RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 TIGITQ495A1 244 aa9.5□□□□□ -0.89
TRAIP-209ENST00000488860 FAM209BQ5JX69 171 aa9.5□□□□□ -0.89
TRAIP-209ENST00000488860 OR11H1Q8NG94 326 aa9.5□□□□□ -0.89
TRAIP-209ENST00000488860 TXN2Q99757 166 aa9.5□□□□□ -0.89
TRAIP-209ENST00000488860 ATP5SQ99766 215 aa9.5□□□□□ -0.89
TRAIP-209ENST00000488860 GGACTQ9BVM4 153 aa9.5□□□□□ -0.89
TRAIP-209ENST00000488860 HMSDA8MTL9 139 aa9.49□□□□□ -0.89
TRAIP-209ENST00000488860 LINC01619G3V211 115 aa9.49□□□□□ -0.89
TRAIP-209ENST00000488860 DFFBO76075 338 aa9.49□□□□□ -0.89
TRAIP-209ENST00000488860 PF4P02776 101 aa9.49□□□□□ -0.89
TRAIP-209ENST00000488860 FGF7P21781 194 aa9.49□□□□□ -0.89
TRAIP-209ENST00000488860 SLURP1P55000 103 aa9.49□□□□□ -0.89
TRAIP-209ENST00000488860 RUNX1Q01196 453 aa9.49□□□□□ -0.89
TRAIP-209ENST00000488860 ZNF616Q08AN1 781 aa9.49□□□□□ -0.89
TRAIP-209ENST00000488860 ATP6V1FQ16864 119 aa9.49□□□□□ -0.89
TRAIP-209ENST00000488860 RPEL1Q2QD12 228 aa9.49□□□□□ -0.89
TRAIP-209ENST00000488860 TMEM116Q8NCL8 245 aa9.49□□□□□ -0.89
TRAIP-209ENST00000488860 OR1N2Q8NGR9 330 aa9.49□□□□□ -0.89
TRAIP-209ENST00000488860 RAX2Q96IS3 184 aa9.49□□□□□ -0.89
TRAIP-209ENST00000488860 CHRDL1Q9BU40 450 aa9.49□□□□□ -0.89
TRAIP-209ENST00000488860 TRAV30A0A087WSZ9 112 aa9.48□□□□□ -0.89
TRAIP-209ENST00000488860 FNDC10F2Z333 226 aa9.48□□□□□ -0.89
TRAIP-209ENST00000488860 CCL24O00175 119 aa9.48□□□□□ -0.89
TRAIP-209ENST00000488860 GGCTO75223 188 aaKnown RBP9.48□□□□□ -0.89
TRAIP-209ENST00000488860 IGLC1P0CG04 106 aa9.48□□□□□ -0.89
TRAIP-209ENST00000488860 CXCL2P19875 107 aa9.48□□□□□ -0.89
TRAIP-209ENST00000488860 FCGR2BP31994 310 aaPredicted RBP9.48□□□□□ -0.89
TRAIP-209ENST00000488860 OR2F1Q13607 317 aa9.48□□□□□ -0.89
TRAIP-209ENST00000488860 SPSB3Q6PJ21 355 aa9.48□□□□□ -0.89
TRAIP-209ENST00000488860 TREML4Q6UXN2 200 aa9.48□□□□□ -0.89
TRAIP-209ENST00000488860 TMEM144Q7Z5S9 345 aa9.48□□□□□ -0.89
TRAIP-209ENST00000488860 OR4F17Q8NGA8 305 aa9.48□□□□□ -0.89
TRAIP-209ENST00000488860 HYLS1Q96M11 299 aa9.48□□□□□ -0.89
TRAIP-209ENST00000488860 OR4F4Q96R69 305 aa9.48□□□□□ -0.89
TRAIP-209ENST00000488860 ATP6V0BQ99437 205 aa9.48□□□□□ -0.89
TRAIP-209ENST00000488860 WFDC1Q9HC57 220 aa9.48□□□□□ -0.89
TRAIP-209ENST00000488860 NPVFQ9HCQ7 196 aa9.48□□□□□ -0.89
TRAIP-209ENST00000488860 WNK1Q9H4A3 2382 aa9.48□□□□□ -0.89
TRAIP-209ENST00000488860 IGKV1D-37A0A075B6S9 117 aa9.47□□□□□ -0.89
TRAIP-209ENST00000488860 IGKV1OR2-108A0A075B7D4 117 aa9.47□□□□□ -0.89
TRAIP-209ENST00000488860 YIF1AO95070 293 aa9.47□□□□□ -0.89
TRAIP-209ENST00000488860 OR2C1O95371 312 aa9.47□□□□□ -0.89
TRAIP-209ENST00000488860 TSPAN15O95858 294 aa9.47□□□□□ -0.89
TRAIP-209ENST00000488860 IFNA5P01569 189 aa9.47□□□□□ -0.89
TRAIP-209ENST00000488860 CTSGP08311 255 aa9.47□□□□□ -0.89
TRAIP-209ENST00000488860 ZP3P21754 424 aa9.47□□□□□ -0.89
TRAIP-209ENST00000488860 HOXD3P31249 432 aaPredicted RBP9.47□□□□□ -0.89
TRAIP-209ENST00000488860 ADMP35318 185 aa9.47□□□□□ -0.89
TRAIP-209ENST00000488860 NKX2-5P52952 324 aaPredicted RBP9.47□□□□□ -0.89
TRAIP-209ENST00000488860 RELQ04864 619 aaPredicted RBP9.47□□□□□ -0.89
TRAIP-209ENST00000488860 ZNF345Q14585 488 aa9.47□□□□□ -0.89
TRAIP-209ENST00000488860 VWC2Q2TAL6 325 aa9.47□□□□□ -0.89
TRAIP-209ENST00000488860 TEPPQ6URK8 271 aa9.47□□□□□ -0.89
TRAIP-209ENST00000488860 BTNL8Q6UX41 500 aa9.47□□□□□ -0.89
TRAIP-209ENST00000488860 THAP8Q8NA92 274 aa9.47□□□□□ -0.89
TRAIP-209ENST00000488860 ARL6Q9H0F7 186 aa9.47□□□□□ -0.89
TRAIP-209ENST00000488860 COL6A5A8TX70 2615 aa9.47□□□□□ -0.89
TRAIP-209ENST00000488860 IGHV3OR16-8A0A075B7F1 116 aa9.46□□□□□ -0.9
TRAIP-209ENST00000488860 A0A0D9SG52 128 aa9.46□□□□□ -0.9
TRAIP-209ENST00000488860 KANTRA0A1W2PQU2 76 aa9.46□□□□□ -0.9
TRAIP-209ENST00000488860 BOLA2-SMG1P6H3BVE0 249 aa9.46□□□□□ -0.9
TRAIP-209ENST00000488860 M0QZ24 198 aa9.46□□□□□ -0.9
TRAIP-209ENST00000488860 IGKV1-17P01599 117 aa9.46□□□□□ -0.9
TRAIP-209ENST00000488860 FABP1P07148 127 aa9.46□□□□□ -0.9
TRAIP-209ENST00000488860 MYCNOSP40205 109 aa9.46□□□□□ -0.9
TRAIP-209ENST00000488860 SYNJ2BPP57105 145 aa9.46□□□□□ -0.9
TRAIP-209ENST00000488860 ZNF90Q03938 601 aa9.46□□□□□ -0.9
TRAIP-209ENST00000488860 ZNF600Q6ZNG1 722 aa9.46□□□□□ -0.9
TRAIP-209ENST00000488860 CYP2G1PQ6ZSU1 146 aa9.46□□□□□ -0.9
TRAIP-209ENST00000488860 KCNRGQ8N5I3 272 aa9.46□□□□□ -0.9
TRAIP-209ENST00000488860 SCGB1C1Q8TD33 95 aa9.46□□□□□ -0.9
TRAIP-209ENST00000488860 TRGV9Q99603 122 aa9.46□□□□□ -0.9
TRAIP-209ENST00000488860 MGST2Q99735 147 aa9.46□□□□□ -0.9
TRAIP-209ENST00000488860 ARPC5LQ9BPX5 153 aa9.46□□□□□ -0.9
TRAIP-209ENST00000488860 C20orf24Q9BUV8 137 aa9.46□□□□□ -0.9
TRAIP-209ENST00000488860 WDR83OSQ9Y284 106 aa9.46□□□□□ -0.9
TRAIP-209ENST00000488860 ANK2Q01484 3957 aa9.46□□□□□ -0.9
TRAIP-209ENST00000488860 STAB1Q9NY15 2570 aa9.45□□□□□ -0.9
TRAIP-209ENST00000488860 BORCS7-ASMTA0A0B4J1R7 106 aa9.45□□□□□ -0.9
TRAIP-209ENST00000488860 ZNF320A2RRD8 509 aa9.45□□□□□ -0.9
TRAIP-209ENST00000488860 AGPAT2O15120 278 aa9.45□□□□□ -0.9
TRAIP-209ENST00000488860 BCL2L11O43521 198 aa9.45□□□□□ -0.9
TRAIP-209ENST00000488860 TOMM40O96008 361 aa9.45□□□□□ -0.9
TRAIP-209ENST00000488860 GATA2P23769 480 aaPredicted RBP9.45□□□□□ -0.9
TRAIP-209ENST00000488860 CAMLGP49069 296 aa9.45□□□□□ -0.9
TRAIP-209ENST00000488860 RAB31Q13636 194 aa9.45□□□□□ -0.9
TRAIP-209ENST00000488860 FHL3Q13643 280 aa9.45□□□□□ -0.9
TRAIP-209ENST00000488860 ZNF266Q14584 549 aa9.45□□□□□ -0.9
TRAIP-209ENST00000488860 TMUB2Q71RG4 321 aa9.45□□□□□ -0.9
TRAIP-209ENST00000488860 GGTLC1Q9BX51 225 aa9.45□□□□□ -0.9
TRAIP-209ENST00000488860 WDR61Q9GZS3 305 aaKnown RBP9.45□□□□□ -0.9
TRAIP-209ENST00000488860 PUS1Q9Y606 427 aaKnown RBP eCLIP9.45□□□□□ -0.9
TRAIP-209ENST00000488860 NDUFA4O00483 81 aa9.44□□□□□ -0.9
TRAIP-209ENST00000488860 TAAR5O14804 337 aa9.44□□□□□ -0.9
TRAIP-209ENST00000488860 ZNF207O43670 478 aaKnown RBP9.44□□□□□ -0.9
TRAIP-209ENST00000488860 MPDU1O75352 247 aa9.44□□□□□ -0.9
TRAIP-209ENST00000488860 IL4P05112 153 aa9.44□□□□□ -0.9
TRAIP-209ENST00000488860 RD3LP0DJH9 198 aa9.44□□□□□ -0.9
TRAIP-209ENST00000488860 PSG1P11464 419 aa9.44□□□□□ -0.9
TRAIP-209ENST00000488860 YPEL3P61236 119 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms