RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 MPDU1O75352 247 aa10.94□□□□□ -0.66
SMPD4-219ENST00000491128 NDUFB8O95169 186 aa10.94□□□□□ -0.66
SMPD4-219ENST00000491128 PRR20EP86478 221 aa10.94□□□□□ -0.66
SMPD4-219ENST00000491128 PRR20CP86479 221 aa10.94□□□□□ -0.66
SMPD4-219ENST00000491128 PRR20DP86480 221 aa10.94□□□□□ -0.66
SMPD4-219ENST00000491128 PRR20BP86481 221 aa10.94□□□□□ -0.66
SMPD4-219ENST00000491128 PRR20AP86496 221 aa10.94□□□□□ -0.66
SMPD4-219ENST00000491128 FLI1Q01543 452 aaPredicted RBP10.94□□□□□ -0.66
SMPD4-219ENST00000491128 SPNS3Q6ZMD2 512 aa10.94□□□□□ -0.66
SMPD4-219ENST00000491128 MRPL41Q8IXM3 137 aaKnown RBP10.94□□□□□ -0.66
SMPD4-219ENST00000491128 IGHV3OR16-8A0A075B7F1 116 aa10.93□□□□□ -0.66
SMPD4-219ENST00000491128 TRAV5A0A0B4J249 113 aa10.93□□□□□ -0.66
SMPD4-219ENST00000491128 HSPB1P04792 205 aaKnown RBP10.93□□□□□ -0.66
SMPD4-219ENST00000491128 FAM78BQ5VT40 261 aa10.93□□□□□ -0.66
SMPD4-219ENST00000491128 LCNL1Q6ZST4 164 aa10.93□□□□□ -0.66
SMPD4-219ENST00000491128 MIR17HGQ75NE6 70 aa10.93□□□□□ -0.66
SMPD4-219ENST00000491128 LURAP1LQ8IV03 231 aa10.93□□□□□ -0.66
SMPD4-219ENST00000491128 TMEM37Q8WXS4 190 aa10.93□□□□□ -0.66
SMPD4-219ENST00000491128 TMEM218A2RU14 115 aa10.93□□□□□ -0.66
SMPD4-219ENST00000491128 A6NDX4 124 aa10.93□□□□□ -0.66
SMPD4-219ENST00000491128 J3QLI3 93 aa10.93□□□□□ -0.66
SMPD4-219ENST00000491128 SFTA3P0C7M3 94 aa10.93□□□□□ -0.66
SMPD4-219ENST00000491128 ORM2P19652 201 aa10.93□□□□□ -0.66
SMPD4-219ENST00000491128 RPL29P47914 159 aaKnown RBP10.93□□□□□ -0.66
SMPD4-219ENST00000491128 ATP5IP56385 69 aaPredicted RBP10.93□□□□□ -0.66
SMPD4-219ENST00000491128 UBE2G2P60604 165 aa10.93□□□□□ -0.66
SMPD4-219ENST00000491128 CYP2G1PQ6ZSU1 146 aa10.93□□□□□ -0.66
SMPD4-219ENST00000491128 ACTR3CQ9C0K3 210 aaPredicted RBP10.93□□□□□ -0.66
SMPD4-219ENST00000491128 RBFOX3A6NFN3 312 aa10.92□□□□□ -0.66
SMPD4-219ENST00000491128 CYB5BO43169 146 aa10.92□□□□□ -0.66
SMPD4-219ENST00000491128 CD5P06127 495 aa10.92□□□□□ -0.66
SMPD4-219ENST00000491128 CRYGCP07315 174 aa10.92□□□□□ -0.66
SMPD4-219ENST00000491128 TIGITQ495A1 244 aa10.92□□□□□ -0.66
SMPD4-219ENST00000491128 SGMS2Q8NHU3 365 aa10.92□□□□□ -0.66
SMPD4-219ENST00000491128 SETD2Q9BYW2 2564 aaPredicted RBP10.92□□□□□ -0.66
SMPD4-219ENST00000491128 ANK3Q12955 4377 aaKnown RBP10.92□□□□□ -0.66
SMPD4-219ENST00000491128 CTXND1A0A1B0GTU2 59 aa10.92□□□□□ -0.66
SMPD4-219ENST00000491128 F8W036 122 aa10.92□□□□□ -0.66
SMPD4-219ENST00000491128 SCAF4O95104 1147 aaKnown RBP10.92□□□□□ -0.66
SMPD4-219ENST00000491128 GUCA2BQ16661 112 aa10.92□□□□□ -0.66
SMPD4-219ENST00000491128 PVRIGQ6DKI7 326 aa10.92□□□□□ -0.66
SMPD4-219ENST00000491128 TTC9CQ8N5M4 171 aa10.92□□□□□ -0.66
SMPD4-219ENST00000491128 MBD3L1Q8WWY6 194 aa10.92□□□□□ -0.66
SMPD4-219ENST00000491128 IGLV11-55A0A075B6I3 123 aa10.91□□□□□ -0.66
SMPD4-219ENST00000491128 HOXA3O43365 443 aaPredicted RBP10.91□□□□□ -0.66
SMPD4-219ENST00000491128 MBP02144 154 aa10.91□□□□□ -0.66
SMPD4-219ENST00000491128 ARL14EPLP0DKL9 152 aa10.91□□□□□ -0.66
SMPD4-219ENST00000491128 DPPA3Q6W0C5 159 aa10.91□□□□□ -0.66
SMPD4-219ENST00000491128 TCRBV4S1A1TA0A5B7 111 aa10.91□□□□□ -0.66
SMPD4-219ENST00000491128 OR5G3P0C626 314 aa10.91□□□□□ -0.66
SMPD4-219ENST00000491128 IER3P46695 156 aa10.91□□□□□ -0.66
SMPD4-219ENST00000491128 AKIRIN2Q53H80 203 aa10.91□□□□□ -0.66
SMPD4-219ENST00000491128 LEMD1Q68G75 181 aa10.91□□□□□ -0.66
SMPD4-219ENST00000491128 TMEM116Q8NCL8 245 aa10.91□□□□□ -0.66
SMPD4-219ENST00000491128 OR1B1Q8NGR6 318 aa10.91□□□□□ -0.66
SMPD4-219ENST00000491128 OR4X1Q8NH49 305 aa10.91□□□□□ -0.66
SMPD4-219ENST00000491128 PBDC1Q9BVG4 233 aa10.91□□□□□ -0.66
SMPD4-219ENST00000491128 FBXL7Q9UJT9 491 aa10.91□□□□□ -0.66
SMPD4-219ENST00000491128 OR2T8A6NH00 312 aa10.9□□□□□ -0.66
SMPD4-219ENST00000491128 NPIPB5A8MRT5 1133 aa10.9□□□□□ -0.66
SMPD4-219ENST00000491128 OR10J4P0C629 311 aa10.9□□□□□ -0.66
SMPD4-219ENST00000491128 RPL35P42766 123 aaKnown RBP10.9□□□□□ -0.66
SMPD4-219ENST00000491128 ICAM4Q14773 271 aa10.9□□□□□ -0.66
SMPD4-219ENST00000491128 PATE2Q6UY27 113 aa10.9□□□□□ -0.66
SMPD4-219ENST00000491128 Q71RC1 249 aaPredicted RBP10.9□□□□□ -0.66
SMPD4-219ENST00000491128 FOXC2Q99958 501 aa10.9□□□□□ -0.66
SMPD4-219ENST00000491128 FNDC10F2Z333 226 aa10.9□□□□□ -0.66
SMPD4-219ENST00000491128 FSHBP01225 129 aa10.9□□□□□ -0.66
SMPD4-219ENST00000491128 IGLC1P0CG04 106 aa10.9□□□□□ -0.66
SMPD4-219ENST00000491128 PRB4P10163 310 aaPredicted RBP10.9□□□□□ -0.66
SMPD4-219ENST00000491128 PSG1P11464 419 aa10.9□□□□□ -0.66
SMPD4-219ENST00000491128 ETFRF1Q6IPR1 90 aa10.9□□□□□ -0.66
SMPD4-219ENST00000491128 ZNF329Q86UD4 541 aa10.9□□□□□ -0.66
SMPD4-219ENST00000491128 LINC00469Q8N7U9 141 aa10.9□□□□□ -0.66
SMPD4-219ENST00000491128 IGKV1-17P01599 117 aa10.89□□□□□ -0.67
SMPD4-219ENST00000491128 KRTAP1-1Q07627 177 aa10.89□□□□□ -0.67
SMPD4-219ENST00000491128 C15orf32Q32M92 178 aa10.89□□□□□ -0.67
SMPD4-219ENST00000491128 Q56UQ5 140 aa10.89□□□□□ -0.67
SMPD4-219ENST00000491128 UQCC3Q6UW78 93 aa10.89□□□□□ -0.67
SMPD4-219ENST00000491128 C10orf99Q6UWK7 81 aa10.89□□□□□ -0.67
SMPD4-219ENST00000491128 NKX6-2Q9C056 277 aaPredicted RBP10.89□□□□□ -0.67
SMPD4-219ENST00000491128 YAE1D1Q9NRH1 226 aa10.89□□□□□ -0.67
SMPD4-219ENST00000491128 F8W735 103 aaPredicted RBP10.89□□□□□ -0.67
SMPD4-219ENST00000491128 CORTO00230 105 aa10.89□□□□□ -0.67
SMPD4-219ENST00000491128 PAGE4O60829 102 aa10.89□□□□□ -0.67
SMPD4-219ENST00000491128 HBE1P02100 147 aa10.89□□□□□ -0.67
SMPD4-219ENST00000491128 RHOGP84095 191 aa10.89□□□□□ -0.67
SMPD4-219ENST00000491128 SLC35E3Q7Z769 313 aa10.89□□□□□ -0.67
SMPD4-219ENST00000491128 THAP8Q8NA92 274 aa10.89□□□□□ -0.67
SMPD4-219ENST00000491128 C12orf57Q99622 126 aa10.89□□□□□ -0.67
SMPD4-219ENST00000491128 SRSF8Q9BRL6 282 aaKnown RBP10.89□□□□□ -0.67
SMPD4-219ENST00000491128 C20orf24Q9BUV8 137 aa10.89□□□□□ -0.67
SMPD4-219ENST00000491128 TRAV41A0A0B4J266 112 aa10.88□□□□□ -0.67
SMPD4-219ENST00000491128 LYZP61626 148 aa10.88□□□□□ -0.67
SMPD4-219ENST00000491128 HIST2H2BDQ6DRA6 164 aa10.88□□□□□ -0.67
SMPD4-219ENST00000491128 CYB561D1Q8N8Q1 229 aa10.88□□□□□ -0.67
SMPD4-219ENST00000491128 TRAV1-1A0A0B4J248 108 aa10.88□□□□□ -0.67
SMPD4-219ENST00000491128 SEC14L6B5MCN3 397 aa10.88□□□□□ -0.67
SMPD4-219ENST00000491128 GNG7O60262 68 aa10.88□□□□□ -0.67
SMPD4-219ENST00000491128 AKR1D1P51857 326 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms