00000491402 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.8■□□□□ 0.28
VCPKMT-204ENST00000491402 CDX1P47902 265 aaPredicted RBP16.8■□□□□ 0.28
VCPKMT-204ENST00000491402 KRTAP10-3P60369 221 aa16.8■□□□□ 0.28
VCPKMT-204ENST00000491402 HIST2H2BDQ6DRA6 164 aa16.8■□□□□ 0.28
VCPKMT-204ENST00000491402 WFDC12Q8WWY7 111 aa16.8■□□□□ 0.28
VCPKMT-204ENST00000491402 RSG1Q9BU20 258 aa16.8■□□□□ 0.28
VCPKMT-204ENST00000491402 TRAV30A0A087WSZ9 112 aa16.79■□□□□ 0.28
VCPKMT-204ENST00000491402 TCRBV4S1A1TA0A5B7 111 aa16.79■□□□□ 0.28
VCPKMT-204ENST00000491402 AGPAT2O15120 278 aa16.79■□□□□ 0.28
VCPKMT-204ENST00000491402 IGKV1-17P01599 117 aa16.79■□□□□ 0.28
VCPKMT-204ENST00000491402 TRBV12-3P01733 135 aa16.79■□□□□ 0.28
VCPKMT-204ENST00000491402 CTSGP08311 255 aa16.79■□□□□ 0.28
VCPKMT-204ENST00000491402 C3orf56Q8N813 242 aa16.79■□□□□ 0.28
VCPKMT-204ENST00000491402 TRGV9Q99603 122 aa16.79■□□□□ 0.28
VCPKMT-204ENST00000491402 ARV1Q9H2C2 271 aa16.79■□□□□ 0.28
VCPKMT-204ENST00000491402 ANKRD34BA5PLL1 514 aa16.79■□□□□ 0.28
VCPKMT-204ENST00000491402 NUPL2O15504 423 aaKnown RBP16.79■□□□□ 0.28
VCPKMT-204ENST00000491402 TPT1P13693 172 aaKnown RBP16.79■□□□□ 0.28
VCPKMT-204ENST00000491402 CAMLGP49069 296 aa16.79■□□□□ 0.28
VCPKMT-204ENST00000491402 ZNF90Q03938 601 aa16.79■□□□□ 0.28
VCPKMT-204ENST00000491402 RAB31Q13636 194 aa16.79■□□□□ 0.28
VCPKMT-204ENST00000491402 CITED2Q99967 270 aaPredicted RBP16.79■□□□□ 0.28
VCPKMT-204ENST00000491402 GINS3Q9BRX5 216 aa16.79■□□□□ 0.28
VCPKMT-204ENST00000491402 CHRDL1Q9BU40 450 aa16.79■□□□□ 0.28
VCPKMT-204ENST00000491402 GGTLC1Q9BX51 225 aa16.79■□□□□ 0.28
VCPKMT-204ENST00000491402 PPP5D1E7EU14 171 aa16.78■□□□□ 0.28
VCPKMT-204ENST00000491402 TGOLN2O43493 480 aa16.78■□□□□ 0.28
VCPKMT-204ENST00000491402 LGALS1P09382 135 aaKnown RBP16.78■□□□□ 0.28
VCPKMT-204ENST00000491402 ATP6V0CP27449 155 aa16.78■□□□□ 0.28
VCPKMT-204ENST00000491402 ADMP35318 185 aa16.78■□□□□ 0.28
VCPKMT-204ENST00000491402 EIF5AP63241 154 aaKnown RBP16.78■□□□□ 0.28
VCPKMT-204ENST00000491402 TIGITQ495A1 244 aa16.78■□□□□ 0.28
VCPKMT-204ENST00000491402 FAM209BQ5JX69 171 aa16.78■□□□□ 0.28
VCPKMT-204ENST00000491402 BAP18Q8IXM2 172 aa16.78■□□□□ 0.28
VCPKMT-204ENST00000491402 ST8SIA2Q92186 375 aa16.78■□□□□ 0.28
VCPKMT-204ENST00000491402 SCGB2A1O75556 95 aa16.77■□□□□ 0.28
VCPKMT-204ENST00000491402 C18orf65Q6ZTR6 163 aa16.77■□□□□ 0.28
VCPKMT-204ENST00000491402 C4orf3Q8WVX3 66 aa16.77■□□□□ 0.28
VCPKMT-204ENST00000491402 SH3BGRL3Q9H299 93 aa16.77■□□□□ 0.28
VCPKMT-204ENST00000491402 PEF1Q9UBV8 284 aaKnown RBP16.77■□□□□ 0.28
VCPKMT-204ENST00000491402 I3L521 148 aa16.77■□□□□ 0.27
VCPKMT-204ENST00000491402 ARL3P36405 182 aa16.77■□□□□ 0.27
VCPKMT-204ENST00000491402 SPSB3Q6PJ21 355 aa16.77■□□□□ 0.27
VCPKMT-204ENST00000491402 CYP2G1PQ6ZSU1 146 aa16.77■□□□□ 0.27
VCPKMT-204ENST00000491402 ZNF709Q8N972 641 aa16.77■□□□□ 0.27
VCPKMT-204ENST00000491402 TSSC4Q9Y5U2 329 aaPredicted RBP16.77■□□□□ 0.27
VCPKMT-204ENST00000491402 RFNGQ9Y644 331 aa16.77■□□□□ 0.27
VCPKMT-204ENST00000491402 TMEM182Q6ZP80 229 aaPredicted RBP16.76■□□□□ 0.27
VCPKMT-204ENST00000491402 KLHL30-AS1Q8NEE0 82 aa16.76■□□□□ 0.27
VCPKMT-204ENST00000491402 GNPNAT1Q96EK6 184 aaPredicted RBP16.76■□□□□ 0.27
VCPKMT-204ENST00000491402 SLC45A2Q9UMX9 530 aa16.76■□□□□ 0.27
VCPKMT-204ENST00000491402 C17orf112F2Z3M2 114 aa16.75■□□□□ 0.27
VCPKMT-204ENST00000491402 GATA2P23769 480 aaPredicted RBP16.75■□□□□ 0.27
VCPKMT-204ENST00000491402 BPIFCQ8NFQ6 507 aa16.75■□□□□ 0.27
VCPKMT-204ENST00000491402 ZNF747Q9BV97 191 aa16.75■□□□□ 0.27
VCPKMT-204ENST00000491402 SLC25A32Q9H2D1 315 aa16.75■□□□□ 0.27
VCPKMT-204ENST00000491402 TIMM9Q9Y5J7 89 aa16.75■□□□□ 0.27
VCPKMT-204ENST00000491402 BMPR1BO00238 502 aa16.74■□□□□ 0.27
VCPKMT-204ENST00000491402 SPP1P10451 314 aa16.74■□□□□ 0.27
VCPKMT-204ENST00000491402 RPL29P47914 159 aaKnown RBP16.74■□□□□ 0.27
VCPKMT-204ENST00000491402 YPEL3P61236 119 aaPredicted RBP16.74■□□□□ 0.27
VCPKMT-204ENST00000491402 SELENOTP62341 195 aa16.74■□□□□ 0.27
VCPKMT-204ENST00000491402 MIC13Q5XKP0 118 aa16.74■□□□□ 0.27
VCPKMT-204ENST00000491402 STPG3Q8N7X2 389 aa16.74■□□□□ 0.27
VCPKMT-204ENST00000491402 PSMG3Q9BT73 122 aaPredicted RBP16.74■□□□□ 0.27
VCPKMT-204ENST00000491402 IGHV3-35A0A0C4DH35 117 aa16.74■□□□□ 0.27
VCPKMT-204ENST00000491402 A0A1W2PRX2 142 aa16.74■□□□□ 0.27
VCPKMT-204ENST00000491402 NUDT19A8MXV4 375 aa16.74■□□□□ 0.27
VCPKMT-204ENST00000491402 PSG1P11464 419 aa16.74■□□□□ 0.27
VCPKMT-204ENST00000491402 PRR20EP86478 221 aa16.74■□□□□ 0.27
VCPKMT-204ENST00000491402 PRR20CP86479 221 aa16.74■□□□□ 0.27
VCPKMT-204ENST00000491402 PRR20DP86480 221 aa16.74■□□□□ 0.27
VCPKMT-204ENST00000491402 PRR20BP86481 221 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms