RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 CLUHP3Q96NS8 147 aa13.99□□□□□ -0.17
UPK3B-205ENST00000490360 FNDC4Q9H6D8 234 aaPredicted RBP13.99□□□□□ -0.17
UPK3B-205ENST00000490360 PRSS3P35030 304 aa13.98□□□□□ -0.17
UPK3B-205ENST00000490360 YPEL3P61236 119 aaPredicted RBP13.98□□□□□ -0.17
UPK3B-205ENST00000490360 TNP2Q05952 138 aa13.98□□□□□ -0.17
UPK3B-205ENST00000490360 TIGITQ495A1 244 aa13.98□□□□□ -0.17
UPK3B-205ENST00000490360 TMEM69Q5SWH9 247 aa13.98□□□□□ -0.17
UPK3B-205ENST00000490360 SPARTQ8N0X7 666 aa13.98□□□□□ -0.17
UPK3B-205ENST00000490360 MRPL36Q9P0J6 103 aaKnown RBP13.98□□□□□ -0.17
UPK3B-205ENST00000490360 A0A0B4J293 547 aa13.97□□□□□ -0.17
UPK3B-205ENST00000490360 HTN3P15516 51 aa13.97□□□□□ -0.17
UPK3B-205ENST00000490360 UBE2NLQ5JXB2 153 aa13.97□□□□□ -0.17
UPK3B-205ENST00000490360 LYSMD2Q8IV50 215 aa13.97□□□□□ -0.17
UPK3B-205ENST00000490360 ATG101Q9BSB4 218 aa13.97□□□□□ -0.17
UPK3B-205ENST00000490360 IGHV3OR16-12A0A075B7B8 117 aa13.96□□□□□ -0.17
UPK3B-205ENST00000490360 SLC25A4P12235 298 aa13.96□□□□□ -0.17
UPK3B-205ENST00000490360 HLA-DMAP28067 261 aa13.96□□□□□ -0.17
UPK3B-205ENST00000490360 AKR1C2P52895 323 aa13.96□□□□□ -0.17
UPK3B-205ENST00000490360 TMEM88Q6PEY1 159 aa13.96□□□□□ -0.17
UPK3B-205ENST00000490360 SIGLEC15Q6ZMC9 328 aa13.96□□□□□ -0.17
UPK3B-205ENST00000490360 C6orf223Q8N319 242 aa13.96□□□□□ -0.17
UPK3B-205ENST00000490360 GOLT1BQ9Y3E0 138 aa13.96□□□□□ -0.17
UPK3B-205ENST00000490360 HBE1P02100 147 aa13.95□□□□□ -0.18
UPK3B-205ENST00000490360 P0C879 139 aa13.95□□□□□ -0.18
UPK3B-205ENST00000490360 IGLC1P0CG04 106 aa13.95□□□□□ -0.18
UPK3B-205ENST00000490360 NUP62P37198 522 aaPredicted RBP13.95□□□□□ -0.18
UPK3B-205ENST00000490360 ETV6P41212 452 aa13.95□□□□□ -0.18
UPK3B-205ENST00000490360 ALDH3B2P48448 385 aa13.95□□□□□ -0.18
UPK3B-205ENST00000490360 MLANAQ16655 118 aa13.95□□□□□ -0.18
UPK3B-205ENST00000490360 IZUMO4Q1ZYL8 232 aa13.95□□□□□ -0.18
UPK3B-205ENST00000490360 BSXQ3C1V8 233 aa13.95□□□□□ -0.18
UPK3B-205ENST00000490360 SPATA31B1PQ5VZV4 182 aa13.95□□□□□ -0.18
UPK3B-205ENST00000490360 PFDN2Q9UHV9 154 aa13.95□□□□□ -0.18
UPK3B-205ENST00000490360 LOC100506127A0A0U1RQW1 187 aa13.94□□□□□ -0.18
UPK3B-205ENST00000490360 NBDYA0A0U1RRE5 68 aa13.94□□□□□ -0.18
UPK3B-205ENST00000490360 BUB3O43684 328 aa13.94□□□□□ -0.18
UPK3B-205ENST00000490360 IGKV1-5P01602 117 aa13.94□□□□□ -0.18
UPK3B-205ENST00000490360 OR10J1P30954 320 aa13.94□□□□□ -0.18
UPK3B-205ENST00000490360 HTR2BP41595 481 aa13.94□□□□□ -0.18
UPK3B-205ENST00000490360 RND3P61587 244 aa13.94□□□□□ -0.18
UPK3B-205ENST00000490360 DHODHQ02127 395 aa13.94□□□□□ -0.18
UPK3B-205ENST00000490360 GSG1LQ6UXU4 331 aa13.94□□□□□ -0.18
UPK3B-205ENST00000490360 ZNF486Q96H40 463 aaPredicted RBP13.94□□□□□ -0.18
UPK3B-205ENST00000490360 YTHDF1Q9BYJ9 559 aaKnown RBP13.94□□□□□ -0.18
UPK3B-205ENST00000490360 SCRT2Q9NQ03 307 aa13.94□□□□□ -0.18
UPK3B-205ENST00000490360 IL4P05112 153 aa13.93□□□□□ -0.18
UPK3B-205ENST00000490360 ID1P41134 155 aa13.93□□□□□ -0.18
UPK3B-205ENST00000490360 DAD1P61803 113 aa13.93□□□□□ -0.18
UPK3B-205ENST00000490360 IZUMO2Q6UXV1 221 aa13.93□□□□□ -0.18
UPK3B-205ENST00000490360 FOXI2Q6ZQN5 318 aa13.93□□□□□ -0.18
UPK3B-205ENST00000490360 RNASEH2CQ8TDP1 164 aaKnown RBP13.93□□□□□ -0.18
UPK3B-205ENST00000490360 SAV1Q9H4B6 383 aaPredicted RBP13.93□□□□□ -0.18
UPK3B-205ENST00000490360 YTHDF2Q9Y5A9 579 aaKnown RBP13.93□□□□□ -0.18
UPK3B-205ENST00000490360 LRP1BQ9NZR2 4599 aa13.92□□□□□ -0.18
UPK3B-205ENST00000490360 LOC102723971A0A1B0GUV8 181 aa13.92□□□□□ -0.18
UPK3B-205ENST00000490360 ETFRF1Q6IPR1 90 aa13.92□□□□□ -0.18
UPK3B-205ENST00000490360 PRSS54Q6PEW0 395 aa13.92□□□□□ -0.18
UPK3B-205ENST00000490360 RRNAD1Q96FB5 475 aaKnown RBP13.92□□□□□ -0.18
UPK3B-205ENST00000490360 SCPEP1Q9HB40 452 aa13.92□□□□□ -0.18
UPK3B-205ENST00000490360 RAB26Q9ULW5 256 aa13.92□□□□□ -0.18
UPK3B-205ENST00000490360 RND2P52198 227 aa13.91□□□□□ -0.18
UPK3B-205ENST00000490360 SPCS3P61009 180 aa13.91□□□□□ -0.18
UPK3B-205ENST00000490360 USF2Q15853 346 aaPredicted RBP13.91□□□□□ -0.18
UPK3B-205ENST00000490360 RRN3P1Q2M238 152 aa13.91□□□□□ -0.18
UPK3B-205ENST00000490360 SAMD12Q8N8I0 201 aa13.91□□□□□ -0.18
UPK3B-205ENST00000490360 ZNF709Q8N972 641 aa13.91□□□□□ -0.18
UPK3B-205ENST00000490360 GPX8Q8TED1 209 aa13.91□□□□□ -0.18
UPK3B-205ENST00000490360 C7orf50Q9BRJ6 194 aaKnown RBP13.91□□□□□ -0.18
UPK3B-205ENST00000490360 IGKV3-20P01619 116 aa13.9□□□□□ -0.18
UPK3B-205ENST00000490360 RD3LP0DJH9 198 aa13.9□□□□□ -0.18
UPK3B-205ENST00000490360 PGAM2P15259 253 aa13.9□□□□□ -0.18
UPK3B-205ENST00000490360 RCVRNP35243 200 aa13.9□□□□□ -0.18
UPK3B-205ENST00000490360 PSMB3P49720 205 aa13.9□□□□□ -0.18
UPK3B-205ENST00000490360 C2orf83Q53S99 150 aa13.9□□□□□ -0.18
UPK3B-205ENST00000490360 OR52E5Q8NH55 327 aa13.9□□□□□ -0.18
UPK3B-205ENST00000490360 ZNRF2Q8NHG8 242 aa13.9□□□□□ -0.18
UPK3B-205ENST00000490360 B3GALNT1O75752 331 aa13.89□□□□□ -0.19
UPK3B-205ENST00000490360 TOMM40O96008 361 aa13.89□□□□□ -0.19
UPK3B-205ENST00000490360 PIGPP57054 158 aa13.89□□□□□ -0.19
UPK3B-205ENST00000490360 FXYD7P58549 80 aa13.89□□□□□ -0.19
UPK3B-205ENST00000490360 PSG9Q00887 426 aa13.89□□□□□ -0.19
UPK3B-205ENST00000490360 ZNF79Q15937 498 aa13.89□□□□□ -0.19
UPK3B-205ENST00000490360 AARDQ4LEZ3 155 aa13.89□□□□□ -0.19
UPK3B-205ENST00000490360 GDF5OSQ5U4N7 250 aa13.89□□□□□ -0.19
UPK3B-205ENST00000490360 NOXA1Q86UR1 476 aa13.89□□□□□ -0.19
UPK3B-205ENST00000490360 OR4B1Q8NGF8 309 aa13.89□□□□□ -0.19
UPK3B-205ENST00000490360 LINC00052Q96N35 136 aa13.89□□□□□ -0.19
UPK3B-205ENST00000490360 TP53RKQ96S44 253 aa13.89□□□□□ -0.19
UPK3B-205ENST00000490360 KLK11Q9UBX7 282 aa13.89□□□□□ -0.19
UPK3B-205ENST00000490360 C3orf85A0A1B0GTC6 90 aa13.88□□□□□ -0.19
UPK3B-205ENST00000490360 SMIM31A0A1B0GVY4 71 aa13.88□□□□□ -0.19
UPK3B-205ENST00000490360 CCL18P55774 89 aa13.88□□□□□ -0.19
UPK3B-205ENST00000490360 TRIM16LQ309B1 348 aa13.88□□□□□ -0.19
UPK3B-205ENST00000490360 SAMD13Q5VXD3 122 aa13.88□□□□□ -0.19
UPK3B-205ENST00000490360 FAM219AQ8IW50 185 aa13.88□□□□□ -0.19
UPK3B-205ENST00000490360 COQ8AQ8NI60 647 aa13.88□□□□□ -0.19
UPK3B-205ENST00000490360 RNASE11Q8TAA1 199 aaKnown RBP13.88□□□□□ -0.19
UPK3B-205ENST00000490360 HEYLQ9NQ87 328 aaPredicted RBP13.88□□□□□ -0.19
UPK3B-205ENST00000490360 HERC1Q15751 4861 aa13.87□□□□□ -0.19
UPK3B-205ENST00000490360 LYRM9A8MSI8 78 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms