RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 IGKV1-17P01599 117 aa10.18□□□□□ -0.78
COL4A6-207ENST00000487645 IGLC1P0CG04 106 aa10.18□□□□□ -0.78
COL4A6-207ENST00000487645 OR10J1P30954 320 aa10.18□□□□□ -0.78
COL4A6-207ENST00000487645 S100A11P31949 105 aa10.18□□□□□ -0.78
COL4A6-207ENST00000487645 YPEL3P61236 119 aaPredicted RBP10.18□□□□□ -0.78
COL4A6-207ENST00000487645 HBG1P69891 147 aa10.18□□□□□ -0.78
COL4A6-207ENST00000487645 HBG2P69892 147 aa10.18□□□□□ -0.78
COL4A6-207ENST00000487645 ARL16Q0P5N6 197 aa10.18□□□□□ -0.78
COL4A6-207ENST00000487645 ZNF600Q6ZNG1 722 aa10.18□□□□□ -0.78
COL4A6-207ENST00000487645 TMEM144Q7Z5S9 345 aa10.18□□□□□ -0.78
COL4A6-207ENST00000487645 STX12Q86Y82 276 aa10.18□□□□□ -0.78
COL4A6-207ENST00000487645 CHAC2Q8WUX2 184 aa10.18□□□□□ -0.78
COL4A6-207ENST00000487645 PEMTQ9UBM1 199 aa10.18□□□□□ -0.78
COL4A6-207ENST00000487645 NOTCH3Q9UM47 2321 aa10.17□□□□□ -0.78
COL4A6-207ENST00000487645 TRAV14DV4A0A0A6YYC5 116 aa10.17□□□□□ -0.78
COL4A6-207ENST00000487645 IGSF23A1L1A6 192 aa10.17□□□□□ -0.78
COL4A6-207ENST00000487645 CCNKO75909 580 aa10.17□□□□□ -0.78
COL4A6-207ENST00000487645 CST7O76096 145 aa10.17□□□□□ -0.78
COL4A6-207ENST00000487645 ELLP55199 621 aaPredicted RBP10.17□□□□□ -0.78
COL4A6-207ENST00000487645 BAXQ07812 192 aa10.17□□□□□ -0.78
COL4A6-207ENST00000487645 ATP6V1FQ16864 119 aa10.17□□□□□ -0.78
COL4A6-207ENST00000487645 HAPLN4Q86UW8 402 aa10.17□□□□□ -0.78
COL4A6-207ENST00000487645 THAP8Q8NA92 274 aa10.17□□□□□ -0.78
COL4A6-207ENST00000487645 OR9G4Q8NGQ1 327 aa10.17□□□□□ -0.78
COL4A6-207ENST00000487645 ELOVL1Q9BW60 279 aa10.17□□□□□ -0.78
COL4A6-207ENST00000487645 GPR61Q9BZJ8 451 aa10.17□□□□□ -0.78
COL4A6-207ENST00000487645 NPVFQ9HCQ7 196 aa10.17□□□□□ -0.78
COL4A6-207ENST00000487645 SIGLEC8Q9NYZ4 499 aa10.17□□□□□ -0.78
COL4A6-207ENST00000487645 MBD2Q9UBB5 411 aa10.17□□□□□ -0.78
COL4A6-207ENST00000487645 DNHD1Q96M86 4753 aa10.17□□□□□ -0.78
COL4A6-207ENST00000487645 CMYA5Q8N3K9 4069 aa10.17□□□□□ -0.78
COL4A6-207ENST00000487645 IGHV3-35A0A0C4DH35 117 aa10.16□□□□□ -0.78
COL4A6-207ENST00000487645 ZNF320A2RRD8 509 aa10.16□□□□□ -0.78
COL4A6-207ENST00000487645 K7EMT4 169 aa10.16□□□□□ -0.78
COL4A6-207ENST00000487645 FABP1P07148 127 aa10.16□□□□□ -0.78
COL4A6-207ENST00000487645 INSL3P51460 131 aa10.16□□□□□ -0.78
COL4A6-207ENST00000487645 SLC38A11Q08AI6 406 aa10.16□□□□□ -0.78
COL4A6-207ENST00000487645 TIGITQ495A1 244 aa10.16□□□□□ -0.78
COL4A6-207ENST00000487645 ACOT7LQ6ZUV0 252 aa10.16□□□□□ -0.78
COL4A6-207ENST00000487645 OR2T35Q8NGX2 323 aa10.16□□□□□ -0.78
COL4A6-207ENST00000487645 Q8WTZ3 238 aa10.16□□□□□ -0.78
COL4A6-207ENST00000487645 ZNF414Q96IQ9 312 aa10.16□□□□□ -0.78
COL4A6-207ENST00000487645 TRGV9Q99603 122 aa10.16□□□□□ -0.78
COL4A6-207ENST00000487645 UFC1Q9Y3C8 167 aa10.16□□□□□ -0.78
COL4A6-207ENST00000487645 IGKV1D-37A0A075B6S9 117 aa10.15□□□□□ -0.78
COL4A6-207ENST00000487645 ZFP92A6NM28 416 aa10.15□□□□□ -0.78
COL4A6-207ENST00000487645 A8MWP6 167 aa10.15□□□□□ -0.78
COL4A6-207ENST00000487645 SEC14L6B5MCN3 397 aa10.15□□□□□ -0.78
COL4A6-207ENST00000487645 RD3LP0DJH9 198 aa10.15□□□□□ -0.78
COL4A6-207ENST00000487645 RPL12P30050 165 aaKnown RBP10.15□□□□□ -0.78
COL4A6-207ENST00000487645 EWSR1Q01844 656 aaKnown RBP eCLIP10.15□□□□□ -0.78
COL4A6-207ENST00000487645 NHLH2Q02577 135 aa10.15□□□□□ -0.78
COL4A6-207ENST00000487645 AKR1C1Q04828 323 aa10.15□□□□□ -0.78
COL4A6-207ENST00000487645 Q5BKY6 102 aa10.15□□□□□ -0.78
COL4A6-207ENST00000487645 C9orf66Q5T8R8 295 aa10.15□□□□□ -0.78
COL4A6-207ENST00000487645 UNQ9165/PRO28630Q6UXU0 137 aa10.15□□□□□ -0.78
COL4A6-207ENST00000487645 IL34Q6ZMJ4 242 aa10.15□□□□□ -0.78
COL4A6-207ENST00000487645 TMEM217Q8N7C4 229 aa10.15□□□□□ -0.78
COL4A6-207ENST00000487645 TMEM190Q8WZ59 177 aa10.15□□□□□ -0.78
COL4A6-207ENST00000487645 IGKV1OR2-108A0A075B7D4 117 aa10.14□□□□□ -0.79
COL4A6-207ENST00000487645 WIPF1O43516 503 aa10.14□□□□□ -0.79
COL4A6-207ENST00000487645 YIF1AO95070 293 aa10.14□□□□□ -0.79
COL4A6-207ENST00000487645 TOMM40O96008 361 aa10.14□□□□□ -0.79
COL4A6-207ENST00000487645 CSN3P07498 182 aa10.14□□□□□ -0.79
COL4A6-207ENST00000487645 IGLL1P15814 213 aa10.14□□□□□ -0.79
COL4A6-207ENST00000487645 VWC2Q2TAL6 325 aa10.14□□□□□ -0.79
COL4A6-207ENST00000487645 TEPPQ6URK8 271 aa10.14□□□□□ -0.79
COL4A6-207ENST00000487645 TOMM20LQ6UXN7 152 aa10.14□□□□□ -0.79
COL4A6-207ENST00000487645 LILRB2Q8N423 598 aa10.14□□□□□ -0.79
COL4A6-207ENST00000487645 MARC2Q969Z3 335 aa10.14□□□□□ -0.79
COL4A6-207ENST00000487645 UQCC1Q9NVA1 299 aa10.14□□□□□ -0.79
COL4A6-207ENST00000487645 PUS1Q9Y606 427 aaKnown RBP eCLIP10.14□□□□□ -0.79
COL4A6-207ENST00000487645 SMCO3A2RU48 225 aa10.13□□□□□ -0.79
COL4A6-207ENST00000487645 C2orf70A6NJV1 201 aa10.13□□□□□ -0.79
COL4A6-207ENST00000487645 CFDP00746 253 aaPredicted RBP10.13□□□□□ -0.79
COL4A6-207ENST00000487645 C8orf88P0DMB2 117 aa10.13□□□□□ -0.79
COL4A6-207ENST00000487645 PSG1P11464 419 aa10.13□□□□□ -0.79
COL4A6-207ENST00000487645 CBLN1P23435 193 aa10.13□□□□□ -0.79
COL4A6-207ENST00000487645 NUP62P37198 522 aaPredicted RBP10.13□□□□□ -0.79
COL4A6-207ENST00000487645 ZNF546Q86UE3 836 aa10.13□□□□□ -0.79
COL4A6-207ENST00000487645 GINS3Q9BRX5 216 aa10.13□□□□□ -0.79
COL4A6-207ENST00000487645 C20orf24Q9BUV8 137 aa10.13□□□□□ -0.79
COL4A6-207ENST00000487645 TMEM147Q9BVK8 224 aa10.13□□□□□ -0.79
COL4A6-207ENST00000487645 ZFAND3Q9H8U3 227 aa10.13□□□□□ -0.79
COL4A6-207ENST00000487645 DAZ1Q9NQZ3 744 aaKnown RBP10.13□□□□□ -0.79
COL4A6-207ENST00000487645 MRPL27Q9P0M9 148 aaKnown RBP10.13□□□□□ -0.79
COL4A6-207ENST00000487645 LSM4Q9Y4Z0 139 aaKnown RBP10.13□□□□□ -0.79
COL4A6-207ENST00000487645 HSPB11Q9Y547 144 aa10.13□□□□□ -0.79
COL4A6-207ENST00000487645 SORL1Q92673 2214 aa10.13□□□□□ -0.79
COL4A6-207ENST00000487645 WI2-2373I1.2A0A1W2PRP0 233 aa10.12□□□□□ -0.79
COL4A6-207ENST00000487645 TMEM213A2RRL7 107 aa10.12□□□□□ -0.79
COL4A6-207ENST00000487645 G3V3Q6 166 aa10.12□□□□□ -0.79
COL4A6-207ENST00000487645 SAP30O75446 220 aa10.12□□□□□ -0.79
COL4A6-207ENST00000487645 FOLR2P14207 255 aa10.12□□□□□ -0.79
COL4A6-207ENST00000487645 SELENOTP62341 195 aa10.12□□□□□ -0.79
COL4A6-207ENST00000487645 ZNF90Q03938 601 aa10.12□□□□□ -0.79
COL4A6-207ENST00000487645 RAB31Q13636 194 aa10.12□□□□□ -0.79
COL4A6-207ENST00000487645 TM4SF20Q53R12 229 aa10.12□□□□□ -0.79
COL4A6-207ENST00000487645 OXLD1Q5BKU9 147 aa10.12□□□□□ -0.79
COL4A6-207ENST00000487645 INO80EQ8NBZ0 244 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms