RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 DHRS2Q13268 280 aa10.71□□□□□ -0.69
BRCA1-218ENST00000489037 TIGITQ495A1 244 aa10.71□□□□□ -0.69
BRCA1-218ENST00000489037 PRSS54Q6PEW0 395 aa10.71□□□□□ -0.69
BRCA1-218ENST00000489037 METTL26Q96S19 204 aa10.71□□□□□ -0.69
BRCA1-218ENST00000489037 SPATA25Q9BR10 227 aa10.71□□□□□ -0.69
BRCA1-218ENST00000489037 MRPL36Q9P0J6 103 aaKnown RBP10.71□□□□□ -0.69
BRCA1-218ENST00000489037 WRBO00258 174 aa10.7□□□□□ -0.7
BRCA1-218ENST00000489037 PLA2G10O15496 165 aa10.7□□□□□ -0.7
BRCA1-218ENST00000489037 SYNGR2O43760 224 aa10.7□□□□□ -0.7
BRCA1-218ENST00000489037 IAPPP10997 89 aa10.7□□□□□ -0.7
BRCA1-218ENST00000489037 OR10J1P30954 320 aa10.7□□□□□ -0.7
BRCA1-218ENST00000489037 BTCP35070 178 aa10.7□□□□□ -0.7
BRCA1-218ENST00000489037 GPX4P36969 197 aaPredicted RBP10.7□□□□□ -0.7
BRCA1-218ENST00000489037 HAGHQ16775 308 aa10.7□□□□□ -0.7
BRCA1-218ENST00000489037 MZT2BQ6NZ67 158 aa10.7□□□□□ -0.7
BRCA1-218ENST00000489037 NPIPB3Q92617 1050 aa10.7□□□□□ -0.7
BRCA1-218ENST00000489037 ACY3Q96HD9 319 aa10.7□□□□□ -0.7
BRCA1-218ENST00000489037 SLC35E1Q96K37 410 aa10.7□□□□□ -0.7
BRCA1-218ENST00000489037 RNF2Q99496 336 aa10.7□□□□□ -0.7
BRCA1-218ENST00000489037 TM2D3Q9BRN9 247 aa10.7□□□□□ -0.7
BRCA1-218ENST00000489037 C20orf85Q9H1P6 137 aa10.7□□□□□ -0.7
BRCA1-218ENST00000489037 IGHV3OR16-13A0A075B7E8 117 aa10.69□□□□□ -0.7
BRCA1-218ENST00000489037 IGHV3-74A0A0B4J1X5 117 aa10.69□□□□□ -0.7
BRCA1-218ENST00000489037 TCRBP04435 133 aa10.69□□□□□ -0.7
BRCA1-218ENST00000489037 IGLC1P0CG04 106 aa10.69□□□□□ -0.7
BRCA1-218ENST00000489037 YPEL3P61236 119 aaPredicted RBP10.69□□□□□ -0.7
BRCA1-218ENST00000489037 RPL11P62913 178 aaKnown RBP10.69□□□□□ -0.7
BRCA1-218ENST00000489037 TMEM170AQ8WVE7 144 aa10.69□□□□□ -0.7
BRCA1-218ENST00000489037 GRAMD2BQ96HH9 432 aa10.69□□□□□ -0.7
BRCA1-218ENST00000489037 WDR12Q9GZL7 423 aaKnown RBP10.69□□□□□ -0.7
BRCA1-218ENST00000489037 MAGT1Q9H0U3 335 aa10.69□□□□□ -0.7
BRCA1-218ENST00000489037 WFDC10AQ9H1F0 79 aa10.69□□□□□ -0.7
BRCA1-218ENST00000489037 ZFAND3Q9H8U3 227 aa10.69□□□□□ -0.7
BRCA1-218ENST00000489037 BATF3Q9NR55 127 aa10.69□□□□□ -0.7
BRCA1-218ENST00000489037 IGKV3-7A0A075B6H7 116 aa10.68□□□□□ -0.7
BRCA1-218ENST00000489037 DNASE2O00115 360 aaPredicted RBP10.68□□□□□ -0.7
BRCA1-218ENST00000489037 ADAP1O75689 374 aa10.68□□□□□ -0.7
BRCA1-218ENST00000489037 IGKV1-17P01599 117 aa10.68□□□□□ -0.7
BRCA1-218ENST00000489037 FABP1P07148 127 aa10.68□□□□□ -0.7
BRCA1-218ENST00000489037 ZNF846Q147U1 533 aa10.68□□□□□ -0.7
BRCA1-218ENST00000489037 TCF24Q7RTU0 167 aa10.68□□□□□ -0.7
BRCA1-218ENST00000489037 ZNF414Q96IQ9 312 aa10.68□□□□□ -0.7
BRCA1-218ENST00000489037 PTTG2Q9NZH5 202 aa10.68□□□□□ -0.7
BRCA1-218ENST00000489037 TRAV6A0A075B6T7 132 aa10.67□□□□□ -0.7
BRCA1-218ENST00000489037 LOC102724200A0A096LPH7 203 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-218ENST00000489037 FAM240BA0A1B0GVZ2 78 aa10.67□□□□□ -0.7
BRCA1-218ENST00000489037 RBMY1BA6NDE4 496 aaKnown RBP10.67□□□□□ -0.7
BRCA1-218ENST00000489037 RBMY1EA6NEQ0 496 aaKnown RBP10.67□□□□□ -0.7
BRCA1-218ENST00000489037 ZFP92A6NM28 416 aa10.67□□□□□ -0.7
BRCA1-218ENST00000489037 RBMY1DP0C7P1 496 aaKnown RBP10.67□□□□□ -0.7
BRCA1-218ENST00000489037 RD3LP0DJH9 198 aa10.67□□□□□ -0.7
BRCA1-218ENST00000489037 NKX2-1P43699 371 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-218ENST00000489037 TFPI2P48307 235 aa10.67□□□□□ -0.7
BRCA1-218ENST00000489037 EIF2B2P49770 351 aaKnown RBP10.67□□□□□ -0.7
BRCA1-218ENST00000489037 LINC00322Q6ZN03 302 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-218ENST00000489037 MITD1Q8WV92 249 aa10.67□□□□□ -0.7
BRCA1-218ENST00000489037 ST8SIA2Q92186 375 aa10.67□□□□□ -0.7
BRCA1-218ENST00000489037 VSIRQ9H7M9 311 aa10.67□□□□□ -0.7
BRCA1-218ENST00000489037 UBQLN2Q9UHD9 624 aa10.67□□□□□ -0.7
BRCA1-218ENST00000489037 PFDN2Q9UHV9 154 aa10.67□□□□□ -0.7
BRCA1-218ENST00000489037 STRAPQ9Y3F4 350 aaKnown RBP10.67□□□□□ -0.7
BRCA1-218ENST00000489037 IGHV3-66A0A0C4DH42 116 aa10.66□□□□□ -0.7
BRCA1-218ENST00000489037 TOMM40O96008 361 aa10.66□□□□□ -0.7
BRCA1-218ENST00000489037 APOHP02749 345 aaPredicted RBP10.66□□□□□ -0.7
BRCA1-218ENST00000489037 HNRNPCP07910 306 aaKnown RBP eCLIP10.66□□□□□ -0.7
BRCA1-218ENST00000489037 H2AFB2P0C5Z0 115 aa10.66□□□□□ -0.7
BRCA1-218ENST00000489037 CRYBB3P26998 211 aa10.66□□□□□ -0.7
BRCA1-218ENST00000489037 SPANXN5Q5MJ07 72 aa10.66□□□□□ -0.7
BRCA1-218ENST00000489037 GBGT1Q8N5D6 347 aa10.66□□□□□ -0.7
BRCA1-218ENST00000489037 FAM110AQ9BQ89 295 aa10.66□□□□□ -0.7
BRCA1-218ENST00000489037 GGTLC1Q9BX51 225 aa10.66□□□□□ -0.7
BRCA1-218ENST00000489037 NUDT15Q9NV35 164 aa10.66□□□□□ -0.7
BRCA1-218ENST00000489037 DFFBO76075 338 aa10.65□□□□□ -0.7
BRCA1-218ENST00000489037 SCGB1D2O95969 90 aa10.65□□□□□ -0.7
BRCA1-218ENST00000489037 IL4P05112 153 aa10.65□□□□□ -0.7
BRCA1-218ENST00000489037 ID3Q02535 119 aa10.65□□□□□ -0.7
BRCA1-218ENST00000489037 GAMTQ14353 236 aa10.65□□□□□ -0.7
BRCA1-218ENST00000489037 IAH1Q2TAA2 248 aaPredicted RBP10.65□□□□□ -0.7
BRCA1-218ENST00000489037 FAM90A2PQ658T7 463 aa10.65□□□□□ -0.7
BRCA1-218ENST00000489037 WFDC3Q8IUB2 231 aa10.65□□□□□ -0.7
BRCA1-218ENST00000489037 OR51G1Q8NGK1 321 aa10.65□□□□□ -0.7
BRCA1-218ENST00000489037 PSENENQ9NZ42 101 aa10.65□□□□□ -0.7
BRCA1-218ENST00000489037 GSKIPQ9P0R6 139 aa10.65□□□□□ -0.7
BRCA1-218ENST00000489037 RABAC1Q9UI14 185 aa10.65□□□□□ -0.7
BRCA1-218ENST00000489037 HELTA6NFD8 242 aa10.64□□□□□ -0.71
BRCA1-218ENST00000489037 MPTX1A8MV57 137 aa10.64□□□□□ -0.71
BRCA1-218ENST00000489037 NUP62P37198 522 aaPredicted RBP10.64□□□□□ -0.71
BRCA1-218ENST00000489037 P2RY1P47900 373 aa10.64□□□□□ -0.71
BRCA1-218ENST00000489037 AP2S1P53680 142 aaPredicted RBP10.64□□□□□ -0.71
BRCA1-218ENST00000489037 APOC4P55056 127 aa10.64□□□□□ -0.71
BRCA1-218ENST00000489037 POLR2GP62487 172 aaKnown RBP eCLIP10.64□□□□□ -0.71
BRCA1-218ENST00000489037 OR4D5Q8NGN0 318 aa10.64□□□□□ -0.71
BRCA1-218ENST00000489037 ENKURQ8TC29 256 aa10.64□□□□□ -0.71
BRCA1-218ENST00000489037 ZNF431Q8TF32 576 aaPredicted RBP10.64□□□□□ -0.71
BRCA1-218ENST00000489037 HUWE1Q7Z6Z7 4374 aaKnown RBP10.63□□□□□ -0.71
BRCA1-218ENST00000489037 STAB2Q8WWQ8 2551 aa10.63□□□□□ -0.71
BRCA1-218ENST00000489037 TRAV2A0A0B4J234 112 aa10.63□□□□□ -0.71
BRCA1-218ENST00000489037 H3BP45 60 aa10.63□□□□□ -0.71
BRCA1-218ENST00000489037 SSSCA1O60232 199 aa10.63□□□□□ -0.71
BRCA1-218ENST00000489037 UPK1BO75841 260 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms