RNA–Protein interactions for RNA: ENST00000488966.1

YIPF3-207, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-207ENST00000488966 IGKV3-20P01619 116 aa7.66□□□□□ -1.18
YIPF3-207ENST00000488966 HNRNPCP07910 306 aaKnown RBP eCLIP7.66□□□□□ -1.18
YIPF3-207ENST00000488966 HLA-DRB4P13762 266 aa7.66□□□□□ -1.18
YIPF3-207ENST00000488966 PGAM2P15259 253 aa7.66□□□□□ -1.18
YIPF3-207ENST00000488966 RND2P52198 227 aa7.66□□□□□ -1.18
YIPF3-207ENST00000488966 PIGPP57054 158 aa7.66□□□□□ -1.18
YIPF3-207ENST00000488966 FXYD7P58549 80 aa7.66□□□□□ -1.18
YIPF3-207ENST00000488966 DEFB1P60022 68 aa7.66□□□□□ -1.18
YIPF3-207ENST00000488966 RND3P61587 244 aa7.66□□□□□ -1.18
YIPF3-207ENST00000488966 SNRPD3P62318 126 aaKnown RBP7.66□□□□□ -1.18
YIPF3-207ENST00000488966 DHODHQ02127 395 aa7.66□□□□□ -1.18
YIPF3-207ENST00000488966 USF2Q15853 346 aaPredicted RBP7.66□□□□□ -1.18
YIPF3-207ENST00000488966 C1orf134Q5TEV5 83 aa7.66□□□□□ -1.18
YIPF3-207ENST00000488966 GDF5OSQ5U4N7 250 aa7.66□□□□□ -1.18
YIPF3-207ENST00000488966 OR1S2Q8NGQ3 325 aa7.66□□□□□ -1.18
YIPF3-207ENST00000488966 Q8WTZ3 238 aa7.66□□□□□ -1.18
YIPF3-207ENST00000488966 ENY2Q9NPA8 101 aa7.66□□□□□ -1.18
YIPF3-207ENST00000488966 NRN1Q9NPD7 142 aa7.66□□□□□ -1.18
YIPF3-207ENST00000488966 DKK2Q9UBU2 259 aa7.66□□□□□ -1.18
YIPF3-207ENST00000488966 HLA-DRB4X5D2U9 266 aa7.66□□□□□ -1.18
YIPF3-207ENST00000488966 TMEM189A5PLL7 270 aa7.65□□□□□ -1.18
YIPF3-207ENST00000488966 SMIM9A6NGZ8 99 aa7.65□□□□□ -1.18
YIPF3-207ENST00000488966 HTN3P15516 51 aa7.65□□□□□ -1.18
YIPF3-207ENST00000488966 OR10J1P30954 320 aa7.65□□□□□ -1.18
YIPF3-207ENST00000488966 RCVRNP35243 200 aa7.65□□□□□ -1.18
YIPF3-207ENST00000488966 SP6Q3SY56 376 aa7.65□□□□□ -1.18
YIPF3-207ENST00000488966 RNF212Q495C1 297 aa7.65□□□□□ -1.18
YIPF3-207ENST00000488966 FAM222AQ5U5X8 452 aa7.65□□□□□ -1.18
YIPF3-207ENST00000488966 PRSS54Q6PEW0 395 aa7.65□□□□□ -1.18
YIPF3-207ENST00000488966 SNX29P2Q8IUI4 249 aa7.65□□□□□ -1.18
YIPF3-207ENST00000488966 NIPSNAP3BQ9BS92 247 aa7.65□□□□□ -1.18
YIPF3-207ENST00000488966 YTHDF1Q9BYJ9 559 aaKnown RBP7.65□□□□□ -1.18
YIPF3-207ENST00000488966 SEPSECSQ9HD40 501 aaKnown RBP7.65□□□□□ -1.18
YIPF3-207ENST00000488966 HSPG2P98160 4391 aa7.64□□□□□ -1.19
YIPF3-207ENST00000488966 C3orf85A0A1B0GTC6 90 aa7.64□□□□□ -1.19
YIPF3-207ENST00000488966 RPS10-NUDT3A0A1W2PQS6 291 aa7.64□□□□□ -1.19
YIPF3-207ENST00000488966 C16orf90A8MZG2 172 aa7.64□□□□□ -1.19
YIPF3-207ENST00000488966 BUB3O43684 328 aa7.64□□□□□ -1.19
YIPF3-207ENST00000488966 IL4P05112 153 aa7.64□□□□□ -1.19
YIPF3-207ENST00000488966 YPEL3P61236 119 aaPredicted RBP7.64□□□□□ -1.19
YIPF3-207ENST00000488966 TNP2Q05952 138 aa7.64□□□□□ -1.19
YIPF3-207ENST00000488966 TRIM16LQ309B1 348 aa7.64□□□□□ -1.19
YIPF3-207ENST00000488966 SIGLEC15Q6ZMC9 328 aa7.64□□□□□ -1.19
YIPF3-207ENST00000488966 LHFPL1Q86WI0 220 aa7.64□□□□□ -1.19
YIPF3-207ENST00000488966 ZNF709Q8N972 641 aa7.64□□□□□ -1.19
YIPF3-207ENST00000488966 RRNAD1Q96FB5 475 aaKnown RBP7.64□□□□□ -1.19
YIPF3-207ENST00000488966 SCPEP1Q9HB40 452 aa7.64□□□□□ -1.19
YIPF3-207ENST00000488966 RFNGQ9Y644 331 aa7.64□□□□□ -1.19
YIPF3-207ENST00000488966 CDK2AP2O75956 126 aa7.63□□□□□ -1.19
YIPF3-207ENST00000488966 ATG12O94817 140 aa7.63□□□□□ -1.19
YIPF3-207ENST00000488966 NXPH3O95157 252 aa7.63□□□□□ -1.19
YIPF3-207ENST00000488966 HTR2BP41595 481 aa7.63□□□□□ -1.19
YIPF3-207ENST00000488966 NKX2-1P43699 371 aaPredicted RBP7.63□□□□□ -1.19
YIPF3-207ENST00000488966 SPCS3P61009 180 aa7.63□□□□□ -1.19
YIPF3-207ENST00000488966 LSM3P62310 102 aaKnown RBP7.63□□□□□ -1.19
YIPF3-207ENST00000488966 AARDQ4LEZ3 155 aa7.63□□□□□ -1.19
YIPF3-207ENST00000488966 TMEM88Q6PEY1 159 aa7.63□□□□□ -1.19
YIPF3-207ENST00000488966 MAPKAPK5-AS1Q8N8E1 139 aa7.63□□□□□ -1.19
YIPF3-207ENST00000488966 RNASE11Q8TAA1 199 aaKnown RBP7.63□□□□□ -1.19
YIPF3-207ENST00000488966 TMEM170AQ8WVE7 144 aa7.63□□□□□ -1.19
YIPF3-207ENST00000488966 NPIPB3Q92617 1050 aa7.63□□□□□ -1.19
YIPF3-207ENST00000488966 ZNF486Q96H40 463 aaPredicted RBP7.63□□□□□ -1.19
YIPF3-207ENST00000488966 LINC00052Q96N35 136 aa7.63□□□□□ -1.19
YIPF3-207ENST00000488966 WDR12Q9GZL7 423 aaKnown RBP7.63□□□□□ -1.19
YIPF3-207ENST00000488966 COMMD3Q9UBI1 195 aa7.63□□□□□ -1.19
YIPF3-207ENST00000488966 TEX48A0A1B0GUV7 120 aa7.62□□□□□ -1.19
YIPF3-207ENST00000488966 SMIM31A0A1B0GVY4 71 aa7.62□□□□□ -1.19
YIPF3-207ENST00000488966 TOMM40O96008 361 aa7.62□□□□□ -1.19
YIPF3-207ENST00000488966 APOA1P02647 267 aa7.62□□□□□ -1.19
YIPF3-207ENST00000488966 RD3LP0DJH9 198 aa7.62□□□□□ -1.19
YIPF3-207ENST00000488966 SLC25A4P12235 298 aa7.62□□□□□ -1.19
YIPF3-207ENST00000488966 UCP1P25874 307 aa7.62□□□□□ -1.19
YIPF3-207ENST00000488966 OXA1LQ15070 435 aa7.62□□□□□ -1.19
YIPF3-207ENST00000488966 C2orf83Q53S99 150 aa7.62□□□□□ -1.19
YIPF3-207ENST00000488966 RNASE12Q5GAN4 147 aaKnown RBP7.62□□□□□ -1.19
YIPF3-207ENST00000488966 GSG1LQ6UXU4 331 aa7.62□□□□□ -1.19
YIPF3-207ENST00000488966 C1orf158Q8N1D5 194 aa7.62□□□□□ -1.19
YIPF3-207ENST00000488966 SLC24A4Q8NFF2 622 aa7.62□□□□□ -1.19
YIPF3-207ENST00000488966 OR52E5Q8NH55 327 aa7.62□□□□□ -1.19
YIPF3-207ENST00000488966 RNASEH2CQ8TDP1 164 aaKnown RBP7.62□□□□□ -1.19
YIPF3-207ENST00000488966 SLC35B3Q9H1N7 401 aa7.62□□□□□ -1.19
YIPF3-207ENST00000488966 SAV1Q9H4B6 383 aaPredicted RBP7.62□□□□□ -1.19
YIPF3-207ENST00000488966 Q9H521 79 aa7.62□□□□□ -1.19
YIPF3-207ENST00000488966 HEYLQ9NQ87 328 aaPredicted RBP7.62□□□□□ -1.19
YIPF3-207ENST00000488966 YTHDF2Q9Y5A9 579 aaKnown RBP7.62□□□□□ -1.19
YIPF3-207ENST00000488966 LOC102723971A0A1B0GUV8 181 aa7.61□□□□□ -1.19
YIPF3-207ENST00000488966 GSTZ1O43708 216 aaPredicted RBP7.61□□□□□ -1.19
YIPF3-207ENST00000488966 PSG1P11464 419 aa7.61□□□□□ -1.19
YIPF3-207ENST00000488966 ELK1P19419 428 aa7.61□□□□□ -1.19
YIPF3-207ENST00000488966 RNASE10Q5GAN6 216 aaKnown RBP7.61□□□□□ -1.19
YIPF3-207ENST00000488966 FOXI2Q6ZQN5 318 aa7.61□□□□□ -1.19
YIPF3-207ENST00000488966 OR4B1Q8NGF8 309 aa7.61□□□□□ -1.19
YIPF3-207ENST00000488966 OR51G1Q8NGK1 321 aa7.61□□□□□ -1.19
YIPF3-207ENST00000488966 OR13C8Q8NGS7 320 aa7.61□□□□□ -1.19
YIPF3-207ENST00000488966 YIPF6Q96EC8 236 aa7.61□□□□□ -1.19
YIPF3-207ENST00000488966 ACY3Q96HD9 319 aa7.61□□□□□ -1.19
YIPF3-207ENST00000488966 CLUHP3Q96NS8 147 aa7.61□□□□□ -1.19
YIPF3-207ENST00000488966 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.61□□□□□ -1.19
YIPF3-207ENST00000488966 COPZ2Q9P299 210 aa7.61□□□□□ -1.19
YIPF3-207ENST00000488966 KLK11Q9UBX7 282 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms