RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 HTR2BP41595 481 aa13.65□□□□□ -0.22
GGPS1-206ENST00000488594 SOHLH1Q5JUK2 328 aa13.65□□□□□ -0.22
GGPS1-206ENST00000488594 SCRT1Q9BWW7 348 aa13.65□□□□□ -0.22
GGPS1-206ENST00000488594 NRN1Q9NPD7 142 aa13.65□□□□□ -0.22
GGPS1-206ENST00000488594 SMIM9A6NGZ8 99 aa13.64□□□□□ -0.23
GGPS1-206ENST00000488594 M0QYG6 137 aa13.64□□□□□ -0.23
GGPS1-206ENST00000488594 B3GALNT1O75752 331 aa13.64□□□□□ -0.23
GGPS1-206ENST00000488594 CD74P04233 296 aa13.64□□□□□ -0.23
GGPS1-206ENST00000488594 SPCS3P61009 180 aa13.64□□□□□ -0.23
GGPS1-206ENST00000488594 RNASE10Q5GAN6 216 aaKnown RBP13.64□□□□□ -0.23
GGPS1-206ENST00000488594 ZNF705AQ6ZN79 300 aaPredicted RBP13.64□□□□□ -0.23
GGPS1-206ENST00000488594 LHFPL1Q86WI0 220 aa13.64□□□□□ -0.23
GGPS1-206ENST00000488594 UBE2DNLQ8IWF7 75 aa13.64□□□□□ -0.23
GGPS1-206ENST00000488594 ARRDC1Q8N5I2 433 aa13.64□□□□□ -0.23
GGPS1-206ENST00000488594 OR52E5Q8NH55 327 aa13.64□□□□□ -0.23
GGPS1-206ENST00000488594 RNASE11Q8TAA1 199 aaKnown RBP13.64□□□□□ -0.23
GGPS1-206ENST00000488594 COMMD3Q9UBI1 195 aa13.64□□□□□ -0.23
GGPS1-206ENST00000488594 TEX48A0A1B0GUV7 120 aa13.63□□□□□ -0.23
GGPS1-206ENST00000488594 GSTZ1O43708 216 aaPredicted RBP13.63□□□□□ -0.23
GGPS1-206ENST00000488594 OR10J1P30954 320 aa13.63□□□□□ -0.23
GGPS1-206ENST00000488594 DHODHQ02127 395 aa13.63□□□□□ -0.23
GGPS1-206ENST00000488594 AARDQ4LEZ3 155 aa13.63□□□□□ -0.23
GGPS1-206ENST00000488594 PRSS54Q6PEW0 395 aa13.63□□□□□ -0.23
GGPS1-206ENST00000488594 CCDC71LQ8N9Z2 235 aa13.63□□□□□ -0.23
GGPS1-206ENST00000488594 RNASEH2CQ8TDP1 164 aaKnown RBP13.63□□□□□ -0.23
GGPS1-206ENST00000488594 COPZ2Q9P299 210 aa13.63□□□□□ -0.23
GGPS1-206ENST00000488594 ZNF705FA8MVS1 300 aaPredicted RBP13.62□□□□□ -0.23
GGPS1-206ENST00000488594 ZNF705DP0CH99 300 aaPredicted RBP13.62□□□□□ -0.23
GGPS1-206ENST00000488594 ZNF705BP0CI00 300 aaPredicted RBP13.62□□□□□ -0.23
GGPS1-206ENST00000488594 HLA-DRB4P13762 266 aa13.62□□□□□ -0.23
GGPS1-206ENST00000488594 UCP1P25874 307 aa13.62□□□□□ -0.23
GGPS1-206ENST00000488594 RND2P52198 227 aa13.62□□□□□ -0.23
GGPS1-206ENST00000488594 LSM3P62310 102 aaKnown RBP13.62□□□□□ -0.23
GGPS1-206ENST00000488594 Q6ZR54 194 aa13.62□□□□□ -0.23
GGPS1-206ENST00000488594 FAM219AQ8IW50 185 aa13.62□□□□□ -0.23
GGPS1-206ENST00000488594 HLA-DRB4X5D2U9 266 aa13.62□□□□□ -0.23
GGPS1-206ENST00000488594 BUB3O43684 328 aa13.61□□□□□ -0.23
GGPS1-206ENST00000488594 ATP6V1G2O95670 118 aa13.61□□□□□ -0.23
GGPS1-206ENST00000488594 IL4P05112 153 aa13.61□□□□□ -0.23
GGPS1-206ENST00000488594 TBPP20226 339 aa13.61□□□□□ -0.23
GGPS1-206ENST00000488594 NKX2-1P43699 371 aaPredicted RBP13.61□□□□□ -0.23
GGPS1-206ENST00000488594 USF2Q15853 346 aaPredicted RBP13.61□□□□□ -0.23
GGPS1-206ENST00000488594 SP6Q3SY56 376 aa13.61□□□□□ -0.23
GGPS1-206ENST00000488594 C2orf83Q53S99 150 aa13.61□□□□□ -0.23
GGPS1-206ENST00000488594 ETFRF1Q6IPR1 90 aa13.61□□□□□ -0.23
GGPS1-206ENST00000488594 SIGLEC15Q6ZMC9 328 aa13.61□□□□□ -0.23
GGPS1-206ENST00000488594 ZFAND1Q8TCF1 268 aa13.61□□□□□ -0.23
GGPS1-206ENST00000488594 YIPF6Q96EC8 236 aa13.61□□□□□ -0.23
GGPS1-206ENST00000488594 HEYLQ9NQ87 328 aaPredicted RBP13.61□□□□□ -0.23
GGPS1-206ENST00000488594 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.61□□□□□ -0.23
GGPS1-206ENST00000488594 MUC4Q99102 2169 aa13.61□□□□□ -0.23
GGPS1-206ENST00000488594 A0A0G2JRQ6 117 aa13.6□□□□□ -0.23
GGPS1-206ENST00000488594 EMP1P54849 157 aa13.6□□□□□ -0.23
GGPS1-206ENST00000488594 RNF212Q495C1 297 aa13.6□□□□□ -0.23
GGPS1-206ENST00000488594 Q6ZRM9 215 aa13.6□□□□□ -0.23
GGPS1-206ENST00000488594 RFNGQ9Y644 331 aa13.6□□□□□ -0.23
GGPS1-206ENST00000488594 IGLV2-18A0A075B6J9 118 aa13.59□□□□□ -0.23
GGPS1-206ENST00000488594 RD3LP0DJH9 198 aa13.59□□□□□ -0.23
GGPS1-206ENST00000488594 NUP62P37198 522 aaPredicted RBP13.59□□□□□ -0.23
GGPS1-206ENST00000488594 SLC24A4Q8NFF2 622 aa13.59□□□□□ -0.23
GGPS1-206ENST00000488594 VCX3AQ9NNX9 186 aa13.59□□□□□ -0.23
GGPS1-206ENST00000488594 TOMM40O96008 361 aa13.58□□□□□ -0.23
GGPS1-206ENST00000488594 ELK1P19419 428 aa13.58□□□□□ -0.23
GGPS1-206ENST00000488594 NOXA1Q86UR1 476 aa13.58□□□□□ -0.23
GGPS1-206ENST00000488594 TERB2Q8NHR7 220 aa13.58□□□□□ -0.23
GGPS1-206ENST00000488594 CLUHP3Q96NS8 147 aa13.58□□□□□ -0.23
GGPS1-206ENST00000488594 NIPSNAP3BQ9BS92 247 aa13.58□□□□□ -0.23
GGPS1-206ENST00000488594 DKK2Q9UBU2 259 aa13.58□□□□□ -0.23
GGPS1-206ENST00000488594 KLK11Q9UBX7 282 aa13.58□□□□□ -0.23
GGPS1-206ENST00000488594 CACFD1Q9UGQ2 172 aa13.58□□□□□ -0.23
GGPS1-206ENST00000488594 PFDN2Q9UHV9 154 aa13.58□□□□□ -0.23
GGPS1-206ENST00000488594 CDS2O95674 445 aa13.58□□□□□ -0.24
GGPS1-206ENST00000488594 CD3DP04234 171 aa13.58□□□□□ -0.24
GGPS1-206ENST00000488594 OXA1LQ15070 435 aa13.58□□□□□ -0.24
GGPS1-206ENST00000488594 OR13C8Q8NGS7 320 aa13.58□□□□□ -0.24
GGPS1-206ENST00000488594 NPIPB3Q92617 1050 aa13.58□□□□□ -0.24
GGPS1-206ENST00000488594 ABHD1Q96SE0 405 aa13.58□□□□□ -0.24
GGPS1-206ENST00000488594 TMEM222Q9H0R3 208 aa13.58□□□□□ -0.24
GGPS1-206ENST00000488594 DNAH17Q9UFH2 4485 aa13.57□□□□□ -0.24
GGPS1-206ENST00000488594 DNAH11Q96DT5 4516 aa13.57□□□□□ -0.24
GGPS1-206ENST00000488594 IGHV3OR16-12A0A075B7B8 117 aa13.57□□□□□ -0.24
GGPS1-206ENST00000488594 HPGDSO60760 199 aa13.57□□□□□ -0.24
GGPS1-206ENST00000488594 C1orf134Q5TEV5 83 aa13.57□□□□□ -0.24
GGPS1-206ENST00000488594 FAM222AQ5U5X8 452 aa13.57□□□□□ -0.24
GGPS1-206ENST00000488594 SAV1Q9H4B6 383 aaPredicted RBP13.57□□□□□ -0.24
GGPS1-206ENST00000488594 CEBPZOSA8MTT3 80 aa13.56□□□□□ -0.24
GGPS1-206ENST00000488594 ID1P41134 155 aa13.56□□□□□ -0.24
GGPS1-206ENST00000488594 SPATA31B1PQ5VZV4 182 aa13.56□□□□□ -0.24
GGPS1-206ENST00000488594 FOXI2Q6ZQN5 318 aa13.56□□□□□ -0.24
GGPS1-206ENST00000488594 ZNF575Q86XF7 245 aa13.56□□□□□ -0.24
GGPS1-206ENST00000488594 RBPMSQ93062 196 aaKnown RBP13.56□□□□□ -0.24
GGPS1-206ENST00000488594 ACY3Q96HD9 319 aa13.56□□□□□ -0.24
GGPS1-206ENST00000488594 MTFP1Q9UDX5 166 aa13.56□□□□□ -0.24
GGPS1-206ENST00000488594 CACNG5Q9UF02 275 aa13.56□□□□□ -0.24
GGPS1-206ENST00000488594 IGKV3-20P01619 116 aa13.55□□□□□ -0.24
GGPS1-206ENST00000488594 OR5AC1P0C628 307 aa13.55□□□□□ -0.24
GGPS1-206ENST00000488594 PSG1P11464 419 aa13.55□□□□□ -0.24
GGPS1-206ENST00000488594 SCGB2B2Q4G0G5 96 aa13.55□□□□□ -0.24
GGPS1-206ENST00000488594 RNASE12Q5GAN4 147 aaKnown RBP13.55□□□□□ -0.24
GGPS1-206ENST00000488594 GDF5OSQ5U4N7 250 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms