RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 COX7A1P24310 79 aa10.2□□□□□ -0.78
CLIC4-202ENST00000488683 LOXP28300 417 aaPredicted RBP10.2□□□□□ -0.78
CLIC4-202ENST00000488683 MFAP2P55001 183 aa10.2□□□□□ -0.78
CLIC4-202ENST00000488683 TOMM20LQ6UXN7 152 aa10.2□□□□□ -0.78
CLIC4-202ENST00000488683 FAM19A2Q8N3H0 131 aa10.2□□□□□ -0.78
CLIC4-202ENST00000488683 DYNLRB1Q9NP97 96 aa10.2□□□□□ -0.78
CLIC4-202ENST00000488683 TMEM167BQ9NRX6 74 aa10.2□□□□□ -0.78
CLIC4-202ENST00000488683 SPTAN1Q13813 2472 aaKnown RBP10.2□□□□□ -0.78
CLIC4-202ENST00000488683 IGKV1D-37A0A075B6S9 117 aa10.2□□□□□ -0.78
CLIC4-202ENST00000488683 A0A1W2PN81 502 aa10.2□□□□□ -0.78
CLIC4-202ENST00000488683 DLL1O00548 723 aa10.2□□□□□ -0.78
CLIC4-202ENST00000488683 GPR6P46095 362 aaPredicted RBP10.2□□□□□ -0.78
CLIC4-202ENST00000488683 VN1R17PQ8TDU5 208 aa10.2□□□□□ -0.78
CLIC4-202ENST00000488683 ST6GALNAC6Q969X2 333 aa10.2□□□□□ -0.78
CLIC4-202ENST00000488683 SSBP4Q9BWG4 385 aaPredicted RBP10.2□□□□□ -0.78
CLIC4-202ENST00000488683 CHODLQ9H9P2 273 aa10.2□□□□□ -0.78
CLIC4-202ENST00000488683 GNB4Q9HAV0 340 aa10.2□□□□□ -0.78
CLIC4-202ENST00000488683 PAM16Q9Y3D7 125 aa10.2□□□□□ -0.78
CLIC4-202ENST00000488683 C22orf46C9J442 243 aa10.2□□□□□ -0.78
CLIC4-202ENST00000488683 MKRN2OSH3BPM6 223 aa10.2□□□□□ -0.78
CLIC4-202ENST00000488683 ISLRO14498 428 aa10.2□□□□□ -0.78
CLIC4-202ENST00000488683 NDUFB3O43676 98 aa10.2□□□□□ -0.78
CLIC4-202ENST00000488683 ZNF841Q6ZN19 808 aa10.2□□□□□ -0.78
CLIC4-202ENST00000488683 OR1B1Q8NGR6 318 aa10.2□□□□□ -0.78
CLIC4-202ENST00000488683 NAGKQ9UJ70 344 aa10.2□□□□□ -0.78
CLIC4-202ENST00000488683 COX7A2P2O60397 106 aa10.19□□□□□ -0.78
CLIC4-202ENST00000488683 PMCHP20382 165 aa10.19□□□□□ -0.78
CLIC4-202ENST00000488683 FOXC1Q12948 553 aa10.19□□□□□ -0.78
CLIC4-202ENST00000488683 TNXAQ16473 311 aa10.19□□□□□ -0.78
CLIC4-202ENST00000488683 MRGPRG-AS1Q2M3A8 158 aa10.19□□□□□ -0.78
CLIC4-202ENST00000488683 IBA57Q5T440 356 aaKnown RBP10.19□□□□□ -0.78
CLIC4-202ENST00000488683 TGIF2LXQ8IUE1 241 aa10.19□□□□□ -0.78
CLIC4-202ENST00000488683 OR4C13Q8NGP0 309 aa10.19□□□□□ -0.78
CLIC4-202ENST00000488683 TMEM167AQ8TBQ9 72 aa10.19□□□□□ -0.78
CLIC4-202ENST00000488683 JKAMPQ9P055 326 aa10.19□□□□□ -0.78
CLIC4-202ENST00000488683 LY96Q9Y6Y9 160 aa10.19□□□□□ -0.78
CLIC4-202ENST00000488683 C8orf88P0DMB2 117 aa10.19□□□□□ -0.78
CLIC4-202ENST00000488683 DLX6P56179 175 aa10.19□□□□□ -0.78
CLIC4-202ENST00000488683 ERHP84090 104 aaKnown RBP10.19□□□□□ -0.78
CLIC4-202ENST00000488683 RNASE6Q93091 150 aaKnown RBP10.19□□□□□ -0.78
CLIC4-202ENST00000488683 BTF3L4Q96K17 158 aa10.19□□□□□ -0.78
CLIC4-202ENST00000488683 ARL2-SNX15V9GYD0 113 aa10.19□□□□□ -0.78
CLIC4-202ENST00000488683 USF1P22415 310 aaPredicted RBP10.18□□□□□ -0.78
CLIC4-202ENST00000488683 SELENOTP62341 195 aa10.18□□□□□ -0.78
CLIC4-202ENST00000488683 LINC00305Q7Z4B0 112 aa10.18□□□□□ -0.78
CLIC4-202ENST00000488683 C11orf42Q8N5U0 333 aa10.18□□□□□ -0.78
CLIC4-202ENST00000488683 IGF2BP2-AS1Q96M15 143 aa10.18□□□□□ -0.78
CLIC4-202ENST00000488683 SAMD10Q9BYL1 202 aa10.18□□□□□ -0.78
CLIC4-202ENST00000488683 DNAJC4Q9NNZ3 241 aa10.18□□□□□ -0.78
CLIC4-202ENST00000488683 CSMD2Q7Z408 3487 aa10.18□□□□□ -0.78
CLIC4-202ENST00000488683 SHISA9B4DS77 424 aa10.18□□□□□ -0.78
CLIC4-202ENST00000488683 KRTDAPP60985 99 aa10.18□□□□□ -0.78
CLIC4-202ENST00000488683 CDSNQ15517 529 aa10.18□□□□□ -0.78
CLIC4-202ENST00000488683 TIGITQ495A1 244 aa10.18□□□□□ -0.78
CLIC4-202ENST00000488683 FBLN7Q53RD9 439 aa10.18□□□□□ -0.78
CLIC4-202ENST00000488683 LRRC10Q5BKY1 277 aa10.18□□□□□ -0.78
CLIC4-202ENST00000488683 C10orf113Q5VZT2 155 aa10.18□□□□□ -0.78
CLIC4-202ENST00000488683 ATOH7Q8N100 152 aa10.18□□□□□ -0.78
CLIC4-202ENST00000488683 PNKDQ8N490 385 aa10.18□□□□□ -0.78
CLIC4-202ENST00000488683 FAM90A27PA6NNH2 459 aa10.17□□□□□ -0.78
CLIC4-202ENST00000488683 SRIP30626 198 aa10.17□□□□□ -0.78
CLIC4-202ENST00000488683 TAS2R45P59539 299 aa10.17□□□□□ -0.78
CLIC4-202ENST00000488683 PDPNQ86YL7 162 aa10.17□□□□□ -0.78
CLIC4-202ENST00000488683 CACNG8Q8WXS5 425 aa10.17□□□□□ -0.78
CLIC4-202ENST00000488683 FBXL7Q9UJT9 491 aa10.17□□□□□ -0.78
CLIC4-202ENST00000488683 G0S2P27469 103 aa10.17□□□□□ -0.78
CLIC4-202ENST00000488683 CAMPP49913 170 aa10.17□□□□□ -0.78
CLIC4-202ENST00000488683 ATP5IP56385 69 aaPredicted RBP10.17□□□□□ -0.78
CLIC4-202ENST00000488683 SSTP61278 116 aa10.17□□□□□ -0.78
CLIC4-202ENST00000488683 SLAQ13239 276 aa10.17□□□□□ -0.78
CLIC4-202ENST00000488683 ZNF705AQ6ZN79 300 aaPredicted RBP10.17□□□□□ -0.78
CLIC4-202ENST00000488683 PAXXQ9BUH6 204 aa10.17□□□□□ -0.78
CLIC4-202ENST00000488683 SNHG12Q9BXW3 62 aa10.17□□□□□ -0.78
CLIC4-202ENST00000488683 WASHC3Q9Y3C0 194 aa10.17□□□□□ -0.78
CLIC4-202ENST00000488683 A0A1W2PRE2 83 aa10.16□□□□□ -0.78
CLIC4-202ENST00000488683 NTF3P20783 257 aa10.16□□□□□ -0.78
CLIC4-202ENST00000488683 TMEM155Q4W5P6 130 aa10.16□□□□□ -0.78
CLIC4-202ENST00000488683 GDF5OSQ5U4N7 250 aa10.16□□□□□ -0.78
CLIC4-202ENST00000488683 TMEM136Q6ZRR5 245 aa10.16□□□□□ -0.78
CLIC4-202ENST00000488683 ZNF596Q8TC21 504 aa10.16□□□□□ -0.78
CLIC4-202ENST00000488683 TMEM186Q96B77 213 aa10.16□□□□□ -0.78
CLIC4-202ENST00000488683 AMMECR1Q9Y4X0 333 aaPredicted RBP10.16□□□□□ -0.78
CLIC4-202ENST00000488683 TRAV9-1A0A075B6T8 112 aa10.16□□□□□ -0.78
CLIC4-202ENST00000488683 TRAV8-1A0A0A6YYK1 113 aa10.16□□□□□ -0.78
CLIC4-202ENST00000488683 A6NNC1 897 aa10.16□□□□□ -0.78
CLIC4-202ENST00000488683 INS-IGF2F8WCM5 200 aa10.16□□□□□ -0.78
CLIC4-202ENST00000488683 M0QZ24 198 aa10.16□□□□□ -0.78
CLIC4-202ENST00000488683 FSTL3O95633 263 aa10.16□□□□□ -0.78
CLIC4-202ENST00000488683 IGHV1-8P0DP01 117 aa10.16□□□□□ -0.78
CLIC4-202ENST00000488683 PPOXP50336 477 aa10.16□□□□□ -0.78
CLIC4-202ENST00000488683 BATFQ16520 125 aa10.16□□□□□ -0.78
CLIC4-202ENST00000488683 LINC00322Q6ZN03 302 aaPredicted RBP10.16□□□□□ -0.78
CLIC4-202ENST00000488683 LINC00311Q8N616 119 aa10.16□□□□□ -0.78
CLIC4-202ENST00000488683 NDUFAF3Q9BU61 184 aa10.16□□□□□ -0.78
CLIC4-202ENST00000488683 C19orf24Q9BVV8 132 aa10.16□□□□□ -0.78
CLIC4-202ENST00000488683 FBXL15Q9H469 300 aa10.16□□□□□ -0.78
CLIC4-202ENST00000488683 MAJINQ3KP22 176 aa10.15□□□□□ -0.78
CLIC4-202ENST00000488683 ZNF329Q86UD4 541 aa10.15□□□□□ -0.78
CLIC4-202ENST00000488683 MRPL32Q9BYC8 188 aaKnown RBP10.15□□□□□ -0.78
CLIC4-202ENST00000488683 TCRBV4S1A1TA0A5B7 111 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms