RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 OR4A16Q8NH70 328 aa6.15□□□□□ -1.42
APOBEC3F-204ENST00000491387 CHAC2Q8WUX2 184 aa6.15□□□□□ -1.42
APOBEC3F-204ENST00000491387 RTBDNQ9BSG5 229 aaPredicted RBP6.15□□□□□ -1.42
APOBEC3F-204ENST00000491387 FNDC4Q9H6D8 234 aaPredicted RBP6.15□□□□□ -1.42
APOBEC3F-204ENST00000491387 C3orf85A0A1B0GTC6 90 aa6.14□□□□□ -1.43
APOBEC3F-204ENST00000491387 ANKRD20A5PA0PJZ0 165 aa6.14□□□□□ -1.43
APOBEC3F-204ENST00000491387 NAP1L6A6NFF2 107 aa6.14□□□□□ -1.43
APOBEC3F-204ENST00000491387 ZNF705EA8MWA4 302 aaPredicted RBP6.14□□□□□ -1.43
APOBEC3F-204ENST00000491387 INS-IGF2F8WCM5 200 aa6.14□□□□□ -1.43
APOBEC3F-204ENST00000491387 RAB3DO95716 219 aa6.14□□□□□ -1.43
APOBEC3F-204ENST00000491387 CA1P00915 261 aaPredicted RBP6.14□□□□□ -1.43
APOBEC3F-204ENST00000491387 GIG44P09565 113 aaPredicted RBP6.14□□□□□ -1.43
APOBEC3F-204ENST00000491387 OR5AC1P0C628 307 aa6.14□□□□□ -1.43
APOBEC3F-204ENST00000491387 RNASE2P10153 161 aaKnown RBP6.14□□□□□ -1.43
APOBEC3F-204ENST00000491387 BTCP35070 178 aa6.14□□□□□ -1.43
APOBEC3F-204ENST00000491387 HSPE1P61604 102 aaKnown RBP6.14□□□□□ -1.43
APOBEC3F-204ENST00000491387 SSBP1Q04837 148 aaKnown RBP6.14□□□□□ -1.43
APOBEC3F-204ENST00000491387 PVRIGQ6DKI7 326 aa6.14□□□□□ -1.43
APOBEC3F-204ENST00000491387 STEAP1BQ6NZ63 245 aa6.14□□□□□ -1.43
APOBEC3F-204ENST00000491387 GBGT1Q8N5D6 347 aa6.14□□□□□ -1.43
APOBEC3F-204ENST00000491387 TMEM229BQ8NBD8 167 aa6.14□□□□□ -1.43
APOBEC3F-204ENST00000491387 TMEM170AQ8WVE7 144 aa6.14□□□□□ -1.43
APOBEC3F-204ENST00000491387 DEDD2Q8WXF8 326 aa6.14□□□□□ -1.43
APOBEC3F-204ENST00000491387 TMEM230Q96A57 120 aa6.14□□□□□ -1.43
APOBEC3F-204ENST00000491387 GINS3Q9BRX5 216 aa6.14□□□□□ -1.43
APOBEC3F-204ENST00000491387 ZFAND3Q9H8U3 227 aa6.14□□□□□ -1.43
APOBEC3F-204ENST00000491387 COPZ2Q9P299 210 aa6.14□□□□□ -1.43
APOBEC3F-204ENST00000491387 FBXL17Q9UF56 701 aa6.14□□□□□ -1.43
APOBEC3F-204ENST00000491387 DNAH11Q96DT5 4516 aa6.13□□□□□ -1.43
APOBEC3F-204ENST00000491387 A0A1B0GU03 582 aa6.13□□□□□ -1.43
APOBEC3F-204ENST00000491387 A0A1B0GVY2 172 aa6.13□□□□□ -1.43
APOBEC3F-204ENST00000491387 YIF1AO95070 293 aa6.13□□□□□ -1.43
APOBEC3F-204ENST00000491387 HNRNPCP07910 306 aaKnown RBP eCLIP6.13□□□□□ -1.43
APOBEC3F-204ENST00000491387 MIFP14174 115 aa6.13□□□□□ -1.43
APOBEC3F-204ENST00000491387 UCP1P25874 307 aa6.13□□□□□ -1.43
APOBEC3F-204ENST00000491387 AKR1C2P52895 323 aa6.13□□□□□ -1.43
APOBEC3F-204ENST00000491387 TAS2R19P59542 299 aa6.13□□□□□ -1.43
APOBEC3F-204ENST00000491387 TOMM20LQ6UXN7 152 aa6.13□□□□□ -1.43
APOBEC3F-204ENST00000491387 TCF24Q7RTU0 167 aa6.13□□□□□ -1.43
APOBEC3F-204ENST00000491387 ARRDC1Q8N5I2 433 aa6.13□□□□□ -1.43
APOBEC3F-204ENST00000491387 OR51S1Q8NGJ8 323 aa6.13□□□□□ -1.43
APOBEC3F-204ENST00000491387 ST8SIA2Q92186 375 aa6.13□□□□□ -1.43
APOBEC3F-204ENST00000491387 MARVELD1Q9BSK0 173 aa6.13□□□□□ -1.43
APOBEC3F-204ENST00000491387 MS4A6AQ9H2W1 248 aa6.13□□□□□ -1.43
APOBEC3F-204ENST00000491387 PKD1P98161 4303 aa6.13□□□□□ -1.43
APOBEC3F-204ENST00000491387 TRAV10A0A0B4J240 114 aa6.12□□□□□ -1.43
APOBEC3F-204ENST00000491387 IGLL5B9A064 214 aa6.12□□□□□ -1.43
APOBEC3F-204ENST00000491387 INMT-MINDY4F8WBC2 141 aa6.12□□□□□ -1.43
APOBEC3F-204ENST00000491387 GNG7O60262 68 aa6.12□□□□□ -1.43
APOBEC3F-204ENST00000491387 TCRBP04435 133 aa6.12□□□□□ -1.43
APOBEC3F-204ENST00000491387 RBMY1A1P0DJD3 496 aaKnown RBP6.12□□□□□ -1.43
APOBEC3F-204ENST00000491387 RBMY1CP0DJD4 496 aa6.12□□□□□ -1.43
APOBEC3F-204ENST00000491387 MED14OSP0DP75 135 aa6.12□□□□□ -1.43
APOBEC3F-204ENST00000491387 SPP1P10451 314 aa6.12□□□□□ -1.43
APOBEC3F-204ENST00000491387 FAUP35544 74 aaKnown RBP6.12□□□□□ -1.43
APOBEC3F-204ENST00000491387 NPBWR1P48145 328 aa6.12□□□□□ -1.43
APOBEC3F-204ENST00000491387 DEFB131AP59861 70 aa6.12□□□□□ -1.43
APOBEC3F-204ENST00000491387 RBMY1FQ15415 496 aaKnown RBP6.12□□□□□ -1.43
APOBEC3F-204ENST00000491387 LPCAT3Q6P1A2 487 aa6.12□□□□□ -1.43
APOBEC3F-204ENST00000491387 MORN3Q6PF18 240 aaPredicted RBP6.12□□□□□ -1.43
APOBEC3F-204ENST00000491387 ZNF600Q6ZNG1 722 aa6.12□□□□□ -1.43
APOBEC3F-204ENST00000491387 TRPT1Q86TN4 253 aaKnown RBP6.12□□□□□ -1.43
APOBEC3F-204ENST00000491387 AKAP14Q86UN6 197 aa6.12□□□□□ -1.43
APOBEC3F-204ENST00000491387 SELENOHQ8IZQ5 122 aaKnown RBP6.12□□□□□ -1.43
APOBEC3F-204ENST00000491387 TERB2Q8NHR7 220 aa6.12□□□□□ -1.43
APOBEC3F-204ENST00000491387 GLYATL2Q8WU03 294 aa6.12□□□□□ -1.43
APOBEC3F-204ENST00000491387 GPR146Q96CH1 333 aa6.12□□□□□ -1.43
APOBEC3F-204ENST00000491387 GRAMD2BQ96HH9 432 aa6.12□□□□□ -1.43
APOBEC3F-204ENST00000491387 RNF126Q9BV68 326 aa6.12□□□□□ -1.43
APOBEC3F-204ENST00000491387 PKHD1P08F94 4074 aa6.12□□□□□ -1.43
APOBEC3F-204ENST00000491387 IGHV4-28A0A0C4DH34 117 aa6.11□□□□□ -1.43
APOBEC3F-204ENST00000491387 CRYM-AS1A6NIL9 109 aa6.11□□□□□ -1.43
APOBEC3F-204ENST00000491387 BOLA2-SMG1P6H3BVE0 249 aa6.11□□□□□ -1.43
APOBEC3F-204ENST00000491387 K7EQG2 157 aa6.11□□□□□ -1.43
APOBEC3F-204ENST00000491387 DNASE2O00115 360 aaPredicted RBP6.11□□□□□ -1.43
APOBEC3F-204ENST00000491387 DEFB4AO15263 64 aa6.11□□□□□ -1.43
APOBEC3F-204ENST00000491387 TMEM50AO95807 157 aa6.11□□□□□ -1.43
APOBEC3F-204ENST00000491387 IFNA17P01571 189 aa6.11□□□□□ -1.43
APOBEC3F-204ENST00000491387 AMBPP02760 352 aa6.11□□□□□ -1.43
APOBEC3F-204ENST00000491387 AKAIN1P0CW23 69 aa6.11□□□□□ -1.43
APOBEC3F-204ENST00000491387 HLA-DMBP28068 263 aa6.11□□□□□ -1.43
APOBEC3F-204ENST00000491387 HOXA1P49639 335 aaPredicted RBP6.11□□□□□ -1.43
APOBEC3F-204ENST00000491387 CCR6P51684 374 aa6.11□□□□□ -1.43
APOBEC3F-204ENST00000491387 SUPT4H1P63272 117 aaKnown RBP6.11□□□□□ -1.43
APOBEC3F-204ENST00000491387 ERHP84090 104 aaKnown RBP6.11□□□□□ -1.43
APOBEC3F-204ENST00000491387 TIGITQ495A1 244 aa6.11□□□□□ -1.43
APOBEC3F-204ENST00000491387 TMEM268Q5VZI3 342 aa6.11□□□□□ -1.43
APOBEC3F-204ENST00000491387 FAM219AQ8IW50 185 aa6.11□□□□□ -1.43
APOBEC3F-204ENST00000491387 SLC35G3Q8N808 338 aa6.11□□□□□ -1.43
APOBEC3F-204ENST00000491387 CSNK1G2-AS1Q8NCQ2 148 aa6.11□□□□□ -1.43
APOBEC3F-204ENST00000491387 ZNF486Q96H40 463 aaPredicted RBP6.11□□□□□ -1.43
APOBEC3F-204ENST00000491387 TMEM222Q9H0R3 208 aa6.11□□□□□ -1.43
APOBEC3F-204ENST00000491387 TMEM231Q9H6L2 316 aa6.11□□□□□ -1.43
APOBEC3F-204ENST00000491387 NAA60Q9H7X0 242 aa6.11□□□□□ -1.43
APOBEC3F-204ENST00000491387 NUDT15Q9NV35 164 aa6.11□□□□□ -1.43
APOBEC3F-204ENST00000491387 CACNG5Q9UF02 275 aa6.11□□□□□ -1.43
APOBEC3F-204ENST00000491387 GPR132Q9UNW8 380 aa6.11□□□□□ -1.43
APOBEC3F-204ENST00000491387 PUS1Q9Y606 427 aaKnown RBP eCLIP6.11□□□□□ -1.43
APOBEC3F-204ENST00000491387 ALG5Q9Y673 324 aa6.11□□□□□ -1.43
APOBEC3F-204ENST00000491387 X6R8D5 127 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms