RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 BAP18Q8IXM2 172 aa12.4□□□□□ -0.42
CLDN11-208ENST00000488989 SCGB1C1Q8TD33 95 aa12.4□□□□□ -0.42
CLDN11-208ENST00000488989 ST8SIA2Q92186 375 aa12.4□□□□□ -0.42
CLDN11-208ENST00000488989 TIMM9Q9Y5J7 89 aa12.4□□□□□ -0.42
CLDN11-208ENST00000488989 S4R3C0 116 aa12.4□□□□□ -0.42
CLDN11-208ENST00000488989 IGKV1-17P01599 117 aa12.39□□□□□ -0.43
CLDN11-208ENST00000488989 ATP6V0CP27449 155 aa12.39□□□□□ -0.43
CLDN11-208ENST00000488989 OR10J1P30954 320 aa12.39□□□□□ -0.43
CLDN11-208ENST00000488989 CDX1P47902 265 aaPredicted RBP12.39□□□□□ -0.43
CLDN11-208ENST00000488989 Q56UQ5 140 aa12.39□□□□□ -0.43
CLDN11-208ENST00000488989 PSMG3Q9BT73 122 aaPredicted RBP12.39□□□□□ -0.43
CLDN11-208ENST00000488989 GGTLC1Q9BX51 225 aa12.39□□□□□ -0.43
CLDN11-208ENST00000488989 NPCDR1Q9BY65 106 aa12.39□□□□□ -0.43
CLDN11-208ENST00000488989 SETD2Q9BYW2 2564 aaPredicted RBP12.39□□□□□ -0.43
CLDN11-208ENST00000488989 TCRBV4S1A1TA0A5B7 111 aa12.38□□□□□ -0.43
CLDN11-208ENST00000488989 ZFP92A6NM28 416 aa12.38□□□□□ -0.43
CLDN11-208ENST00000488989 AGPAT2O15120 278 aa12.38□□□□□ -0.43
CLDN11-208ENST00000488989 GNG7O60262 68 aa12.38□□□□□ -0.43
CLDN11-208ENST00000488989 IGHV3-23P01764 117 aa12.38□□□□□ -0.43
CLDN11-208ENST00000488989 CLEC3BP05452 202 aa12.38□□□□□ -0.43
CLDN11-208ENST00000488989 CTSGP08311 255 aa12.38□□□□□ -0.43
CLDN11-208ENST00000488989 SPP1P10451 314 aa12.38□□□□□ -0.43
CLDN11-208ENST00000488989 RPL29P47914 159 aaKnown RBP12.38□□□□□ -0.43
CLDN11-208ENST00000488989 CAMLGP49069 296 aa12.38□□□□□ -0.43
CLDN11-208ENST00000488989 RUNX1Q01196 453 aa12.38□□□□□ -0.43
CLDN11-208ENST00000488989 RAB31Q13636 194 aa12.38□□□□□ -0.43
CLDN11-208ENST00000488989 SPSB3Q6PJ21 355 aa12.38□□□□□ -0.43
CLDN11-208ENST00000488989 CYP2G1PQ6ZSU1 146 aa12.38□□□□□ -0.43
CLDN11-208ENST00000488989 HSD17B11Q8NBQ5 300 aa12.38□□□□□ -0.43
CLDN11-208ENST00000488989 GNPNAT1Q96EK6 184 aaPredicted RBP12.38□□□□□ -0.43
CLDN11-208ENST00000488989 RSG1Q9BU20 258 aa12.38□□□□□ -0.43
CLDN11-208ENST00000488989 SLC45A2Q9UMX9 530 aa12.38□□□□□ -0.43
CLDN11-208ENST00000488989 TGOLN2O43493 480 aa12.37□□□□□ -0.43
CLDN11-208ENST00000488989 SCGB2A1O75556 95 aa12.37□□□□□ -0.43
CLDN11-208ENST00000488989 IGHV3-11P01762 117 aa12.37□□□□□ -0.43
CLDN11-208ENST00000488989 LGALS1P09382 135 aaKnown RBP12.37□□□□□ -0.43
CLDN11-208ENST00000488989 SEC11BP0C7V7 166 aa12.37□□□□□ -0.43
CLDN11-208ENST00000488989 GPR183P32249 361 aa12.37□□□□□ -0.43
CLDN11-208ENST00000488989 ADMP35318 185 aa12.37□□□□□ -0.43
CLDN11-208ENST00000488989 YPEL3P61236 119 aaPredicted RBP12.37□□□□□ -0.43
CLDN11-208ENST00000488989 SELENOTP62341 195 aa12.37□□□□□ -0.43
CLDN11-208ENST00000488989 PRR20EP86478 221 aa12.37□□□□□ -0.43
CLDN11-208ENST00000488989 PRR20CP86479 221 aa12.37□□□□□ -0.43
CLDN11-208ENST00000488989 PRR20DP86480 221 aa12.37□□□□□ -0.43
CLDN11-208ENST00000488989 PRR20BP86481 221 aa12.37□□□□□ -0.43
CLDN11-208ENST00000488989 PRR20AP86496 221 aa12.37□□□□□ -0.43
CLDN11-208ENST00000488989 KRTAP24-1Q3LI83 254 aa12.37□□□□□ -0.43
CLDN11-208ENST00000488989 CLEC19AQ6UXS0 136 aa12.37□□□□□ -0.43
CLDN11-208ENST00000488989 OR2G3Q8NGZ4 309 aa12.37□□□□□ -0.43
CLDN11-208ENST00000488989 ZNF414Q96IQ9 312 aa12.37□□□□□ -0.43
CLDN11-208ENST00000488989 GNB4Q9HAV0 340 aa12.37□□□□□ -0.43
CLDN11-208ENST00000488989 OR2T8A6NH00 312 aa12.36□□□□□ -0.43
CLDN11-208ENST00000488989 C17orf112F2Z3M2 114 aa12.36□□□□□ -0.43
CLDN11-208ENST00000488989 I3L521 148 aa12.36□□□□□ -0.43
CLDN11-208ENST00000488989 HAX1O00165 279 aa12.36□□□□□ -0.43
CLDN11-208ENST00000488989 NUPL2O15504 423 aaKnown RBP12.36□□□□□ -0.43
CLDN11-208ENST00000488989 CD28P10747 220 aa12.36□□□□□ -0.43
CLDN11-208ENST00000488989 SERF2P84101 59 aa12.36□□□□□ -0.43
CLDN11-208ENST00000488989 TIGITQ495A1 244 aa12.36□□□□□ -0.43
CLDN11-208ENST00000488989 ZNF709Q8N972 641 aa12.36□□□□□ -0.43
CLDN11-208ENST00000488989 PHYHIPLQ96FC7 376 aa12.36□□□□□ -0.43
CLDN11-208ENST00000488989 CHRDL1Q9BU40 450 aa12.36□□□□□ -0.43
CLDN11-208ENST00000488989 KCNIP2Q9NS61 270 aa12.36□□□□□ -0.43
CLDN11-208ENST00000488989 TOMM40O96008 361 aa12.35□□□□□ -0.43
CLDN11-208ENST00000488989 CFDP00746 253 aaPredicted RBP12.35□□□□□ -0.43
CLDN11-208ENST00000488989 TRBV12-3P01733 135 aa12.35□□□□□ -0.43
CLDN11-208ENST00000488989 FABP1P07148 127 aa12.35□□□□□ -0.43
CLDN11-208ENST00000488989 LINC00869P0C866 280 aa12.35□□□□□ -0.43
CLDN11-208ENST00000488989 KRTAP10-3P60369 221 aa12.35□□□□□ -0.43
CLDN11-208ENST00000488989 ZNF90Q03938 601 aa12.35□□□□□ -0.43
CLDN11-208ENST00000488989 TMEM182Q6ZP80 229 aaPredicted RBP12.35□□□□□ -0.43
CLDN11-208ENST00000488989 C4orf3Q8WVX3 66 aa12.35□□□□□ -0.43
CLDN11-208ENST00000488989 SH3BGRL3Q9H299 93 aa12.35□□□□□ -0.43
CLDN11-208ENST00000488989 SLC25A32Q9H2D1 315 aa12.35□□□□□ -0.43
CLDN11-208ENST00000488989 PEF1Q9UBV8 284 aaKnown RBP12.35□□□□□ -0.43
CLDN11-208ENST00000488989 TSSC4Q9Y5U2 329 aaPredicted RBP12.35□□□□□ -0.43
CLDN11-208ENST00000488989 RFNGQ9Y644 331 aa12.35□□□□□ -0.43
CLDN11-208ENST00000488989 ARL3P36405 182 aa12.34□□□□□ -0.43
CLDN11-208ENST00000488989 PLP1P60201 277 aa12.34□□□□□ -0.43
CLDN11-208ENST00000488989 AWAT1Q58HT5 328 aa12.34□□□□□ -0.43
CLDN11-208ENST00000488989 MIC13Q5XKP0 118 aa12.34□□□□□ -0.43
CLDN11-208ENST00000488989 EIF5AL1Q6IS14 154 aaKnown RBP12.34□□□□□ -0.43
CLDN11-208ENST00000488989 TEX261Q6UWH6 196 aa12.34□□□□□ -0.43
CLDN11-208ENST00000488989 ZNF600Q6ZNG1 722 aa12.34□□□□□ -0.43
CLDN11-208ENST00000488989 STPG3Q8N7X2 389 aa12.34□□□□□ -0.43
CLDN11-208ENST00000488989 PXMP4Q9Y6I8 212 aa12.34□□□□□ -0.43
CLDN11-208ENST00000488989 BMPR1BO00238 502 aa12.33□□□□□ -0.44
CLDN11-208ENST00000488989 OR2C1O95371 312 aa12.33□□□□□ -0.44
CLDN11-208ENST00000488989 TSPAN15O95858 294 aa12.33□□□□□ -0.44
CLDN11-208ENST00000488989 PSG1P11464 419 aa12.33□□□□□ -0.44
CLDN11-208ENST00000488989 GATA2P23769 480 aaPredicted RBP12.33□□□□□ -0.44
CLDN11-208ENST00000488989 B2MP61769 119 aa12.33□□□□□ -0.44
CLDN11-208ENST00000488989 IFITM2Q01629 132 aa12.33□□□□□ -0.44
CLDN11-208ENST00000488989 ZNF616Q08AN1 781 aa12.33□□□□□ -0.44
CLDN11-208ENST00000488989 BPIFCQ8NFQ6 507 aa12.33□□□□□ -0.44
CLDN11-208ENST00000488989 TMED6Q8WW62 240 aa12.33□□□□□ -0.44
CLDN11-208ENST00000488989 CITED2Q99967 270 aaPredicted RBP12.33□□□□□ -0.44
CLDN11-208ENST00000488989 SLC39A9Q9NUM3 307 aa12.33□□□□□ -0.44
CLDN11-208ENST00000488989 PLA2G2EQ9NZK7 142 aa12.33□□□□□ -0.44
CLDN11-208ENST00000488989 ATRQ13535 2644 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms