RNA–Protein interactions for RNA: ENST00000490953.5

SBDS-204, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 1 (best)

Gene SBDS, Length 841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-204ENST00000490953 KLF9Q13886 244 aaPredicted RBP13.47□□□□□ -0.25
SBDS-204ENST00000490953 SMCO1Q147U7 214 aa13.47□□□□□ -0.25
SBDS-204ENST00000490953 PRSS54Q6PEW0 395 aa13.47□□□□□ -0.25
SBDS-204ENST00000490953 LYZL2Q7Z4W2 148 aa13.47□□□□□ -0.25
SBDS-204ENST00000490953 LGI3Q8N145 548 aa13.47□□□□□ -0.25
SBDS-204ENST00000490953 TOMM5Q8N4H5 51 aa13.47□□□□□ -0.25
SBDS-204ENST00000490953 OR1S2Q8NGQ3 325 aa13.47□□□□□ -0.25
SBDS-204ENST00000490953 NARS2Q96I59 477 aaKnown RBP13.47□□□□□ -0.25
SBDS-204ENST00000490953 SHPKQ9UHJ6 478 aa13.47□□□□□ -0.25
SBDS-204ENST00000490953 RABAC1Q9UI14 185 aa13.47□□□□□ -0.25
SBDS-204ENST00000490953 TRAV2A0A0B4J234 112 aa13.46□□□□□ -0.25
SBDS-204ENST00000490953 IGLC1P0CG04 106 aa13.46□□□□□ -0.25
SBDS-204ENST00000490953 CRYBB3P26998 211 aa13.46□□□□□ -0.25
SBDS-204ENST00000490953 OR10J1P30954 320 aa13.46□□□□□ -0.25
SBDS-204ENST00000490953 S100A5P33763 92 aa13.46□□□□□ -0.25
SBDS-204ENST00000490953 TNFRSF9Q07011 255 aa13.46□□□□□ -0.25
SBDS-204ENST00000490953 PMS2P11Q13670 270 aa13.46□□□□□ -0.25
SBDS-204ENST00000490953 NMSQ5H8A3 153 aa13.46□□□□□ -0.25
SBDS-204ENST00000490953 ETFRF1Q6IPR1 90 aa13.46□□□□□ -0.25
SBDS-204ENST00000490953 TMED4Q7Z7H5 227 aa13.46□□□□□ -0.25
SBDS-204ENST00000490953 NOXA1Q86UR1 476 aa13.46□□□□□ -0.25
SBDS-204ENST00000490953 TMEM170AQ8WVE7 144 aa13.46□□□□□ -0.25
SBDS-204ENST00000490953 LYSTQ99698 3801 aa13.46□□□□□ -0.25
SBDS-204ENST00000490953 CSTL1Q9H114 145 aa13.46□□□□□ -0.25
SBDS-204ENST00000490953 V9GYH0 126 aa13.46□□□□□ -0.25
SBDS-204ENST00000490953 CXorf65A6NEN9 183 aa13.45□□□□□ -0.26
SBDS-204ENST00000490953 MPTX1A8MV57 137 aa13.45□□□□□ -0.26
SBDS-204ENST00000490953 IFNA10P01566 189 aa13.45□□□□□ -0.26
SBDS-204ENST00000490953 P2RY1P47900 373 aa13.45□□□□□ -0.26
SBDS-204ENST00000490953 DEFB131AP59861 70 aa13.45□□□□□ -0.26
SBDS-204ENST00000490953 LEMD1Q68G75 181 aa13.45□□□□□ -0.26
SBDS-204ENST00000490953 FAM24BQ8N5W8 94 aa13.45□□□□□ -0.26
SBDS-204ENST00000490953 STXBP6Q8NFX7 210 aa13.45□□□□□ -0.26
SBDS-204ENST00000490953 DTD1Q8TEA8 209 aa13.45□□□□□ -0.26
SBDS-204ENST00000490953 Q8WTZ3 238 aa13.45□□□□□ -0.26
SBDS-204ENST00000490953 RBKSQ9H477 322 aa13.45□□□□□ -0.26
SBDS-204ENST00000490953 HSPB7Q9UBY9 170 aa13.45□□□□□ -0.26
SBDS-204ENST00000490953 RYR2Q92736 4967 aa13.45□□□□□ -0.26
SBDS-204ENST00000490953 EWSR1Q01844 656 aaKnown RBP eCLIP13.44□□□□□ -0.26
SBDS-204ENST00000490953 RBMS2Q15434 407 aaKnown RBP13.44□□□□□ -0.26
SBDS-204ENST00000490953 ZNF79Q15937 498 aa13.44□□□□□ -0.26
SBDS-204ENST00000490953 OR1S1Q8NH92 325 aa13.44□□□□□ -0.26
SBDS-204ENST00000490953 ACY3Q96HD9 319 aa13.44□□□□□ -0.26
SBDS-204ENST00000490953 GRAMD2BQ96HH9 432 aa13.44□□□□□ -0.26
SBDS-204ENST00000490953 PIGBOS1A0A0B4J2F0 54 aa13.43□□□□□ -0.26
SBDS-204ENST00000490953 YPEL3P61236 119 aaPredicted RBP13.43□□□□□ -0.26
SBDS-204ENST00000490953 NPIPB3Q92617 1050 aa13.43□□□□□ -0.26
SBDS-204ENST00000490953 U3KQ87 197 aa13.43□□□□□ -0.26
SBDS-204ENST00000490953 DUXBA0A1W2PPF3 345 aa13.42□□□□□ -0.26
SBDS-204ENST00000490953 K7EQG2 157 aa13.42□□□□□ -0.26
SBDS-204ENST00000490953 HNRNPCP07910 306 aaKnown RBP eCLIP13.42□□□□□ -0.26
SBDS-204ENST00000490953 VAMP1P23763 118 aa13.42□□□□□ -0.26
SBDS-204ENST00000490953 TMEM128Q5BJH2 165 aa13.42□□□□□ -0.26
SBDS-204ENST00000490953 TMEM217Q8N7C4 229 aa13.42□□□□□ -0.26
SBDS-204ENST00000490953 GATAD1Q8WUU5 269 aa13.42□□□□□ -0.26
SBDS-204ENST00000490953 RBM38Q9H0Z9 239 aaKnown RBP13.42□□□□□ -0.26
SBDS-204ENST00000490953 CA1P00915 261 aaPredicted RBP13.41□□□□□ -0.26
SBDS-204ENST00000490953 IFNA4P05014 189 aa13.41□□□□□ -0.26
SBDS-204ENST00000490953 IL4P05112 153 aa13.41□□□□□ -0.26
SBDS-204ENST00000490953 EIF2B2P49770 351 aaKnown RBP13.41□□□□□ -0.26
SBDS-204ENST00000490953 CCDC190Q86UF4 302 aa13.41□□□□□ -0.26
SBDS-204ENST00000490953 STHQ8IWL8 128 aa13.41□□□□□ -0.26
SBDS-204ENST00000490953 SLC25A21Q9BQT8 299 aaPredicted RBP13.41□□□□□ -0.26
SBDS-204ENST00000490953 U3KQE9 123 aa13.41□□□□□ -0.26
SBDS-204ENST00000490953 NUPR2A6NF83 97 aa13.4□□□□□ -0.26
SBDS-204ENST00000490953 TOMM40O96008 361 aa13.4□□□□□ -0.26
SBDS-204ENST00000490953 ZNF688P0C7X2 276 aa13.4□□□□□ -0.26
SBDS-204ENST00000490953 ATF4P18848 351 aaPredicted RBP13.4□□□□□ -0.26
SBDS-204ENST00000490953 USF2Q15853 346 aaPredicted RBP13.4□□□□□ -0.26
SBDS-204ENST00000490953 DEDD2Q8WXF8 326 aa13.4□□□□□ -0.26
SBDS-204ENST00000490953 RARRES2Q99969 163 aa13.4□□□□□ -0.26
SBDS-204ENST00000490953 SACSQ9NZJ4 4579 aa13.39□□□□□ -0.27
SBDS-204ENST00000490953 HELTA6NFD8 242 aa13.39□□□□□ -0.27
SBDS-204ENST00000490953 RD3LP0DJH9 198 aa13.39□□□□□ -0.27
SBDS-204ENST00000490953 SPANXN2Q5MJ10 180 aa13.39□□□□□ -0.27
SBDS-204ENST00000490953 C16orf54Q6UWD8 224 aa13.39□□□□□ -0.27
SBDS-204ENST00000490953 DCANP1Q8TF63 244 aa13.39□□□□□ -0.27
SBDS-204ENST00000490953 GLMPQ8WWB7 406 aa13.39□□□□□ -0.27
SBDS-204ENST00000490953 IAPPP10997 89 aa13.38□□□□□ -0.27
SBDS-204ENST00000490953 ATP5IP56385 69 aaPredicted RBP13.38□□□□□ -0.27
SBDS-204ENST00000490953 DHRS2Q13268 280 aa13.38□□□□□ -0.27
SBDS-204ENST00000490953 PPP1R1AQ13522 171 aa13.38□□□□□ -0.27
SBDS-204ENST00000490953 CENPSQ8N2Z9 138 aa13.38□□□□□ -0.27
SBDS-204ENST00000490953 LRTM2Q8N967 370 aa13.38□□□□□ -0.27
SBDS-204ENST00000490953 OR11H2Q8NH07 326 aa13.38□□□□□ -0.27
SBDS-204ENST00000490953 SLC35E1Q96K37 410 aa13.38□□□□□ -0.27
SBDS-204ENST00000490953 ZNF701M0R085 212 aaPredicted RBP13.37□□□□□ -0.27
SBDS-204ENST00000490953 PITX3O75364 302 aa13.37□□□□□ -0.27
SBDS-204ENST00000490953 SFT2D2O95562 160 aa13.37□□□□□ -0.27
SBDS-204ENST00000490953 PSG1P11464 419 aa13.37□□□□□ -0.27
SBDS-204ENST00000490953 INPP1P49441 399 aa13.37□□□□□ -0.27
SBDS-204ENST00000490953 AP2S1P53680 142 aaPredicted RBP13.37□□□□□ -0.27
SBDS-204ENST00000490953 OR51G1Q8NGK1 321 aa13.37□□□□□ -0.27
SBDS-204ENST00000490953 SRRQ9GZT4 340 aa13.37□□□□□ -0.27
SBDS-204ENST00000490953 ZFP92A6NM28 416 aa13.36□□□□□ -0.27
SBDS-204ENST00000490953 KNCNA6PVL3 124 aa13.36□□□□□ -0.27
SBDS-204ENST00000490953 SLC25A6P12236 298 aa13.36□□□□□ -0.27
SBDS-204ENST00000490953 GPX4P36969 197 aaPredicted RBP13.36□□□□□ -0.27
SBDS-204ENST00000490953 RAB11AP62491 216 aa13.36□□□□□ -0.27
SBDS-204ENST00000490953 CEMP1Q6PRD7 247 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms