RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 RND2P52198 227 aa11.3□□□□□ -0.6
COL27A1-206ENST00000490831 YPEL3P61236 119 aaPredicted RBP11.3□□□□□ -0.6
COL27A1-206ENST00000490831 OR1S1Q8NH92 325 aa11.3□□□□□ -0.6
COL27A1-206ENST00000490831 ST8SIA2Q92186 375 aa11.3□□□□□ -0.6
COL27A1-206ENST00000490831 RETNQ9HD89 108 aa11.3□□□□□ -0.6
COL27A1-206ENST00000490831 IGHV3OR16-13A0A075B7E8 117 aa11.29□□□□□ -0.6
COL27A1-206ENST00000490831 IGHV3-74A0A0B4J1X5 117 aa11.29□□□□□ -0.6
COL27A1-206ENST00000490831 TRAV2A0A0B4J234 112 aa11.29□□□□□ -0.6
COL27A1-206ENST00000490831 IFNA10P01566 189 aa11.29□□□□□ -0.6
COL27A1-206ENST00000490831 IL7P13232 177 aa11.29□□□□□ -0.6
COL27A1-206ENST00000490831 NPPCP23582 126 aa11.29□□□□□ -0.6
COL27A1-206ENST00000490831 OR10J1P30954 320 aa11.29□□□□□ -0.6
COL27A1-206ENST00000490831 TIGITQ495A1 244 aa11.29□□□□□ -0.6
COL27A1-206ENST00000490831 TCF24Q7RTU0 167 aa11.29□□□□□ -0.6
COL27A1-206ENST00000490831 LILRB2Q8N423 598 aa11.29□□□□□ -0.6
COL27A1-206ENST00000490831 UBQLN2Q9UHD9 624 aa11.29□□□□□ -0.6
COL27A1-206ENST00000490831 A0A1W2PS18 150 aa11.28□□□□□ -0.6
COL27A1-206ENST00000490831 C9orf170A2RU37 121 aa11.28□□□□□ -0.6
COL27A1-206ENST00000490831 CMC4P56277 68 aaPredicted RBP11.28□□□□□ -0.6
COL27A1-206ENST00000490831 CASC10Q5T4H9 136 aa11.28□□□□□ -0.6
COL27A1-206ENST00000490831 NPIPB3Q92617 1050 aa11.28□□□□□ -0.6
COL27A1-206ENST00000490831 METTL26Q96S19 204 aa11.28□□□□□ -0.6
COL27A1-206ENST00000490831 TMEM231Q9H6L2 316 aa11.28□□□□□ -0.6
COL27A1-206ENST00000490831 U3KQE9 123 aa11.28□□□□□ -0.6
COL27A1-206ENST00000490831 KIR2DL5BA0A0G2JN68 375 aa11.27□□□□□ -0.61
COL27A1-206ENST00000490831 KIR2DL5BA0A0G2JPC4 375 aa11.27□□□□□ -0.61
COL27A1-206ENST00000490831 CENPXA8MT69 81 aa11.27□□□□□ -0.61
COL27A1-206ENST00000490831 DFFBO76075 338 aa11.27□□□□□ -0.61
COL27A1-206ENST00000490831 GPX4P36969 197 aaPredicted RBP11.27□□□□□ -0.61
COL27A1-206ENST00000490831 CNPY1Q3B7I2 92 aa11.27□□□□□ -0.61
COL27A1-206ENST00000490831 GGNBP1Q5YKI7 109 aa11.27□□□□□ -0.61
COL27A1-206ENST00000490831 LINC00299Q6ZSB3 139 aa11.27□□□□□ -0.61
COL27A1-206ENST00000490831 KIR2DL5AQ8N109 375 aa11.27□□□□□ -0.61
COL27A1-206ENST00000490831 KIR2DL5BQ8NHK3 375 aa11.27□□□□□ -0.61
COL27A1-206ENST00000490831 FLVCR2Q9UPI3 526 aa11.27□□□□□ -0.61
COL27A1-206ENST00000490831 RYR3Q15413 4870 aa11.26□□□□□ -0.61
COL27A1-206ENST00000490831 UBE2CO00762 179 aa11.26□□□□□ -0.61
COL27A1-206ENST00000490831 MED6O75586 246 aa11.26□□□□□ -0.61
COL27A1-206ENST00000490831 LYL1P12980 280 aa11.26□□□□□ -0.61
COL27A1-206ENST00000490831 PAFAH1B2P68402 229 aa11.26□□□□□ -0.61
COL27A1-206ENST00000490831 DHRS2Q13268 280 aa11.26□□□□□ -0.61
COL27A1-206ENST00000490831 Q8WTZ3 238 aa11.26□□□□□ -0.61
COL27A1-206ENST00000490831 CIB3Q96Q77 187 aaPredicted RBP11.26□□□□□ -0.61
COL27A1-206ENST00000490831 OVOL2Q9BRP0 275 aa11.26□□□□□ -0.61
COL27A1-206ENST00000490831 MS4A6AQ9H2W1 248 aa11.26□□□□□ -0.61
COL27A1-206ENST00000490831 STARD9Q9P2P6 4700 aa11.26□□□□□ -0.61
COL27A1-206ENST00000490831 LINC00854A0A1B0GVQ3 168 aa11.25□□□□□ -0.61
COL27A1-206ENST00000490831 PLA2G10O15496 165 aa11.25□□□□□ -0.61
COL27A1-206ENST00000490831 TOMM40O96008 361 aa11.25□□□□□ -0.61
COL27A1-206ENST00000490831 IFNA4P05014 189 aa11.25□□□□□ -0.61
COL27A1-206ENST00000490831 HOXB5P09067 269 aa11.25□□□□□ -0.61
COL27A1-206ENST00000490831 OR4E1P0C645 316 aa11.25□□□□□ -0.61
COL27A1-206ENST00000490831 APOC4P55056 127 aa11.25□□□□□ -0.61
COL27A1-206ENST00000490831 GAMTQ14353 236 aa11.25□□□□□ -0.61
COL27A1-206ENST00000490831 Q6ZWC4 215 aa11.25□□□□□ -0.61
COL27A1-206ENST00000490831 LYG2Q86SG7 212 aa11.25□□□□□ -0.61
COL27A1-206ENST00000490831 ACY3Q96HD9 319 aa11.25□□□□□ -0.61
COL27A1-206ENST00000490831 MAP6D1Q9H9H5 199 aa11.25□□□□□ -0.61
COL27A1-206ENST00000490831 TP53TG1Q9Y2A0 90 aa11.25□□□□□ -0.61
COL27A1-206ENST00000490831 IGKV3-7A0A075B6H7 116 aa11.24□□□□□ -0.61
COL27A1-206ENST00000490831 IGHV3-66A0A0C4DH42 116 aa11.24□□□□□ -0.61
COL27A1-206ENST00000490831 SYNGR2O43760 224 aa11.24□□□□□ -0.61
COL27A1-206ENST00000490831 HNRNPCP07910 306 aaKnown RBP eCLIP11.24□□□□□ -0.61
COL27A1-206ENST00000490831 RD3LP0DJH9 198 aa11.24□□□□□ -0.61
COL27A1-206ENST00000490831 IAPPP10997 89 aa11.24□□□□□ -0.61
COL27A1-206ENST00000490831 P2RY1P47900 373 aa11.24□□□□□ -0.61
COL27A1-206ENST00000490831 TFPI2P48307 235 aa11.24□□□□□ -0.61
COL27A1-206ENST00000490831 RAB11AP62491 216 aa11.24□□□□□ -0.61
COL27A1-206ENST00000490831 ID3Q02535 119 aa11.24□□□□□ -0.61
COL27A1-206ENST00000490831 USF2Q15853 346 aaPredicted RBP11.24□□□□□ -0.61
COL27A1-206ENST00000490831 WFDC3Q8IUB2 231 aa11.24□□□□□ -0.61
COL27A1-206ENST00000490831 GBGT1Q8N5D6 347 aa11.24□□□□□ -0.61
COL27A1-206ENST00000490831 COQ8AQ8NI60 647 aa11.24□□□□□ -0.61
COL27A1-206ENST00000490831 NARS2Q96I59 477 aaKnown RBP11.24□□□□□ -0.61
COL27A1-206ENST00000490831 CSMD3Q7Z407 3707 aa11.24□□□□□ -0.61
COL27A1-206ENST00000490831 IGKV1D-37A0A075B6S9 117 aa11.23□□□□□ -0.61
COL27A1-206ENST00000490831 PRSS46E5RG02 174 aa11.23□□□□□ -0.61
COL27A1-206ENST00000490831 LYRM1O43325 122 aa11.23□□□□□ -0.61
COL27A1-206ENST00000490831 ADAP1O75689 374 aa11.23□□□□□ -0.61
COL27A1-206ENST00000490831 IL4P05112 153 aa11.23□□□□□ -0.61
COL27A1-206ENST00000490831 ANXA7P20073 488 aaKnown RBP11.23□□□□□ -0.61
COL27A1-206ENST00000490831 C16orf54Q6UWD8 224 aa11.23□□□□□ -0.61
COL27A1-206ENST00000490831 APRG1Q8IVJ8 170 aa11.23□□□□□ -0.61
COL27A1-206ENST00000490831 GLMPQ8WWB7 406 aa11.23□□□□□ -0.61
COL27A1-206ENST00000490831 GRAMD2BQ96HH9 432 aa11.23□□□□□ -0.61
COL27A1-206ENST00000490831 CCDC32Q9BV29 185 aa11.23□□□□□ -0.61
COL27A1-206ENST00000490831 DYNC2H1Q8NCM8 4307 aaKnown RBP11.22□□□□□ -0.61
COL27A1-206ENST00000490831 MPTX1A8MV57 137 aa11.22□□□□□ -0.61
COL27A1-206ENST00000490831 K7EQG2 157 aa11.22□□□□□ -0.61
COL27A1-206ENST00000490831 DNASE2O00115 360 aaPredicted RBP11.22□□□□□ -0.61
COL27A1-206ENST00000490831 PSG1P11464 419 aa11.22□□□□□ -0.61
COL27A1-206ENST00000490831 RPP30P78346 268 aaKnown RBP11.22□□□□□ -0.61
COL27A1-206ENST00000490831 OR51G1Q8NGK1 321 aa11.22□□□□□ -0.61
COL27A1-206ENST00000490831 OR4D5Q8NGN0 318 aa11.22□□□□□ -0.61
COL27A1-206ENST00000490831 DCANP1Q8TF63 244 aa11.22□□□□□ -0.61
COL27A1-206ENST00000490831 MITD1Q8WV92 249 aa11.22□□□□□ -0.61
COL27A1-206ENST00000490831 SLC35E1Q96K37 410 aa11.22□□□□□ -0.61
COL27A1-206ENST00000490831 MAGT1Q9H0U3 335 aa11.22□□□□□ -0.61
COL27A1-206ENST00000490831 HELTA6NFD8 242 aa11.21□□□□□ -0.61
COL27A1-206ENST00000490831 A6NHS1 94 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms