RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 OR2T8A6NH00 312 aa10.58□□□□□ -0.72
SHOX2-205ENST00000490689 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.58□□□□□ -0.72
SHOX2-205ENST00000490689 K7EN84 100 aa10.58□□□□□ -0.72
SHOX2-205ENST00000490689 Q5PR19 223 aa10.58□□□□□ -0.72
SHOX2-205ENST00000490689 WDR86Q86TI4 376 aa10.58□□□□□ -0.72
SHOX2-205ENST00000490689 ARL6IP6Q8N6S5 226 aa10.58□□□□□ -0.72
SHOX2-205ENST00000490689 GPR82Q96P67 336 aa10.58□□□□□ -0.72
SHOX2-205ENST00000490689 ASCL2Q99929 193 aa10.58□□□□□ -0.72
SHOX2-205ENST00000490689 C11orf1Q9H5F2 150 aa10.58□□□□□ -0.72
SHOX2-205ENST00000490689 TDGF1P13385 188 aa10.58□□□□□ -0.72
SHOX2-205ENST00000490689 Q6ZT83 130 aa10.58□□□□□ -0.72
SHOX2-205ENST00000490689 C18orf32Q8TCD1 76 aa10.58□□□□□ -0.72
SHOX2-205ENST00000490689 MBNL3Q9NUK0 354 aaKnown RBP10.58□□□□□ -0.72
SHOX2-205ENST00000490689 IGLL1P15814 213 aa10.57□□□□□ -0.72
SHOX2-205ENST00000490689 CD177Q8N6Q3 437 aa10.57□□□□□ -0.72
SHOX2-205ENST00000490689 RNASE8Q8TDE3 154 aaKnown RBP10.57□□□□□ -0.72
SHOX2-205ENST00000490689 ZNF714Q96N38 554 aa10.57□□□□□ -0.72
SHOX2-205ENST00000490689 MRPL20Q9BYC9 149 aaKnown RBP10.57□□□□□ -0.72
SHOX2-205ENST00000490689 ZNRD1Q9P1U0 126 aa10.57□□□□□ -0.72
SHOX2-205ENST00000490689 ONECUT1Q9UBC0 465 aa10.57□□□□□ -0.72
SHOX2-205ENST00000490689 ZGRF1Q86YA3 2104 aa10.57□□□□□ -0.72
SHOX2-205ENST00000490689 A1L4Q6 167 aa10.57□□□□□ -0.72
SHOX2-205ENST00000490689 C21orf140B9A014 251 aa10.57□□□□□ -0.72
SHOX2-205ENST00000490689 CCL3L1P16619 93 aa10.57□□□□□ -0.72
SHOX2-205ENST00000490689 TMEM105Q8N8V8 129 aa10.57□□□□□ -0.72
SHOX2-205ENST00000490689 TRAV8-1A0A0A6YYK1 113 aa10.57□□□□□ -0.72
SHOX2-205ENST00000490689 CCL25O15444 150 aa10.57□□□□□ -0.72
SHOX2-205ENST00000490689 MLNRO43193 412 aa10.57□□□□□ -0.72
SHOX2-205ENST00000490689 FCGR2BP31994 310 aaPredicted RBP10.57□□□□□ -0.72
SHOX2-205ENST00000490689 CEACAM8P31997 349 aaPredicted RBP10.57□□□□□ -0.72
SHOX2-205ENST00000490689 PDLIM4P50479 330 aa10.57□□□□□ -0.72
SHOX2-205ENST00000490689 V9GYV3 84 aa10.57□□□□□ -0.72
SHOX2-205ENST00000490689 KBTBD11-OT1A0A1B0GTJ5 212 aa10.56□□□□□ -0.72
SHOX2-205ENST00000490689 MBNL2Q5VZF2 373 aaKnown RBP10.56□□□□□ -0.72
SHOX2-205ENST00000490689 CHD7Q9P2D1 2997 aa10.56□□□□□ -0.72
SHOX2-205ENST00000490689 MALRD1Q5VYJ5 2156 aa10.56□□□□□ -0.72
SHOX2-205ENST00000490689 TMEM189A5PLL7 270 aa10.56□□□□□ -0.72
SHOX2-205ENST00000490689 NPIPB11E5RHQ5 1161 aa10.56□□□□□ -0.72
SHOX2-205ENST00000490689 YPEL1O60688 119 aa10.56□□□□□ -0.72
SHOX2-205ENST00000490689 GAGE1Q13065 139 aa10.56□□□□□ -0.72
SHOX2-205ENST00000490689 C1orf210Q8IVY1 113 aa10.56□□□□□ -0.72
SHOX2-205ENST00000490689 YPEL2Q96QA6 119 aa10.56□□□□□ -0.72
SHOX2-205ENST00000490689 EML6Q6ZMW3 1958 aa10.56□□□□□ -0.72
SHOX2-205ENST00000490689 A0A1B0GUT8 65 aa10.56□□□□□ -0.72
SHOX2-205ENST00000490689 UPK2O00526 184 aa10.56□□□□□ -0.72
SHOX2-205ENST00000490689 CRYABP02511 175 aaKnown RBP10.56□□□□□ -0.72
SHOX2-205ENST00000490689 CD69Q07108 199 aa10.56□□□□□ -0.72
SHOX2-205ENST00000490689 IGHV3OR16-8A0A075B7F1 116 aa10.55□□□□□ -0.72
SHOX2-205ENST00000490689 IGHV1-69-2A0A0G2JMI3 117 aa10.55□□□□□ -0.72
SHOX2-205ENST00000490689 CGB1A6NKQ9 187 aa10.55□□□□□ -0.72
SHOX2-205ENST00000490689 TMEM108Q6UXF1 575 aa10.55□□□□□ -0.72
SHOX2-205ENST00000490689 RBPMS2Q6ZRY4 209 aaKnown RBP10.55□□□□□ -0.72
SHOX2-205ENST00000490689 SMIM12Q96EX1 92 aa10.55□□□□□ -0.72
SHOX2-205ENST00000490689 COL25A1Q9BXS0 654 aaPredicted RBP10.55□□□□□ -0.72
SHOX2-205ENST00000490689 EPDR1Q9UM22 224 aa10.55□□□□□ -0.72
SHOX2-205ENST00000490689 SPCS1Q9Y6A9 102 aa10.55□□□□□ -0.72
SHOX2-205ENST00000490689 SCGB1C2P0DMR2 95 aa10.55□□□□□ -0.72
SHOX2-205ENST00000490689 S100A4P26447 101 aaKnown RBP10.55□□□□□ -0.72
SHOX2-205ENST00000490689 PNKDQ8N490 385 aa10.55□□□□□ -0.72
SHOX2-205ENST00000490689 OR4C13Q8NGP0 309 aa10.55□□□□□ -0.72
SHOX2-205ENST00000490689 SLC25A33Q9BSK2 321 aa10.55□□□□□ -0.72
SHOX2-205ENST00000490689 NGBQ9NPG2 151 aa10.55□□□□□ -0.72
SHOX2-205ENST00000490689 UBALD2Q8IYN6 164 aa10.55□□□□□ -0.72
SHOX2-205ENST00000490689 ZNF414Q96IQ9 312 aa10.55□□□□□ -0.72
SHOX2-205ENST00000490689 IGHV2OR16-5A0A0B4J2B6 119 aa10.55□□□□□ -0.72
SHOX2-205ENST00000490689 GGTLC3B5MD39 225 aa10.55□□□□□ -0.72
SHOX2-205ENST00000490689 PRRG2O14669 202 aa10.55□□□□□ -0.72
SHOX2-205ENST00000490689 ZNF295-AS1Q8N0V1 137 aa10.55□□□□□ -0.72
SHOX2-205ENST00000490689 FAM168AQ92567 244 aa10.55□□□□□ -0.72
SHOX2-205ENST00000490689 TMUB1Q9BVT8 246 aa10.55□□□□□ -0.72
SHOX2-205ENST00000490689 TMEM265A0A087WTH1 108 aa10.54□□□□□ -0.72
SHOX2-205ENST00000490689 GAGE12BA1L429 117 aa10.54□□□□□ -0.72
SHOX2-205ENST00000490689 IGKV1-16P04430 117 aa10.54□□□□□ -0.72
SHOX2-205ENST00000490689 CD40P25942 277 aa10.54□□□□□ -0.72
SHOX2-205ENST00000490689 SCGB1D4Q6XE38 83 aa10.54□□□□□ -0.72
SHOX2-205ENST00000490689 KLK15Q9H2R5 256 aa10.54□□□□□ -0.72
SHOX2-205ENST00000490689 Q9H3A6 140 aa10.54□□□□□ -0.72
SHOX2-205ENST00000490689 TRAV8-6A0A0B4J262 113 aa10.54□□□□□ -0.72
SHOX2-205ENST00000490689 SCNM1Q9BWG6 230 aa10.54□□□□□ -0.72
SHOX2-205ENST00000490689 ST20Q9HBF5 79 aa10.54□□□□□ -0.72
SHOX2-205ENST00000490689 SYS1-DBNDD2H3BUS1 97 aa10.53□□□□□ -0.72
SHOX2-205ENST00000490689 PRCDQ00LT1 54 aa10.53□□□□□ -0.72
SHOX2-205ENST00000490689 CIARTQ8N365 385 aaPredicted RBP10.53□□□□□ -0.72
SHOX2-205ENST00000490689 PPIAL4EA0A075B759 164 aa10.53□□□□□ -0.72
SHOX2-205ENST00000490689 J3QW42 95 aa10.53□□□□□ -0.72
SHOX2-205ENST00000490689 PPIAL4FP0DN26 164 aa10.53□□□□□ -0.72
SHOX2-205ENST00000490689 CACNG7P62955 275 aa10.53□□□□□ -0.72
SHOX2-205ENST00000490689 SPRR3Q9UBC9 169 aa10.53□□□□□ -0.72
SHOX2-205ENST00000490689 KIR2DL2P43627 348 aaPredicted RBP10.53□□□□□ -0.72
SHOX2-205ENST00000490689 CST9LQ9H4G1 147 aa10.53□□□□□ -0.72
SHOX2-205ENST00000490689 IGKV3-7A0A075B6H7 116 aa10.52□□□□□ -0.72
SHOX2-205ENST00000490689 SFTA2Q6UW10 78 aa10.52□□□□□ -0.72
SHOX2-205ENST00000490689 MRPL52Q86TS9 123 aaKnown RBP10.52□□□□□ -0.72
SHOX2-205ENST00000490689 PRELID3AQ96N28 172 aa10.52□□□□□ -0.72
SHOX2-205ENST00000490689 CDX2Q99626 313 aaPredicted RBP10.52□□□□□ -0.72
SHOX2-205ENST00000490689 MRPS16Q9Y3D3 137 aaKnown RBP10.52□□□□□ -0.72
SHOX2-205ENST00000490689 TRAV30A0A087WSZ9 112 aa10.52□□□□□ -0.73
SHOX2-205ENST00000490689 SPACA3Q8IXA5 215 aa10.52□□□□□ -0.73
SHOX2-205ENST00000490689 PCNX2A6NKB5 2137 aa10.52□□□□□ -0.73
SHOX2-205ENST00000490689 CIDEAO60543 219 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms