RNA–Protein interactions for RNA: ENST00000488069.5

CCDC12-205, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-205ENST00000488069 NOXA1Q86UR1 476 aa13.39□□□□□ -0.27
CCDC12-205ENST00000488069 LGI3Q8N145 548 aa13.39□□□□□ -0.27
CCDC12-205ENST00000488069 LILRB2Q8N423 598 aa13.39□□□□□ -0.27
CCDC12-205ENST00000488069 NARS2Q96I59 477 aaKnown RBP13.39□□□□□ -0.27
CCDC12-205ENST00000488069 MS4A6AQ9H2W1 248 aa13.39□□□□□ -0.27
CCDC12-205ENST00000488069 V9GYH0 126 aa13.39□□□□□ -0.27
CCDC12-205ENST00000488069 PIGBOS1A0A0B4J2F0 54 aa13.38□□□□□ -0.27
CCDC12-205ENST00000488069 RND2P52198 227 aa13.38□□□□□ -0.27
CCDC12-205ENST00000488069 TNFRSF9Q07011 255 aa13.38□□□□□ -0.27
CCDC12-205ENST00000488069 SMCO1Q147U7 214 aa13.38□□□□□ -0.27
CCDC12-205ENST00000488069 ZNF124Q15973 351 aa13.38□□□□□ -0.27
CCDC12-205ENST00000488069 ETFRF1Q6IPR1 90 aa13.38□□□□□ -0.27
CCDC12-205ENST00000488069 PRSS54Q6PEW0 395 aa13.38□□□□□ -0.27
CCDC12-205ENST00000488069 LYZL2Q7Z4W2 148 aa13.38□□□□□ -0.27
CCDC12-205ENST00000488069 OR1S2Q8NGQ3 325 aa13.38□□□□□ -0.27
CCDC12-205ENST00000488069 TRAV2A0A0B4J234 112 aa13.37□□□□□ -0.27
CCDC12-205ENST00000488069 IGLC1P0CG04 106 aa13.37□□□□□ -0.27
CCDC12-205ENST00000488069 CRYBB3P26998 211 aa13.37□□□□□ -0.27
CCDC12-205ENST00000488069 TMED4Q7Z7H5 227 aa13.37□□□□□ -0.27
CCDC12-205ENST00000488069 TMEM170AQ8WVE7 144 aa13.37□□□□□ -0.27
CCDC12-205ENST00000488069 RNF183Q96D59 192 aa13.37□□□□□ -0.27
CCDC12-205ENST00000488069 HSPB7Q9UBY9 170 aa13.37□□□□□ -0.27
CCDC12-205ENST00000488069 DNAH1Q9P2D7 4330 aa13.37□□□□□ -0.27
CCDC12-205ENST00000488069 A0A0J9YWU9 116 aa13.36□□□□□ -0.27
CCDC12-205ENST00000488069 IFNA10P01566 189 aa13.36□□□□□ -0.27
CCDC12-205ENST00000488069 OR10J1P30954 320 aa13.36□□□□□ -0.27
CCDC12-205ENST00000488069 ZNF79Q15937 498 aa13.36□□□□□ -0.27
CCDC12-205ENST00000488069 TMEM128Q5BJH2 165 aa13.36□□□□□ -0.27
CCDC12-205ENST00000488069 LYG2Q86SG7 212 aa13.36□□□□□ -0.27
CCDC12-205ENST00000488069 DTD1Q8TEA8 209 aa13.36□□□□□ -0.27
CCDC12-205ENST00000488069 Q8WTZ3 238 aa13.36□□□□□ -0.27
CCDC12-205ENST00000488069 DEDD2Q8WXF8 326 aa13.36□□□□□ -0.27
CCDC12-205ENST00000488069 GRAMD2BQ96HH9 432 aa13.36□□□□□ -0.27
CCDC12-205ENST00000488069 RBM38Q9H0Z9 239 aaKnown RBP13.36□□□□□ -0.27
CCDC12-205ENST00000488069 CSTL1Q9H114 145 aa13.36□□□□□ -0.27
CCDC12-205ENST00000488069 RABAC1Q9UI14 185 aa13.36□□□□□ -0.27
CCDC12-205ENST00000488069 U3KQ87 197 aa13.36□□□□□ -0.27
CCDC12-205ENST00000488069 DUXBA0A1W2PPF3 345 aa13.35□□□□□ -0.27
CCDC12-205ENST00000488069 JTBO76095 146 aa13.35□□□□□ -0.27
CCDC12-205ENST00000488069 P2RY1P47900 373 aa13.35□□□□□ -0.27
CCDC12-205ENST00000488069 YPEL3P61236 119 aaPredicted RBP13.35□□□□□ -0.27
CCDC12-205ENST00000488069 CCDC190Q86UF4 302 aa13.35□□□□□ -0.27
CCDC12-205ENST00000488069 OR1S1Q8NH92 325 aa13.35□□□□□ -0.27
CCDC12-205ENST00000488069 SLC25A21Q9BQT8 299 aaPredicted RBP13.35□□□□□ -0.27
CCDC12-205ENST00000488069 RBKSQ9H477 322 aa13.35□□□□□ -0.27
CCDC12-205ENST00000488069 MPTX1A8MV57 137 aa13.34□□□□□ -0.27
CCDC12-205ENST00000488069 ZNF701M0R085 212 aaPredicted RBP13.34□□□□□ -0.27
CCDC12-205ENST00000488069 VAMP1P23763 118 aa13.34□□□□□ -0.27
CCDC12-205ENST00000488069 DEFB131AP59861 70 aa13.34□□□□□ -0.27
CCDC12-205ENST00000488069 STXBP6Q8NFX7 210 aa13.34□□□□□ -0.27
CCDC12-205ENST00000488069 NPIPB3Q92617 1050 aa13.34□□□□□ -0.27
CCDC12-205ENST00000488069 ACY3Q96HD9 319 aa13.34□□□□□ -0.27
CCDC12-205ENST00000488069 EIF2B2P49770 351 aaKnown RBP13.33□□□□□ -0.28
CCDC12-205ENST00000488069 ATP5IP56385 69 aaPredicted RBP13.33□□□□□ -0.28
CCDC12-205ENST00000488069 RBMS2Q15434 407 aaKnown RBP13.33□□□□□ -0.28
CCDC12-205ENST00000488069 SPANXN2Q5MJ10 180 aa13.33□□□□□ -0.28
CCDC12-205ENST00000488069 ALMS1Q8TCU4 4167 aa13.32□□□□□ -0.28
CCDC12-205ENST00000488069 CXorf65A6NEN9 183 aa13.32□□□□□ -0.28
CCDC12-205ENST00000488069 IFNA4P05014 189 aa13.32□□□□□ -0.28
CCDC12-205ENST00000488069 HNRNPCP07910 306 aaKnown RBP eCLIP13.32□□□□□ -0.28
CCDC12-205ENST00000488069 LEMD1Q68G75 181 aa13.32□□□□□ -0.28
CCDC12-205ENST00000488069 FAM24BQ8N5W8 94 aa13.32□□□□□ -0.28
CCDC12-205ENST00000488069 TMEM217Q8N7C4 229 aa13.32□□□□□ -0.28
CCDC12-205ENST00000488069 GATAD1Q8WUU5 269 aa13.32□□□□□ -0.28
CCDC12-205ENST00000488069 U3KQE9 123 aa13.32□□□□□ -0.28
CCDC12-205ENST00000488069 HELTA6NFD8 242 aa13.31□□□□□ -0.28
CCDC12-205ENST00000488069 K7EQG2 157 aa13.31□□□□□ -0.28
CCDC12-205ENST00000488069 TOMM40O96008 361 aa13.31□□□□□ -0.28
CCDC12-205ENST00000488069 IL4P05112 153 aa13.31□□□□□ -0.28
CCDC12-205ENST00000488069 RD3LP0DJH9 198 aa13.31□□□□□ -0.28
CCDC12-205ENST00000488069 ATF4P18848 351 aaPredicted RBP13.31□□□□□ -0.28
CCDC12-205ENST00000488069 PMS2P11Q13670 270 aa13.31□□□□□ -0.28
CCDC12-205ENST00000488069 LRTM2Q8N967 370 aa13.31□□□□□ -0.28
CCDC12-205ENST00000488069 PITX3O75364 302 aa13.3□□□□□ -0.28
CCDC12-205ENST00000488069 CA1P00915 261 aaPredicted RBP13.3□□□□□ -0.28
CCDC12-205ENST00000488069 SLC25A6P12236 298 aa13.3□□□□□ -0.28
CCDC12-205ENST00000488069 AP2S1P53680 142 aaPredicted RBP13.3□□□□□ -0.28
CCDC12-205ENST00000488069 EWSR1Q01844 656 aaKnown RBP eCLIP13.3□□□□□ -0.285e-7■■■■□ 25.4
CCDC12-205ENST00000488069 USF2Q15853 346 aaPredicted RBP13.3□□□□□ -0.28
CCDC12-205ENST00000488069 STHQ8IWL8 128 aa13.3□□□□□ -0.28
CCDC12-205ENST00000488069 CENPSQ8N2Z9 138 aa13.3□□□□□ -0.28
CCDC12-205ENST00000488069 SRRQ9GZT4 340 aa13.3□□□□□ -0.28
CCDC12-205ENST00000488069 PLECQ15149 4684 aaKnown RBP13.29□□□□□ -0.28
CCDC12-205ENST00000488069 FAM90A26D6RGX4 464 aa13.29□□□□□ -0.28
CCDC12-205ENST00000488069 SFT2D2O95562 160 aa13.29□□□□□ -0.28
CCDC12-205ENST00000488069 ZNF688P0C7X2 276 aa13.29□□□□□ -0.28
CCDC12-205ENST00000488069 GPX4P36969 197 aaPredicted RBP13.29□□□□□ -0.28
CCDC12-205ENST00000488069 INPP1P49441 399 aa13.29□□□□□ -0.28
CCDC12-205ENST00000488069 PPP1R1AQ13522 171 aa13.29□□□□□ -0.28
CCDC12-205ENST00000488069 C16orf54Q6UWD8 224 aa13.29□□□□□ -0.28
CCDC12-205ENST00000488069 DCANP1Q8TF63 244 aa13.29□□□□□ -0.28
CCDC12-205ENST00000488069 GLMPQ8WWB7 406 aa13.29□□□□□ -0.28
CCDC12-205ENST00000488069 SLC35E1Q96K37 410 aa13.29□□□□□ -0.28
CCDC12-205ENST00000488069 RARRES2Q99969 163 aa13.29□□□□□ -0.28
CCDC12-205ENST00000488069 TMED3Q9Y3Q3 217 aa13.29□□□□□ -0.28
CCDC12-205ENST00000488069 NUPR2A6NF83 97 aa13.28□□□□□ -0.28
CCDC12-205ENST00000488069 MED6O75586 246 aa13.28□□□□□ -0.28
CCDC12-205ENST00000488069 PSG1P11464 419 aa13.28□□□□□ -0.28
CCDC12-205ENST00000488069 RAB11AP62491 216 aa13.28□□□□□ -0.28
CCDC12-205ENST00000488069 DHRS2Q13268 280 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms